RNA–Protein interactions for RNA: ENST00000621897.1

BRCA1-229, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 375 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-229ENST00000621897 TELO2Q9Y4R8 837 aa6.86□□□□□ -1.31
BRCA1-229ENST00000621897 KRIT1O00522 736 aa6.85□□□□□ -1.31
BRCA1-229ENST00000621897 PRICKLE3O43900 615 aaPredicted RBP6.85□□□□□ -1.31
BRCA1-229ENST00000621897 NOBOXO60393 691 aa6.85□□□□□ -1.31
BRCA1-229ENST00000621897 FOXD2O60548 495 aaPredicted RBP6.85□□□□□ -1.31
BRCA1-229ENST00000621897 GNAT1P11488 350 aa6.85□□□□□ -1.31
BRCA1-229ENST00000621897 RPL13P26373 211 aaKnown RBP6.85□□□□□ -1.31
BRCA1-229ENST00000621897 SUMO1P63165 101 aaKnown RBP6.85□□□□□ -1.31
BRCA1-229ENST00000621897 GRIN1Q05586 938 aa6.85□□□□□ -1.31
BRCA1-229ENST00000621897 CYP4F22Q6NT55 531 aa6.85□□□□□ -1.31
BRCA1-229ENST00000621897 FRMD5Q7Z6J6 570 aa6.85□□□□□ -1.31
BRCA1-229ENST00000621897 TTLL6Q8N841 843 aa6.85□□□□□ -1.31
BRCA1-229ENST00000621897 ADAMTS17Q8TE56 1095 aa6.85□□□□□ -1.31
BRCA1-229ENST00000621897 PCDH18Q9HCL0 1135 aa6.85□□□□□ -1.31
BRCA1-229ENST00000621897 NGRNQ9NPE2 291 aaKnown RBP6.85□□□□□ -1.31
BRCA1-229ENST00000621897 MAFKO60675 156 aa6.84□□□□□ -1.31
BRCA1-229ENST00000621897 TUSC3Q13454 348 aa6.84□□□□□ -1.31
BRCA1-229ENST00000621897 PROSER1Q86XN7 944 aa6.84□□□□□ -1.31
BRCA1-229ENST00000621897 UHMK1Q8TAS1 419 aaKnown RBP6.84□□□□□ -1.31
BRCA1-229ENST00000621897 TEPSINQ96N21 525 aa6.84□□□□□ -1.31
BRCA1-229ENST00000621897 SRPK1Q96SB4 655 aaKnown RBP6.84□□□□□ -1.31
BRCA1-229ENST00000621897 DNAJC2Q99543 621 aaKnown RBP6.84□□□□□ -1.31
BRCA1-229ENST00000621897 DNAJC7Q99615 494 aa6.84□□□□□ -1.31
BRCA1-229ENST00000621897 DUSP10Q9Y6W6 482 aa6.84□□□□□ -1.31
BRCA1-229ENST00000621897 NCANO14594 1321 aa6.83□□□□□ -1.32
BRCA1-229ENST00000621897 B8ZZF3 427 aa6.83□□□□□ -1.32
BRCA1-229ENST00000621897 FAM47E-STBD1D6RA91 191 aa6.83□□□□□ -1.32
BRCA1-229ENST00000621897 SF3A1Q15459 793 aaKnown RBP6.83□□□□□ -1.32
BRCA1-229ENST00000621897 TMC5Q6UXY8 1006 aa6.83□□□□□ -1.32
BRCA1-229ENST00000621897 MAMDC2Q7Z304 686 aaPredicted RBP6.83□□□□□ -1.32
BRCA1-229ENST00000621897 LRP10Q7Z4F1 713 aa6.83□□□□□ -1.32
BRCA1-229ENST00000621897 TTLL11Q8NHH1 800 aa6.83□□□□□ -1.32
BRCA1-229ENST00000621897 PTPRN2Q92932 1015 aa6.83□□□□□ -1.32
BRCA1-229ENST00000621897 KISS1RQ969F8 398 aaPredicted RBP6.83□□□□□ -1.32
BRCA1-229ENST00000621897 ALG1Q9BT22 464 aa6.83□□□□□ -1.32
BRCA1-229ENST00000621897 DHRS4Q9BTZ2 278 aa6.83□□□□□ -1.32
BRCA1-229ENST00000621897 USP40Q9NVE5 1235 aa6.83□□□□□ -1.32
BRCA1-229ENST00000621897 MRPS23Q9Y3D9 190 aaKnown RBP6.83□□□□□ -1.32
BRCA1-229ENST00000621897 PCDHA8Q9Y5H6 950 aa6.83□□□□□ -1.32
BRCA1-229ENST00000621897 TCRBV5S4A2TA0A5A2 114 aa6.82□□□□□ -1.32
BRCA1-229ENST00000621897 DDX3XO00571 662 aaKnown RBP eCLIP6.82□□□□□ -1.32
BRCA1-229ENST00000621897 PRRG2O14669 202 aa6.82□□□□□ -1.32
BRCA1-229ENST00000621897 SPIRE1Q08AE8 756 aa6.82□□□□□ -1.32
BRCA1-229ENST00000621897 DPH6Q7L8W6 267 aa6.82□□□□□ -1.32
BRCA1-229ENST00000621897 MTDHQ86UE4 582 aaKnown RBP6.82□□□□□ -1.32
BRCA1-229ENST00000621897 FERMT3Q86UX7 667 aa6.82□□□□□ -1.32
BRCA1-229ENST00000621897 CXorf38Q8TB03 319 aa6.82□□□□□ -1.32
BRCA1-229ENST00000621897 SH3RF2Q8TEC5 729 aa6.82□□□□□ -1.32
BRCA1-229ENST00000621897 DDX1Q92499 740 aaKnown RBP6.82□□□□□ -1.32
BRCA1-229ENST00000621897 CD244Q9BZW8 370 aa6.82□□□□□ -1.32
BRCA1-229ENST00000621897 DSEQ9UL01 958 aa6.82□□□□□ -1.32
BRCA1-229ENST00000621897 AQP7O14520 342 aa6.81□□□□□ -1.32
BRCA1-229ENST00000621897 ZNF28P17035 718 aa6.81□□□□□ -1.32
BRCA1-229ENST00000621897 BUD31P41223 144 aaPredicted RBP6.81□□□□□ -1.32
BRCA1-229ENST00000621897 GJA9P57773 515 aa6.81□□□□□ -1.32
BRCA1-229ENST00000621897 LONRF2Q1L5Z9 754 aa6.81□□□□□ -1.32
BRCA1-229ENST00000621897 RGL3Q3MIN7 710 aa6.81□□□□□ -1.32
BRCA1-229ENST00000621897 PHF19Q5T6S3 580 aa6.81□□□□□ -1.32
BRCA1-229ENST00000621897 MCTP2Q6DN12 878 aa6.81□□□□□ -1.32
BRCA1-229ENST00000621897 TRIM48Q8IWZ4 208 aa6.81□□□□□ -1.32
BRCA1-229ENST00000621897 SREK1Q8WXA9 508 aaKnown RBP6.81□□□□□ -1.32
BRCA1-229ENST00000621897 MKL1Q969V6 931 aa6.81□□□□□ -1.32
BRCA1-229ENST00000621897 IPO9Q96P70 1041 aaKnown RBP6.81□□□□□ -1.32
BRCA1-229ENST00000621897 LNPKQ9C0E8 428 aa6.81□□□□□ -1.32
BRCA1-229ENST00000621897 HSPBP1Q9NZL4 362 aa6.81□□□□□ -1.32
BRCA1-229ENST00000621897 CROTQ9UKG9 612 aa6.81□□□□□ -1.32
BRCA1-229ENST00000621897 PCDHA9Q9Y5H5 950 aa6.81□□□□□ -1.32
BRCA1-229ENST00000621897 ARVCFO00192 962 aa6.8□□□□□ -1.32
BRCA1-229ENST00000621897 FAHP16930 419 aa6.8□□□□□ -1.32
BRCA1-229ENST00000621897 SYN1P17600 705 aa6.8□□□□□ -1.32
BRCA1-229ENST00000621897 CNR2P34972 360 aa6.8□□□□□ -1.32
BRCA1-229ENST00000621897 MLLT6P55198 1093 aaPredicted RBP6.8□□□□□ -1.32
BRCA1-229ENST00000621897 GABREP78334 506 aa6.8□□□□□ -1.32
BRCA1-229ENST00000621897 GUCY1A3Q02108 690 aa6.8□□□□□ -1.32
BRCA1-229ENST00000621897 PAK1Q13153 545 aa6.8□□□□□ -1.32
BRCA1-229ENST00000621897 SKOR2Q2VWA4 1001 aaPredicted RBP6.8□□□□□ -1.32
BRCA1-229ENST00000621897 PAN2Q504Q3 1202 aaKnown RBP6.8□□□□□ -1.32
BRCA1-229ENST00000621897 JMYQ8N9B5 988 aa6.8□□□□□ -1.32
BRCA1-229ENST00000621897 TXNDC5Q8NBS9 432 aaKnown RBP6.8□□□□□ -1.32
BRCA1-229ENST00000621897 PCDH19Q8TAB3 1148 aa6.8□□□□□ -1.32
BRCA1-229ENST00000621897 ZCCHC14Q8WYQ9 949 aaKnown RBP6.8□□□□□ -1.32
BRCA1-229ENST00000621897 KRTAP4-9Q9BYQ8 210 aa6.8□□□□□ -1.32
BRCA1-229ENST00000621897 ACOT7O00154 380 aa6.79□□□□□ -1.32
BRCA1-229ENST00000621897 WNT9AO14904 365 aa6.79□□□□□ -1.32
BRCA1-229ENST00000621897 CRTAMO95727 393 aa6.79□□□□□ -1.32
BRCA1-229ENST00000621897 PYGMP11217 842 aa6.79□□□□□ -1.32
BRCA1-229ENST00000621897 EPHA5P54756 1037 aa6.79□□□□□ -1.32
BRCA1-229ENST00000621897 ZFYVE27Q5T4F4 411 aa6.79□□□□□ -1.32
BRCA1-229ENST00000621897 SOGA3Q5TF21 947 aa6.79□□□□□ -1.32
BRCA1-229ENST00000621897 PRAMEF18Q5VWM3 479 aa6.79□□□□□ -1.32
BRCA1-229ENST00000621897 KCTD1Q719H9 257 aa6.79□□□□□ -1.32
BRCA1-229ENST00000621897 PNPLA5Q7Z6Z6 429 aaPredicted RBP6.79□□□□□ -1.32
BRCA1-229ENST00000621897 LILRB2Q8N423 598 aa6.79□□□□□ -1.32
BRCA1-229ENST00000621897 CLIC6Q96NY7 704 aa6.79□□□□□ -1.32
BRCA1-229ENST00000621897 TMEM209Q96SK2 561 aa6.79□□□□□ -1.32
BRCA1-229ENST00000621897 PDGFDQ9GZP0 370 aaPredicted RBP6.79□□□□□ -1.32
BRCA1-229ENST00000621897 OSBPL2Q9H1P3 480 aa6.79□□□□□ -1.32
BRCA1-229ENST00000621897 SLC52A2Q9HAB3 445 aa6.79□□□□□ -1.32
BRCA1-229ENST00000621897 CBLCQ9ULV8 474 aa6.79□□□□□ -1.32
BRCA1-229ENST00000621897 AMY2AP04746 511 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms