RNA–Protein interactions for RNA: ENST00000625275.2

R3HCC1-210, Transcript of R3H domain and coiled-coil containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene R3HCC1, Length 1,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1-210ENST00000625275 VSIG10LQ86VR7 867 aa22.85■■□□□ 1.25
R3HCC1-210ENST00000625275 KAT2BQ92831 832 aa22.85■■□□□ 1.25
R3HCC1-210ENST00000625275 LLPHQ9BRT6 129 aaKnown RBP22.85■■□□□ 1.25
R3HCC1-210ENST00000625275 NOD1Q9Y239 953 aa22.85■■□□□ 1.25
R3HCC1-210ENST00000625275 A0A0C4DFX4 3053 aa22.85■■□□□ 1.25
R3HCC1-210ENST00000625275 STK36Q9NRP7 1315 aa22.85■■□□□ 1.25
R3HCC1-210ENST00000625275 UNC80Q8N2C7 3258 aa22.85■■□□□ 1.25
R3HCC1-210ENST00000625275 DLL1O00548 723 aa22.85■■□□□ 1.25
R3HCC1-210ENST00000625275 CCND2P30279 289 aa22.85■■□□□ 1.25
R3HCC1-210ENST00000625275 LAMC2Q13753 1193 aa22.85■■□□□ 1.25
R3HCC1-210ENST00000625275 GRIN2CQ14957 1233 aa22.85■■□□□ 1.25
R3HCC1-210ENST00000625275 RAB30Q15771 203 aa22.85■■□□□ 1.25
R3HCC1-210ENST00000625275 PKN1Q16512 942 aa22.85■■□□□ 1.25
R3HCC1-210ENST00000625275 KCNV1Q6PIU1 500 aa22.85■■□□□ 1.25
R3HCC1-210ENST00000625275 SESTD1Q86VW0 696 aa22.85■■□□□ 1.25
R3HCC1-210ENST00000625275 FCHSD1Q86WN1 690 aa22.85■■□□□ 1.25
R3HCC1-210ENST00000625275 PPTC7Q8NI37 304 aa22.85■■□□□ 1.25
R3HCC1-210ENST00000625275 AKAP17AQ02040 695 aaKnown RBP22.84■■□□□ 1.25
R3HCC1-210ENST00000625275 PHF6Q8IWS0 365 aaKnown RBP eCLIP22.84■■□□□ 1.25
R3HCC1-210ENST00000625275 DHX37Q8IY37 1157 aaKnown RBP22.84■■□□□ 1.25
R3HCC1-210ENST00000625275 SMARCC2Q8TAQ2 1214 aa22.84■■□□□ 1.25
R3HCC1-210ENST00000625275 FRMPD4Q14CM0 1322 aa22.83■■□□□ 1.25
R3HCC1-210ENST00000625275 CHD9Q3L8U1 2897 aa22.83■■□□□ 1.25
R3HCC1-210ENST00000625275 EYSQ5T1H1 3165 aa22.83■■□□□ 1.25
R3HCC1-210ENST00000625275 FDPSP14324 419 aaKnown RBP22.83■■□□□ 1.25
R3HCC1-210ENST00000625275 RFC2P35250 354 aa22.83■■□□□ 1.25
R3HCC1-210ENST00000625275 BFSP2Q13515 415 aa22.83■■□□□ 1.25
R3HCC1-210ENST00000625275 PTGISQ16647 500 aa22.83■■□□□ 1.25
R3HCC1-210ENST00000625275 PFKFB3Q16875 520 aaPredicted RBP22.83■■□□□ 1.25
R3HCC1-210ENST00000625275 DEFB128Q7Z7B8 93 aa22.83■■□□□ 1.25
R3HCC1-210ENST00000625275 RETREG2Q8NC44 543 aa22.83■■□□□ 1.25
R3HCC1-210ENST00000625275 KATNAL1Q9BW62 490 aa22.83■■□□□ 1.25
R3HCC1-210ENST00000625275 ORC3Q9UBD5 711 aaPredicted RBP22.83■■□□□ 1.25
R3HCC1-210ENST00000625275 MSRAQ9UJ68 235 aa22.83■■□□□ 1.25
R3HCC1-210ENST00000625275 SLC4A7Q9Y6M7 1214 aa22.83■■□□□ 1.25
R3HCC1-210ENST00000625275 DEXIO95424 95 aa22.82■■□□□ 1.24
R3HCC1-210ENST00000625275 F2P00734 622 aa22.82■■□□□ 1.24
R3HCC1-210ENST00000625275 ZNF286BP0CG31 522 aa22.82■■□□□ 1.24
R3HCC1-210ENST00000625275 SCG2P13521 617 aa22.82■■□□□ 1.24
R3HCC1-210ENST00000625275 GDF6Q6KF10 455 aaPredicted RBP22.82■■□□□ 1.24
R3HCC1-210ENST00000625275 CCDC155Q8N6L0 562 aa22.82■■□□□ 1.24
R3HCC1-210ENST00000625275 GPKOWQ92917 476 aaPredicted RBP eCLIP22.82■■□□□ 1.24
R3HCC1-210ENST00000625275 RBM19Q9Y4C8 960 aaKnown RBP22.82■■□□□ 1.24
R3HCC1-210ENST00000625275 ZBBXA8MT70 800 aa22.81■■□□□ 1.24
R3HCC1-210ENST00000625275 GGPS1O95749 300 aa22.81■■□□□ 1.24
R3HCC1-210ENST00000625275 IQCF3P0C7M6 154 aa22.81■■□□□ 1.24
R3HCC1-210ENST00000625275 TGFB3P10600 412 aa22.81■■□□□ 1.24
R3HCC1-210ENST00000625275 HOXD8P13378 290 aaPredicted RBP22.81■■□□□ 1.24
R3HCC1-210ENST00000625275 UBA1P22314 1058 aaKnown RBP22.81■■□□□ 1.24
R3HCC1-210ENST00000625275 PSEN2P49810 448 aa22.81■■□□□ 1.24
R3HCC1-210ENST00000625275 CELF3Q5SZQ8 465 aaKnown RBP22.81■■□□□ 1.24
R3HCC1-210ENST00000625275 MYSM1Q5VVJ2 828 aa22.81■■□□□ 1.24
R3HCC1-210ENST00000625275 WWC2Q6AWC2 1192 aa22.81■■□□□ 1.24
R3HCC1-210ENST00000625275 HEATR3Q7Z4Q2 680 aa22.81■■□□□ 1.24
R3HCC1-210ENST00000625275 CAGE1Q8TC20 777 aa22.81■■□□□ 1.24
R3HCC1-210ENST00000625275 CTAGE1Q96RT6 745 aa22.81■■□□□ 1.24
R3HCC1-210ENST00000625275 ANP32AP39687 249 aaKnown RBP22.8■■□□□ 1.24
R3HCC1-210ENST00000625275 BECN1Q14457 450 aa22.8■■□□□ 1.24
R3HCC1-210ENST00000625275 MFSD10Q14728 455 aa22.8■■□□□ 1.24
R3HCC1-210ENST00000625275 ZFP91Q96JP5 570 aaPredicted RBP22.8■■□□□ 1.24
R3HCC1-210ENST00000625275 SPATA33Q96N06 139 aa22.8■■□□□ 1.24
R3HCC1-210ENST00000625275 AIFM3Q96NN9 605 aa22.8■■□□□ 1.24
R3HCC1-210ENST00000625275 GTF2IRD1Q9UHL9 959 aa22.8■■□□□ 1.24
R3HCC1-210ENST00000625275 ZSCAN21Q9Y5A6 473 aaPredicted RBP22.8■■□□□ 1.24
R3HCC1-210ENST00000625275 MICAL3Q7RTP6 2002 aa22.8■■□□□ 1.24
R3HCC1-210ENST00000625275 PRUNE2Q8WUY3 3088 aa22.8■■□□□ 1.24
R3HCC1-210ENST00000625275 ACTN1P12814 892 aa22.79■■□□□ 1.24
R3HCC1-210ENST00000625275 HMGN5P82970 282 aaKnown RBP22.79■■□□□ 1.24
R3HCC1-210ENST00000625275 TYW1BQ6NUM6 668 aa22.79■■□□□ 1.24
R3HCC1-210ENST00000625275 C7orf31Q8N865 590 aa22.79■■□□□ 1.24
R3HCC1-210ENST00000625275 INTS4Q96HW7 963 aaKnown RBP22.79■■□□□ 1.24
R3HCC1-210ENST00000625275 ALG1Q9BT22 464 aa22.79■■□□□ 1.24
R3HCC1-210ENST00000625275 NKX2-4Q9H2Z4 354 aa22.79■■□□□ 1.24
R3HCC1-210ENST00000625275 BARHL2Q9NY43 387 aa22.79■■□□□ 1.24
R3HCC1-210ENST00000625275 HDAC6Q9UBN7 1215 aa22.79■■□□□ 1.24
R3HCC1-210ENST00000625275 YBX2Q9Y2T7 364 aaKnown RBP22.79■■□□□ 1.24
R3HCC1-210ENST00000625275 STXBP3O00186 592 aa22.79■■□□□ 1.24
R3HCC1-210ENST00000625275 HAS3O00219 553 aa22.79■■□□□ 1.24
R3HCC1-210ENST00000625275 SORBS3O60504 671 aa22.79■■□□□ 1.24
R3HCC1-210ENST00000625275 PPFIA4O75335 1185 aa22.79■■□□□ 1.24
R3HCC1-210ENST00000625275 STAM2O75886 525 aa22.79■■□□□ 1.24
R3HCC1-210ENST00000625275 SP2Q02086 613 aa22.79■■□□□ 1.24
R3HCC1-210ENST00000625275 KIAA0753Q2KHM9 967 aa22.79■■□□□ 1.24
R3HCC1-210ENST00000625275 HSDL1Q3SXM5 330 aa22.79■■□□□ 1.24
R3HCC1-210ENST00000625275 GNPTABQ3T906 1256 aa22.79■■□□□ 1.24
R3HCC1-210ENST00000625275 AFAP1L1Q8TED9 768 aa22.79■■□□□ 1.24
R3HCC1-210ENST00000625275 FOXD4L1Q9NU39 408 aa22.79■■□□□ 1.24
R3HCC1-210ENST00000625275 hCG_1984214I3L0E3 225 aa22.78■■□□□ 1.24
R3HCC1-210ENST00000625275 ATP2A2P16615 1042 aaKnown RBP22.78■■□□□ 1.24
R3HCC1-210ENST00000625275 MRPS9P82933 396 aaKnown RBP22.78■■□□□ 1.24
R3HCC1-210ENST00000625275 ZNF713Q8N859 430 aaPredicted RBP22.78■■□□□ 1.24
R3HCC1-210ENST00000625275 DHX38Q92620 1227 aaKnown RBP22.78■■□□□ 1.24
R3HCC1-210ENST00000625275 CUL5Q93034 780 aa22.78■■□□□ 1.24
R3HCC1-210ENST00000625275 INPP4AQ96PE3 977 aaPredicted RBP22.78■■□□□ 1.24
R3HCC1-210ENST00000625275 GAS2L1Q99501 681 aaPredicted RBP22.78■■□□□ 1.24
R3HCC1-210ENST00000625275 SLC28A3Q9HAS3 691 aa22.78■■□□□ 1.24
R3HCC1-210ENST00000625275 SMC3Q9UQE7 1217 aa22.78■■□□□ 1.24
R3HCC1-210ENST00000625275 PIK3CDO00329 1044 aa22.77■■□□□ 1.24
R3HCC1-210ENST00000625275 GJB2P29033 226 aa22.77■■□□□ 1.24
R3HCC1-210ENST00000625275 RABGGTBP53611 331 aa22.77■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms