RNA–Protein interactions for RNA: ENST00000634712.2

LINC00339-207, long intergenic non-protein coding RNA 339, humanhuman

TSL 5

Gene LINC00339, Length 1,388 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-207ENST00000634712 PKD2L1Q9P0L9 805 aa17.91■□□□□ 0.46
LINC00339-207ENST00000634712 LTBP2Q14767 1821 aa17.91■□□□□ 0.46
LINC00339-207ENST00000634712 PFKFB2O60825 505 aa17.91■□□□□ 0.46
LINC00339-207ENST00000634712 F2P00734 622 aa17.91■□□□□ 0.46
LINC00339-207ENST00000634712 CYP2C9P11712 490 aa17.91■□□□□ 0.46
LINC00339-207ENST00000634712 HOXD8P13378 290 aaPredicted RBP17.91■□□□□ 0.46
LINC00339-207ENST00000634712 SREBF1P36956 1147 aa17.91■□□□□ 0.46
LINC00339-207ENST00000634712 SCRN1Q12765 414 aa17.91■□□□□ 0.46
LINC00339-207ENST00000634712 SHHQ15465 462 aa17.91■□□□□ 0.46
LINC00339-207ENST00000634712 PTGISQ16647 500 aa17.91■□□□□ 0.46
LINC00339-207ENST00000634712 LRIT3Q3SXY7 679 aa17.91■□□□□ 0.46
LINC00339-207ENST00000634712 C8orf34Q49A92 452 aa17.91■□□□□ 0.46
LINC00339-207ENST00000634712 CEP55Q53EZ4 464 aa17.91■□□□□ 0.46
LINC00339-207ENST00000634712 NOC4LQ9BVI4 516 aaKnown RBP17.91■□□□□ 0.46
LINC00339-207ENST00000634712 H3BRB1 525 aa17.9■□□□□ 0.46
LINC00339-207ENST00000634712 ATP9AO75110 1047 aa17.9■□□□□ 0.46
LINC00339-207ENST00000634712 CSF2RAP15509 400 aa17.9■□□□□ 0.46
LINC00339-207ENST00000634712 CCL23P55773 120 aa17.9■□□□□ 0.46
LINC00339-207ENST00000634712 ARHGAP4P98171 946 aa17.9■□□□□ 0.46
LINC00339-207ENST00000634712 UTP14CQ5TAP6 766 aaKnown RBP17.9■□□□□ 0.46
LINC00339-207ENST00000634712 SESTD1Q86VW0 696 aa17.9■□□□□ 0.46
LINC00339-207ENST00000634712 RETREG2Q8NC44 543 aa17.9■□□□□ 0.46
LINC00339-207ENST00000634712 GPR20Q99678 358 aa17.9■□□□□ 0.46
LINC00339-207ENST00000634712 SDF4Q9BRK5 362 aa17.9■□□□□ 0.46
LINC00339-207ENST00000634712 TUT1Q9H6E5 874 aaKnown RBP17.9■□□□□ 0.46
LINC00339-207ENST00000634712 KCNH7Q9NS40 1196 aa17.9■□□□□ 0.46
LINC00339-207ENST00000634712 HDAC6Q9UBN7 1215 aa17.9■□□□□ 0.46
LINC00339-207ENST00000634712 LGALS2P05162 132 aa17.89■□□□□ 0.45
LINC00339-207ENST00000634712 KCNA2P16389 499 aa17.89■□□□□ 0.45
LINC00339-207ENST00000634712 XBP1P17861 261 aa17.89■□□□□ 0.45
LINC00339-207ENST00000634712 BFSP2Q13515 415 aa17.89■□□□□ 0.45
LINC00339-207ENST00000634712 C9orf50Q5SZB4 431 aa17.89■□□□□ 0.45
LINC00339-207ENST00000634712 GDF6Q6KF10 455 aaPredicted RBP17.89■□□□□ 0.45
LINC00339-207ENST00000634712 CCDC155Q8N6L0 562 aa17.89■□□□□ 0.45
LINC00339-207ENST00000634712 CYP2W1Q8TAV3 490 aa17.89■□□□□ 0.45
LINC00339-207ENST00000634712 SEPT1Q8WYJ6 367 aa17.89■□□□□ 0.45
LINC00339-207ENST00000634712 C16orf70Q9BSU1 422 aa17.89■□□□□ 0.45
LINC00339-207ENST00000634712 GTF2IRD1Q9UHL9 959 aa17.89■□□□□ 0.45
LINC00339-207ENST00000634712 ZNF215Q9UL58 517 aaPredicted RBP17.89■□□□□ 0.45
LINC00339-207ENST00000634712 HAS3O00219 553 aa17.88■□□□□ 0.45
LINC00339-207ENST00000634712 RPUSD2Q8IZ73 545 aaKnown RBP17.88■□□□□ 0.45
LINC00339-207ENST00000634712 RNPC3Q96LT9 517 aaKnown RBP17.88■□□□□ 0.45
LINC00339-207ENST00000634712 UMODL1Q5DID0 1318 aa17.87■□□□□ 0.45
LINC00339-207ENST00000634712 MEIS1O00470 390 aa17.87■□□□□ 0.45
LINC00339-207ENST00000634712 SOX1O00570 391 aaPredicted RBP17.87■□□□□ 0.45
LINC00339-207ENST00000634712 CYP3A4P08684 503 aa17.87■□□□□ 0.45
LINC00339-207ENST00000634712 ARP10275 920 aa17.87■□□□□ 0.45
LINC00339-207ENST00000634712 EPHB4P54760 987 aa17.87■□□□□ 0.45
LINC00339-207ENST00000634712 GALNT17Q6IS24 598 aa17.87■□□□□ 0.45
LINC00339-207ENST00000634712 NIPA1Q7RTP0 329 aa17.87■□□□□ 0.45
LINC00339-207ENST00000634712 PLA2G4DQ86XP0 818 aa17.87■□□□□ 0.45
LINC00339-207ENST00000634712 FAM177A1Q8N128 213 aaPredicted RBP17.87■□□□□ 0.45
LINC00339-207ENST00000634712 RASGRP4Q8TDF6 673 aa17.87■□□□□ 0.45
LINC00339-207ENST00000634712 WASF1Q92558 559 aa17.87■□□□□ 0.45
LINC00339-207ENST00000634712 LRCH3Q96II8 777 aa17.87■□□□□ 0.45
LINC00339-207ENST00000634712 C22orf23Q9BZE7 217 aa17.87■□□□□ 0.45
LINC00339-207ENST00000634712 UPF2Q9HAU5 1272 aaKnown RBP17.87■□□□□ 0.45
LINC00339-207ENST00000634712 JPH1Q9HDC5 661 aaPredicted RBP17.87■□□□□ 0.45
LINC00339-207ENST00000634712 IL23AQ9NPF7 189 aa17.87■□□□□ 0.45
LINC00339-207ENST00000634712 SLC9A2Q9UBY0 812 aa17.87■□□□□ 0.45
LINC00339-207ENST00000634712 PCDHA4Q9UN74 947 aa17.87■□□□□ 0.45
LINC00339-207ENST00000634712 ACRP10323 421 aa17.86■□□□□ 0.45
LINC00339-207ENST00000634712 TCF7P36402 384 aaPredicted RBP17.86■□□□□ 0.45
LINC00339-207ENST00000634712 ME3Q16798 604 aa17.86■□□□□ 0.45
LINC00339-207ENST00000634712 PSRC1Q6PGN9 363 aaPredicted RBP17.86■□□□□ 0.45
LINC00339-207ENST00000634712 NECAB1Q8N987 351 aa17.86■□□□□ 0.45
LINC00339-207ENST00000634712 CAGE1Q8TC20 777 aa17.86■□□□□ 0.45
LINC00339-207ENST00000634712 SCLYQ96I15 445 aa17.86■□□□□ 0.45
LINC00339-207ENST00000634712 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.86■□□□□ 0.45
LINC00339-207ENST00000634712 AGO4Q9HCK5 861 aaKnown RBP17.86■□□□□ 0.45
LINC00339-207ENST00000634712 ORC3Q9UBD5 711 aaPredicted RBP17.86■□□□□ 0.45
LINC00339-207ENST00000634712 NFASCO94856 1347 aa17.85■□□□□ 0.45
LINC00339-207ENST00000634712 STK36Q9NRP7 1315 aa17.85■□□□□ 0.45
LINC00339-207ENST00000634712 DOCK5Q9H7D0 1870 aa17.85■□□□□ 0.45
LINC00339-207ENST00000634712 C17orf102A2RUQ5 167 aa17.85■□□□□ 0.45
LINC00339-207ENST00000634712 PITPNM1O00562 1244 aa17.85■□□□□ 0.45
LINC00339-207ENST00000634712 ADAMTS3O15072 1205 aa17.85■□□□□ 0.45
LINC00339-207ENST00000634712 FGBP02675 491 aa17.85■□□□□ 0.45
LINC00339-207ENST00000634712 GNAT1P11488 350 aa17.85■□□□□ 0.45
LINC00339-207ENST00000634712 BLIDQ8IZY5 108 aa17.85■□□□□ 0.45
LINC00339-207ENST00000634712 GLG1Q92896 1179 aa17.85■□□□□ 0.45
LINC00339-207ENST00000634712 AIFM3Q96NN9 605 aa17.85■□□□□ 0.45
LINC00339-207ENST00000634712 WNT8AQ9H1J5 351 aa17.85■□□□□ 0.45
LINC00339-207ENST00000634712 MTIF3Q9H2K0 278 aaKnown RBP17.85■□□□□ 0.45
LINC00339-207ENST00000634712 GSTTP1A0A1W2PQM5 241 aa17.84■□□□□ 0.45
LINC00339-207ENST00000634712 FAM86B1E9PN63 330 aa17.84■□□□□ 0.45
LINC00339-207ENST00000634712 FAM86B2P0C5J1 330 aa17.84■□□□□ 0.45
LINC00339-207ENST00000634712 SMIM10L2AP0DMW4 78 aa17.84■□□□□ 0.45
LINC00339-207ENST00000634712 SMIM10L2BP0DMW5 78 aa17.84■□□□□ 0.45
LINC00339-207ENST00000634712 SETQ01105 290 aaPredicted RBP17.84■□□□□ 0.45
LINC00339-207ENST00000634712 PTK7Q13308 1070 aa17.84■□□□□ 0.45
LINC00339-207ENST00000634712 TMEM240Q5SV17 173 aa17.84■□□□□ 0.45
LINC00339-207ENST00000634712 ZNF365Q70YC5 407 aa17.84■□□□□ 0.45
LINC00339-207ENST00000634712 TRIM50Q86XT4 487 aa17.84■□□□□ 0.45
LINC00339-207ENST00000634712 ATP6V0A1Q93050 837 aa17.84■□□□□ 0.45
LINC00339-207ENST00000634712 GTF3C6Q969F1 213 aa17.84■□□□□ 0.45
LINC00339-207ENST00000634712 ZNF577Q9BSK1 485 aa17.84■□□□□ 0.45
LINC00339-207ENST00000634712 SMARCAD1Q9H4L7 1026 aa17.84■□□□□ 0.45
LINC00339-207ENST00000634712 AZI2Q9H6S1 392 aa17.84■□□□□ 0.45
LINC00339-207ENST00000634712 TCEAL9Q9UHQ7 104 aa17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms