RNA–Protein interactions for RNA: ENST00000625617.2

TUBB3-215, Transcript of tubulin beta 3 class III, humanhuman

TSL 4 BASIC

Gene TUBB3, Length 570 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-215ENST00000625617 FIBPO43427 364 aa16.72■□□□□ 0.27
TUBB3-215ENST00000625617 CAND2O75155 1236 aa16.72■□□□□ 0.27
TUBB3-215ENST00000625617 CHMLP26374 656 aa16.72■□□□□ 0.27
TUBB3-215ENST00000625617 ICAM3P32942 547 aa16.72■□□□□ 0.27
TUBB3-215ENST00000625617 NEDD9Q14511 834 aa16.72■□□□□ 0.27
TUBB3-215ENST00000625617 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.72■□□□□ 0.27
TUBB3-215ENST00000625617 USP26Q9BXU7 913 aa16.72■□□□□ 0.27
TUBB3-215ENST00000625617 RAPGEFL1Q9UHV5 662 aa16.72■□□□□ 0.27
TUBB3-215ENST00000625617 ZNF215Q9UL58 517 aaPredicted RBP16.72■□□□□ 0.27
TUBB3-215ENST00000625617 INSL6Q9Y581 213 aa16.72■□□□□ 0.27
TUBB3-215ENST00000625617 TAF6LQ9Y6J9 622 aa16.72■□□□□ 0.27
TUBB3-215ENST00000625617 XIRP2A4UGR9 3374 aa16.71■□□□□ 0.27
TUBB3-215ENST00000625617 PTPRSQ13332 1948 aa16.71■□□□□ 0.27
TUBB3-215ENST00000625617 RBAK-RBAKDNI3L0D1 243 aa16.71■□□□□ 0.27
TUBB3-215ENST00000625617 CTSHP09668 335 aa16.71■□□□□ 0.27
TUBB3-215ENST00000625617 MRPS9P82933 396 aaKnown RBP16.71■□□□□ 0.27
TUBB3-215ENST00000625617 MKRN4PQ13434 485 aaPredicted RBP16.71■□□□□ 0.27
TUBB3-215ENST00000625617 PLEKHG4Q58EX7 1191 aa16.71■□□□□ 0.27
TUBB3-215ENST00000625617 CYFIP1Q7L576 1253 aa16.71■□□□□ 0.27
TUBB3-215ENST00000625617 TRIM50Q86XT4 487 aa16.71■□□□□ 0.27
TUBB3-215ENST00000625617 FBXO22Q8NEZ5 403 aa16.71■□□□□ 0.27
TUBB3-215ENST00000625617 CUL5Q93034 780 aa16.71■□□□□ 0.27
TUBB3-215ENST00000625617 NCOR1O75376 2440 aa16.71■□□□□ 0.27
TUBB3-215ENST00000625617 MYH6P13533 1939 aa16.7■□□□□ 0.26
TUBB3-215ENST00000625617 SPATA31C2B4DYI2 1134 aa16.7■□□□□ 0.26
TUBB3-215ENST00000625617 SGSM2O43147 1006 aa16.7■□□□□ 0.26
TUBB3-215ENST00000625617 TREHO43280 583 aa16.7■□□□□ 0.26
TUBB3-215ENST00000625617 DDAH1O94760 285 aa16.7■□□□□ 0.26
TUBB3-215ENST00000625617 GNAT1P11488 350 aa16.7■□□□□ 0.26
TUBB3-215ENST00000625617 ANTXR2P58335 489 aa16.7■□□□□ 0.26
TUBB3-215ENST00000625617 SEMA3FQ13275 785 aa16.7■□□□□ 0.26
TUBB3-215ENST00000625617 CTCFLQ8NI51 663 aaPredicted RBP16.7■□□□□ 0.26
TUBB3-215ENST00000625617 SMARCC2Q8TAQ2 1214 aa16.7■□□□□ 0.26
TUBB3-215ENST00000625617 SEPT8Q92599 483 aa16.7■□□□□ 0.26
TUBB3-215ENST00000625617 RRP36Q96EU6 259 aaKnown RBP16.7■□□□□ 0.26
TUBB3-215ENST00000625617 GPR20Q99678 358 aa16.7■□□□□ 0.26
TUBB3-215ENST00000625617 C17orf80Q9BSJ5 609 aa16.7■□□□□ 0.26
TUBB3-215ENST00000625617 SPZ1Q9BXG8 430 aa16.7■□□□□ 0.26
TUBB3-215ENST00000625617 RNPEPQ9H4A4 650 aa16.7■□□□□ 0.26
TUBB3-215ENST00000625617 BCAS3Q9H6U6 928 aa16.7■□□□□ 0.26
TUBB3-215ENST00000625617 SEC63Q9UGP8 760 aaKnown RBP16.7■□□□□ 0.26
TUBB3-215ENST00000625617 TRANK1O15050 2925 aa16.69■□□□□ 0.26
TUBB3-215ENST00000625617 KIF5BP33176 963 aa16.69■□□□□ 0.26
TUBB3-215ENST00000625617 HTRA4P83105 476 aaPredicted RBP16.69■□□□□ 0.26
TUBB3-215ENST00000625617 SP4Q02446 784 aa16.69■□□□□ 0.26
TUBB3-215ENST00000625617 MB21D2Q8IYB1 491 aaPredicted RBP16.69■□□□□ 0.26
TUBB3-215ENST00000625617 ZNF654Q8IZM8 581 aa16.69■□□□□ 0.26
TUBB3-215ENST00000625617 SP7Q8TDD2 431 aaPredicted RBP16.69■□□□□ 0.26
TUBB3-215ENST00000625617 YME1L1Q96TA2 773 aa16.69■□□□□ 0.26
TUBB3-215ENST00000625617 MYL10Q9BUA6 226 aa16.69■□□□□ 0.26
TUBB3-215ENST00000625617 UBE2ZQ9H832 354 aaPredicted RBP16.69■□□□□ 0.26
TUBB3-215ENST00000625617 RTEL1Q9NZ71 1219 aa16.69■□□□□ 0.26
TUBB3-215ENST00000625617 TRIP12Q14669 1992 aaPredicted RBP16.69■□□□□ 0.26
TUBB3-215ENST00000625617 UTP14CQ5TAP6 766 aaKnown RBP16.68■□□□□ 0.26
TUBB3-215ENST00000625617 PCNX4Q63HM2 1172 aa16.68■□□□□ 0.26
TUBB3-215ENST00000625617 XRRA1Q6P2D8 792 aa16.68■□□□□ 0.26
TUBB3-215ENST00000625617 USP17L6PQ6QN14 398 aa16.68■□□□□ 0.26
TUBB3-215ENST00000625617 CASC1Q6TDU7 716 aa16.68■□□□□ 0.26
TUBB3-215ENST00000625617 IGDCC4Q8TDY8 1250 aa16.68■□□□□ 0.26
TUBB3-215ENST00000625617 LMBR1Q8WVP7 490 aa16.68■□□□□ 0.26
TUBB3-215ENST00000625617 SAMD11Q96NU1 681 aa16.68■□□□□ 0.26
TUBB3-215ENST00000625617 MAP3K14Q99558 947 aa16.68■□□□□ 0.26
TUBB3-215ENST00000625617 LY9Q9HBG7 655 aa16.68■□□□□ 0.26
TUBB3-215ENST00000625617 SETD4Q9NVD3 440 aa16.68■□□□□ 0.26
TUBB3-215ENST00000625617 RBM8AQ9Y5S9 174 aaKnown RBP16.68■□□□□ 0.26
TUBB3-215ENST00000625617 REV3LO60673 3130 aa16.67■□□□□ 0.26
TUBB3-215ENST00000625617 PIK3CDO00329 1044 aa16.67■□□□□ 0.26
TUBB3-215ENST00000625617 ARHGAP4P98171 946 aa16.67■□□□□ 0.26
TUBB3-215ENST00000625617 PTPROQ16827 1216 aa16.67■□□□□ 0.26
TUBB3-215ENST00000625617 NLRX1Q86UT6 975 aa16.67■□□□□ 0.26
TUBB3-215ENST00000625617 APBB2Q92870 758 aa16.67■□□□□ 0.26
TUBB3-215ENST00000625617 SENP7Q9BQF6 1050 aa16.67■□□□□ 0.26
TUBB3-215ENST00000625617 LZTS2Q9BRK4 669 aa16.67■□□□□ 0.26
TUBB3-215ENST00000625617 BDP1A6H8Y1 2624 aa16.66■□□□□ 0.26
TUBB3-215ENST00000625617 KCNA5P22460 613 aa16.66■□□□□ 0.26
TUBB3-215ENST00000625617 GNAQP50148 359 aa16.66■□□□□ 0.26
TUBB3-215ENST00000625617 EPC2Q52LR7 807 aa16.66■□□□□ 0.26
TUBB3-215ENST00000625617 TIGD5Q53EQ6 642 aa16.66■□□□□ 0.26
TUBB3-215ENST00000625617 NFXL1Q6ZNB6 911 aa16.66■□□□□ 0.26
TUBB3-215ENST00000625617 GIMAP8Q8ND71 665 aaPredicted RBP16.66■□□□□ 0.26
TUBB3-215ENST00000625617 MAP4K1Q92918 833 aa16.66■□□□□ 0.26
TUBB3-215ENST00000625617 MRPL38Q96DV4 380 aaKnown RBP16.66■□□□□ 0.26
TUBB3-215ENST00000625617 IFIH1Q9BYX4 1025 aaKnown RBP16.66■□□□□ 0.26
TUBB3-215ENST00000625617 NRCAMQ92823 1304 aa16.66■□□□□ 0.26
TUBB3-215ENST00000625617 TCF20Q9UGU0 1960 aaKnown RBP16.66■□□□□ 0.26
TUBB3-215ENST00000625617 COL4A6Q14031 1691 aa16.65■□□□□ 0.26
TUBB3-215ENST00000625617 MEIS2O14770 477 aa16.65■□□□□ 0.26
TUBB3-215ENST00000625617 PRC1O43663 620 aa16.65■□□□□ 0.26
TUBB3-215ENST00000625617 UPP2O95045 317 aa16.65■□□□□ 0.26
TUBB3-215ENST00000625617 PLEKHA8P1O95397 391 aa16.65■□□□□ 0.26
TUBB3-215ENST00000625617 SMARCA1P28370 1054 aa16.65■□□□□ 0.26
TUBB3-215ENST00000625617 PLA2G5P39877 138 aa16.65■□□□□ 0.26
TUBB3-215ENST00000625617 TOP1MTQ969P6 601 aa16.65■□□□□ 0.26
TUBB3-215ENST00000625617 GPRASP2Q96D09 838 aa16.65■□□□□ 0.26
TUBB3-215ENST00000625617 CDHR1Q96JP9 859 aa16.65■□□□□ 0.26
TUBB3-215ENST00000625617 MTA3Q9BTC8 594 aa16.65■□□□□ 0.26
TUBB3-215ENST00000625617 OSBPL7Q9BZF2 842 aa16.65■□□□□ 0.26
TUBB3-215ENST00000625617 EPHX3Q9H6B9 360 aa16.65■□□□□ 0.26
TUBB3-215ENST00000625617 TELO2Q9Y4R8 837 aa16.65■□□□□ 0.26
TUBB3-215ENST00000625617 SIP14410 1827 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms