RNA–Protein interactions for RNA: ENST00000626802.2

SOX2-OT-240, SOX2 overlapping transcript, humanhuman

TSL 5

Gene SOX2-OT, Length 737 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-240ENST00000626802 KIF28PB7ZC32 967 aa14□□□□□ -0.17
SOX2-OT-240ENST00000626802 GTPBP6O43824 516 aaPredicted RBP14□□□□□ -0.17
SOX2-OT-240ENST00000626802 LGALS2P05162 132 aa14□□□□□ -0.17
SOX2-OT-240ENST00000626802 POU3F3P20264 500 aaPredicted RBP14□□□□□ -0.17
SOX2-OT-240ENST00000626802 LIN28BQ6ZN17 250 aaKnown RBP eCLIP14□□□□□ -0.17
SOX2-OT-240ENST00000626802 TRIM50Q86XT4 487 aa14□□□□□ -0.17
SOX2-OT-240ENST00000626802 RAB11FIP4Q86YS3 637 aa14□□□□□ -0.17
SOX2-OT-240ENST00000626802 IGDCC4Q8TDY8 1250 aa14□□□□□ -0.17
SOX2-OT-240ENST00000626802 ZBED2Q9BTP6 218 aa14□□□□□ -0.17
SOX2-OT-240ENST00000626802 MLXIPQ9HAP2 919 aa14□□□□□ -0.17
SOX2-OT-240ENST00000626802 LY9Q9HBG7 655 aa14□□□□□ -0.17
SOX2-OT-240ENST00000626802 RTEL1Q9NZ71 1219 aa14□□□□□ -0.17
SOX2-OT-240ENST00000626802 RAPGEFL1Q9UHV5 662 aa14□□□□□ -0.17
SOX2-OT-240ENST00000626802 COL4A6Q14031 1691 aa13.99□□□□□ -0.17
SOX2-OT-240ENST00000626802 PPFIA4O75335 1185 aa13.99□□□□□ -0.17
SOX2-OT-240ENST00000626802 GJB5O95377 273 aa13.99□□□□□ -0.17
SOX2-OT-240ENST00000626802 PLEKHA8P1O95397 391 aa13.99□□□□□ -0.17
SOX2-OT-240ENST00000626802 CTSHP09668 335 aa13.99□□□□□ -0.17
SOX2-OT-240ENST00000626802 SMIM10L2AP0DMW4 78 aa13.99□□□□□ -0.17
SOX2-OT-240ENST00000626802 SMIM10L2BP0DMW5 78 aa13.99□□□□□ -0.17
SOX2-OT-240ENST00000626802 RXRAP19793 462 aa13.99□□□□□ -0.17
SOX2-OT-240ENST00000626802 THPOP40225 353 aa13.99□□□□□ -0.17
SOX2-OT-240ENST00000626802 KCNV1Q6PIU1 500 aa13.99□□□□□ -0.17
SOX2-OT-240ENST00000626802 USP17L6PQ6QN14 398 aa13.99□□□□□ -0.17
SOX2-OT-240ENST00000626802 CATIPQ7Z7H3 387 aa13.99□□□□□ -0.17
SOX2-OT-240ENST00000626802 SERINC5Q86VE9 423 aa13.99□□□□□ -0.17
SOX2-OT-240ENST00000626802 ZNF654Q8IZM8 581 aa13.99□□□□□ -0.17
SOX2-OT-240ENST00000626802 CMTR1Q8N1G2 835 aaKnown RBP13.99□□□□□ -0.17
SOX2-OT-240ENST00000626802 H3BRB1 525 aa13.98□□□□□ -0.17
SOX2-OT-240ENST00000626802 TREHO43280 583 aa13.98□□□□□ -0.17
SOX2-OT-240ENST00000626802 LGR5O75473 907 aa13.98□□□□□ -0.17
SOX2-OT-240ENST00000626802 BMP1P13497 986 aa13.98□□□□□ -0.17
SOX2-OT-240ENST00000626802 SP4Q02446 784 aa13.98□□□□□ -0.17
SOX2-OT-240ENST00000626802 MKRN4PQ13434 485 aaPredicted RBP13.98□□□□□ -0.17
SOX2-OT-240ENST00000626802 SART3Q15020 963 aaKnown RBP13.98□□□□□ -0.17
SOX2-OT-240ENST00000626802 CYFIP1Q7L576 1253 aa13.98□□□□□ -0.17
SOX2-OT-240ENST00000626802 SAMD3Q8N6K7 520 aa13.98□□□□□ -0.17
SOX2-OT-240ENST00000626802 IL27Q8NEV9 243 aa13.98□□□□□ -0.17
SOX2-OT-240ENST00000626802 DBF4BQ8NFT6 615 aa13.98□□□□□ -0.17
SOX2-OT-240ENST00000626802 MAP4K1Q92918 833 aa13.98□□□□□ -0.17
SOX2-OT-240ENST00000626802 ATP6V0A1Q93050 837 aa13.98□□□□□ -0.17
SOX2-OT-240ENST00000626802 INPP4AQ96PE3 977 aaPredicted RBP13.98□□□□□ -0.17
SOX2-OT-240ENST00000626802 TSPYL2Q9H2G4 693 aaPredicted RBP13.98□□□□□ -0.17
SOX2-OT-240ENST00000626802 TUT1Q9H6E5 874 aaKnown RBP13.98□□□□□ -0.17
SOX2-OT-240ENST00000626802 ABHD14A-ACY1A0A1B0GW23 586 aa13.97□□□□□ -0.17
SOX2-OT-240ENST00000626802 hCG_1642624A0A1W2PR95 340 aa13.97□□□□□ -0.17
SOX2-OT-240ENST00000626802 C17orf102A2RUQ5 167 aa13.97□□□□□ -0.17
SOX2-OT-240ENST00000626802 LINC01553A4QN01 128 aa13.97□□□□□ -0.17
SOX2-OT-240ENST00000626802 NOP56O00567 594 aaKnown RBP13.97□□□□□ -0.17
SOX2-OT-240ENST00000626802 PARNO95453 639 aaKnown RBP13.97□□□□□ -0.17
SOX2-OT-240ENST00000626802 TGFB3P10600 412 aa13.97□□□□□ -0.17
SOX2-OT-240ENST00000626802 HOXC8P31273 242 aa13.97□□□□□ -0.17
SOX2-OT-240ENST00000626802 ICAM3P32942 547 aa13.97□□□□□ -0.17
SOX2-OT-240ENST00000626802 IKBKEQ14164 716 aa13.97□□□□□ -0.17
SOX2-OT-240ENST00000626802 GPR20Q99678 358 aa13.97□□□□□ -0.17
SOX2-OT-240ENST00000626802 RNPEPQ9H4A4 650 aa13.97□□□□□ -0.17
SOX2-OT-240ENST00000626802 SUGCTQ9HAC7 445 aa13.97□□□□□ -0.17
SOX2-OT-240ENST00000626802 BDP1A6H8Y1 2624 aa13.97□□□□□ -0.17
SOX2-OT-240ENST00000626802 RSPH10B2B2RC85 870 aa13.96□□□□□ -0.17
SOX2-OT-240ENST00000626802 SPATA31C2B4DYI2 1134 aa13.96□□□□□ -0.17
SOX2-OT-240ENST00000626802 SH2B2O14492 632 aaPredicted RBP13.96□□□□□ -0.17
SOX2-OT-240ENST00000626802 MEIS2O14770 477 aa13.96□□□□□ -0.17
SOX2-OT-240ENST00000626802 PRC1O43663 620 aa13.96□□□□□ -0.17
SOX2-OT-240ENST00000626802 DDAH1O94760 285 aa13.96□□□□□ -0.17
SOX2-OT-240ENST00000626802 RSPH10BP0C881 870 aa13.96□□□□□ -0.17
SOX2-OT-240ENST00000626802 GNPTABQ3T906 1256 aa13.96□□□□□ -0.17
SOX2-OT-240ENST00000626802 UTP14CQ5TAP6 766 aaKnown RBP13.96□□□□□ -0.17
SOX2-OT-240ENST00000626802 METTL7BQ6UX53 244 aa13.96□□□□□ -0.17
SOX2-OT-240ENST00000626802 SKAP1Q86WV1 359 aa13.96□□□□□ -0.17
SOX2-OT-240ENST00000626802 MYOCDQ8IZQ8 938 aa13.96□□□□□ -0.17
SOX2-OT-240ENST00000626802 SRBD1Q8N5C6 995 aaKnown RBP13.96□□□□□ -0.17
SOX2-OT-240ENST00000626802 CTCFLQ8NI51 663 aaPredicted RBP13.96□□□□□ -0.17
SOX2-OT-240ENST00000626802 SMARCC2Q8TAQ2 1214 aa13.96□□□□□ -0.17
SOX2-OT-240ENST00000626802 C17orf80Q9BSJ5 609 aa13.96□□□□□ -0.17
SOX2-OT-240ENST00000626802 SPZ1Q9BXG8 430 aa13.96□□□□□ -0.17
SOX2-OT-240ENST00000626802 LRRC2Q9BYS8 371 aa13.96□□□□□ -0.17
SOX2-OT-240ENST00000626802 LSG1Q9H089 658 aaKnown RBP13.96□□□□□ -0.17
SOX2-OT-240ENST00000626802 SETD4Q9NVD3 440 aa13.96□□□□□ -0.17
SOX2-OT-240ENST00000626802 FIBPO43427 364 aa13.95□□□□□ -0.18
SOX2-OT-240ENST00000626802 COL9A1P20849 921 aa13.95□□□□□ -0.18
SOX2-OT-240ENST00000626802 ERVK-21P61565 698 aa13.95□□□□□ -0.18
SOX2-OT-240ENST00000626802 TRAF1Q13077 416 aa13.95□□□□□ -0.18
SOX2-OT-240ENST00000626802 UBE2SQ16763 222 aa13.95□□□□□ -0.18
SOX2-OT-240ENST00000626802 PLEKHG4Q58EX7 1191 aa13.95□□□□□ -0.18
SOX2-OT-240ENST00000626802 RRP36Q96EU6 259 aaKnown RBP13.95□□□□□ -0.18
SOX2-OT-240ENST00000626802 TGS1Q96RS0 853 aaKnown RBP13.95□□□□□ -0.18
SOX2-OT-240ENST00000626802 RAD9AQ99638 391 aa13.95□□□□□ -0.18
SOX2-OT-240ENST00000626802 EMSYQ7Z589 1322 aa13.94□□□□□ -0.18
SOX2-OT-240ENST00000626802 SLC27A2O14975 620 aa13.94□□□□□ -0.18
SOX2-OT-240ENST00000626802 EFCAB14O75071 495 aa13.94□□□□□ -0.18
SOX2-OT-240ENST00000626802 CENPBP07199 599 aaPredicted RBP13.94□□□□□ -0.18
SOX2-OT-240ENST00000626802 NEDD9Q14511 834 aa13.94□□□□□ -0.18
SOX2-OT-240ENST00000626802 PCNX4Q63HM2 1172 aa13.94□□□□□ -0.18
SOX2-OT-240ENST00000626802 CASC1Q6TDU7 716 aa13.94□□□□□ -0.18
SOX2-OT-240ENST00000626802 NFXL1Q6ZNB6 911 aa13.94□□□□□ -0.18
SOX2-OT-240ENST00000626802 LMBR1Q8WVP7 490 aa13.94□□□□□ -0.18
SOX2-OT-240ENST00000626802 PKD2L1Q9P0L9 805 aa13.94□□□□□ -0.18
SOX2-OT-240ENST00000626802 SEC63Q9UGP8 760 aaKnown RBP13.94□□□□□ -0.18
SOX2-OT-240ENST00000626802 C5orf42Q9H799 3197 aa13.94□□□□□ -0.18
SOX2-OT-240ENST00000626802 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms