RNA–Protein interactions for RNA: ENST00000625151.1

LINC00552-201, long intergenic non-protein coding RNA 552, humanhuman

BASIC

Gene LINC00552, Length 2,579 nt, Biotype TEC.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00552-201ENST00000625151 ANKRD65E5RJM6 399 aa16.8■□□□□ 0.28
LINC00552-201ENST00000625151 TRAF5O00463 557 aa16.8■□□□□ 0.28
LINC00552-201ENST00000625151 SERPINB2P05120 415 aa16.8■□□□□ 0.28
LINC00552-201ENST00000625151 IL1R1P14778 569 aa16.8■□□□□ 0.28
LINC00552-201ENST00000625151 FKBP3Q00688 224 aaKnown RBP16.8■□□□□ 0.28
LINC00552-201ENST00000625151 ASPRV1Q53RT3 343 aa16.8■□□□□ 0.28
LINC00552-201ENST00000625151 CNBD1Q8NA66 436 aa16.8■□□□□ 0.28
LINC00552-201ENST00000625151 EDEM3Q9BZQ6 932 aa16.8■□□□□ 0.28
LINC00552-201ENST00000625151 TBC1D7Q9P0N9 293 aa16.8■□□□□ 0.28
LINC00552-201ENST00000625151 CEP72Q9P209 647 aa16.8■□□□□ 0.28
LINC00552-201ENST00000625151 PLIN4Q96Q06 1357 aa16.8■□□□□ 0.28
LINC00552-201ENST00000625151 ATAD5Q96QE3 1844 aa16.79■□□□□ 0.28
LINC00552-201ENST00000625151 RBAK-RBAKDNI3L0D1 243 aa16.79■□□□□ 0.28
LINC00552-201ENST00000625151 SNHG28P0DPA3 235 aa16.79■□□□□ 0.28
LINC00552-201ENST00000625151 AKR1B1P15121 316 aa16.79■□□□□ 0.28
LINC00552-201ENST00000625151 PAFAH1B1P43034 410 aa16.79■□□□□ 0.28
LINC00552-201ENST00000625151 EPHB4P54760 987 aa16.79■□□□□ 0.28
LINC00552-201ENST00000625151 NAP1L1P55209 391 aaKnown RBP16.79■□□□□ 0.28
LINC00552-201ENST00000625151 CCDC40Q4G0X9 1142 aa16.79■□□□□ 0.28
LINC00552-201ENST00000625151 FAM83BQ5T0W9 1011 aa16.79■□□□□ 0.28
LINC00552-201ENST00000625151 DEFB132Q7Z7B7 95 aa16.79■□□□□ 0.28
LINC00552-201ENST00000625151 PLCD3Q8N3E9 789 aa16.79■□□□□ 0.28
LINC00552-201ENST00000625151 LRRC27Q9C0I9 530 aa16.79■□□□□ 0.28
LINC00552-201ENST00000625151 KANSL2Q9H9L4 492 aa16.79■□□□□ 0.28
LINC00552-201ENST00000625151 JMJD4Q9H9V9 463 aa16.79■□□□□ 0.28
LINC00552-201ENST00000625151 PANK4Q9NVE7 773 aa16.79■□□□□ 0.28
LINC00552-201ENST00000625151 DDX25Q9UHL0 483 aaKnown RBP16.79■□□□□ 0.28
LINC00552-201ENST00000625151 GAKO14976 1311 aa16.79■□□□□ 0.28
LINC00552-201ENST00000625151 POLRMTO00411 1230 aaKnown RBP16.79■□□□□ 0.28
LINC00552-201ENST00000625151 PPP4R3AQ6IN85 833 aa16.79■□□□□ 0.28
LINC00552-201ENST00000625151 C8orf74Q6P047 294 aa16.79■□□□□ 0.28
LINC00552-201ENST00000625151 FOXR2Q6PJQ5 311 aa16.79■□□□□ 0.28
LINC00552-201ENST00000625151 FAM163AQ96GL9 167 aaPredicted RBP16.79■□□□□ 0.28
LINC00552-201ENST00000625151 UIMC1Q96RL1 719 aa16.79■□□□□ 0.28
LINC00552-201ENST00000625151 SH3GL2Q99962 352 aa16.79■□□□□ 0.28
LINC00552-201ENST00000625151 MYH4Q9Y623 1939 aa16.78■□□□□ 0.28
LINC00552-201ENST00000625151 CLK2P49760 499 aaKnown RBP16.78■□□□□ 0.28
LINC00552-201ENST00000625151 PICALMQ13492 652 aa16.78■□□□□ 0.28
LINC00552-201ENST00000625151 SKIDA1Q1XH10 827 aa16.78■□□□□ 0.28
LINC00552-201ENST00000625151 SLC9C1Q4G0N8 1177 aa16.78■□□□□ 0.28
LINC00552-201ENST00000625151 FAM26FQ5R3K3 315 aa16.78■□□□□ 0.28
LINC00552-201ENST00000625151 SFMBT2Q5VUG0 894 aa16.78■□□□□ 0.28
LINC00552-201ENST00000625151 MSL1Q68DK7 614 aa16.78■□□□□ 0.28
LINC00552-201ENST00000625151 ADGRF4Q8IZF3 695 aa16.78■□□□□ 0.28
LINC00552-201ENST00000625151 RNF10Q8N5U6 811 aaKnown RBP16.78■□□□□ 0.28
LINC00552-201ENST00000625151 LSM14BQ9BX40 385 aaKnown RBP16.78■□□□□ 0.28
LINC00552-201ENST00000625151 SSBP05455 408 aaKnown RBP eCLIP16.78■□□□□ 0.28
LINC00552-201ENST00000625151 POLR2FP61218 127 aaKnown RBP16.78■□□□□ 0.28
LINC00552-201ENST00000625151 TTBK2Q6IQ55 1244 aa16.78■□□□□ 0.28
LINC00552-201ENST00000625151 DPP8Q6V1X1 898 aaPredicted RBP16.78■□□□□ 0.28
LINC00552-201ENST00000625151 NELFCDQ8IXH7 590 aa16.78■□□□□ 0.28
LINC00552-201ENST00000625151 PNMA6FA0A0J9YX94 578 aa16.77■□□□□ 0.28
LINC00552-201ENST00000625151 E9PMD0 336 aa16.77■□□□□ 0.28
LINC00552-201ENST00000625151 SERPING1P05155 500 aa16.77■□□□□ 0.28
LINC00552-201ENST00000625151 DNA2P51530 1060 aa16.77■□□□□ 0.28
LINC00552-201ENST00000625151 CACNB1Q02641 598 aaPredicted RBP16.77■□□□□ 0.28
LINC00552-201ENST00000625151 EMBQ6PCB8 327 aa16.77■□□□□ 0.28
LINC00552-201ENST00000625151 EHD4Q9H223 541 aa16.77■□□□□ 0.28
LINC00552-201ENST00000625151 GGA1Q9UJY5 639 aa16.77■□□□□ 0.28
LINC00552-201ENST00000625151 IGKV6D-41A0A0C4DH26 115 aa16.77■□□□□ 0.27
LINC00552-201ENST00000625151 NPHP3-ACAD11A0A0J9YXS1 232 aa16.77■□□□□ 0.27
LINC00552-201ENST00000625151 PALMO75781 387 aa16.77■□□□□ 0.27
LINC00552-201ENST00000625151 TNFRSF8P28908 595 aa16.77■□□□□ 0.27
LINC00552-201ENST00000625151 IRAK1P51617 712 aa16.77■□□□□ 0.27
LINC00552-201ENST00000625151 GABPAQ06546 454 aa16.77■□□□□ 0.27
LINC00552-201ENST00000625151 RPGRQ92834 1020 aaKnown RBP16.77■□□□□ 0.27
LINC00552-201ENST00000625151 CAVIN3Q969G5 261 aa16.77■□□□□ 0.27
LINC00552-201ENST00000625151 DAGLAQ9Y4D2 1042 aa16.77■□□□□ 0.27
LINC00552-201ENST00000625151 PCDHA2Q9Y5H9 948 aa16.77■□□□□ 0.27
LINC00552-201ENST00000625151 ZSCAN5CA6NGD5 496 aaPredicted RBP16.76■□□□□ 0.27
LINC00552-201ENST00000625151 FTCDO95954 541 aa16.76■□□□□ 0.27
LINC00552-201ENST00000625151 KLRC1P26715 233 aa16.76■□□□□ 0.27
LINC00552-201ENST00000625151 HOXA7P31268 230 aaPredicted RBP16.76■□□□□ 0.27
LINC00552-201ENST00000625151 ZNF543Q08ER8 600 aa16.76■□□□□ 0.27
LINC00552-201ENST00000625151 CFAP221Q4G0U5 840 aa16.76■□□□□ 0.27
LINC00552-201ENST00000625151 ARHGAP27Q6ZUM4 889 aa16.76■□□□□ 0.27
LINC00552-201ENST00000625151 TBC1D5Q92609 795 aa16.76■□□□□ 0.27
LINC00552-201ENST00000625151 SYN2Q92777 582 aaPredicted RBP16.76■□□□□ 0.27
LINC00552-201ENST00000625151 ARL8AQ96BM9 186 aa16.76■□□□□ 0.27
LINC00552-201ENST00000625151 PDGFDQ9GZP0 370 aaPredicted RBP16.76■□□□□ 0.27
LINC00552-201ENST00000625151 ATP6V0A2Q9Y487 856 aa16.76■□□□□ 0.27
LINC00552-201ENST00000625151 GOLGA8KD6RF30 607 aa16.76■□□□□ 0.27
LINC00552-201ENST00000625151 MARCH6O60337 910 aa16.76■□□□□ 0.27
LINC00552-201ENST00000625151 GLI1P08151 1106 aa16.76■□□□□ 0.27
LINC00552-201ENST00000625151 ATP2B4P23634 1241 aa16.76■□□□□ 0.27
LINC00552-201ENST00000625151 SLC16A2P36021 539 aa16.76■□□□□ 0.27
LINC00552-201ENST00000625151 CORO7P57737 925 aa16.76■□□□□ 0.27
LINC00552-201ENST00000625151 PPFIA1Q13136 1202 aa16.76■□□□□ 0.27
LINC00552-201ENST00000625151 TTMPQ5BVD1 217 aa16.76■□□□□ 0.27
LINC00552-201ENST00000625151 PPP1R18Q6NYC8 613 aa16.76■□□□□ 0.27
LINC00552-201ENST00000625151 TRIM59Q8IWR1 403 aa16.76■□□□□ 0.27
LINC00552-201ENST00000625151 TSKSQ9UJT2 592 aa16.76■□□□□ 0.27
LINC00552-201ENST00000625151 PCDHA12Q9UN75 941 aa16.76■□□□□ 0.27
LINC00552-201ENST00000625151 ARID5AQ03989 594 aa16.75■□□□□ 0.27
LINC00552-201ENST00000625151 SEPT2Q15019 361 aa16.75■□□□□ 0.27
LINC00552-201ENST00000625151 NAB2Q15742 525 aa16.75■□□□□ 0.27
LINC00552-201ENST00000625151 SLF2Q8IX21 1173 aa16.75■□□□□ 0.27
LINC00552-201ENST00000625151 CUL5Q93034 780 aa16.75■□□□□ 0.27
LINC00552-201ENST00000625151 CEP63Q96MT8 703 aa16.75■□□□□ 0.27
LINC00552-201ENST00000625151 PACSIN1Q9BY11 444 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms