RNA–Protein interactions for RNA: ENST00000621474.4

CBWD3-217, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-217ENST00000621474 BRMS1Q9HCU9 246 aa16.28■□□□□ 0.2
CBWD3-217ENST00000621474 PKD2L1Q9P0L9 805 aa16.28■□□□□ 0.2
CBWD3-217ENST00000621474 DHX15O43143 795 aaKnown RBP16.27■□□□□ 0.2
CBWD3-217ENST00000621474 ZNF76P36508 570 aa16.27■□□□□ 0.2
CBWD3-217ENST00000621474 SNX17Q15036 470 aa16.27■□□□□ 0.2
CBWD3-217ENST00000621474 MOXD1Q6UVY6 613 aa16.27■□□□□ 0.2
CBWD3-217ENST00000621474 NEK8Q86SG6 692 aa16.27■□□□□ 0.2
CBWD3-217ENST00000621474 HSCBQ8IWL3 235 aa16.27■□□□□ 0.2
CBWD3-217ENST00000621474 UIMC1Q96RL1 719 aa16.27■□□□□ 0.2
CBWD3-217ENST00000621474 FOXP1Q9H334 677 aaPredicted RBP16.27■□□□□ 0.2
CBWD3-217ENST00000621474 SLC37A4O43826 429 aa16.27■□□□□ 0.19
CBWD3-217ENST00000621474 U2AF2P26368 475 aaKnown RBP eCLIP16.27■□□□□ 0.19
CBWD3-217ENST00000621474 SETQ01105 290 aaPredicted RBP16.27■□□□□ 0.19
CBWD3-217ENST00000621474 LRRC26Q2I0M4 334 aa16.27■□□□□ 0.19
CBWD3-217ENST00000621474 LETM2Q2VYF4 491 aa16.27■□□□□ 0.19
CBWD3-217ENST00000621474 Q4G0T1 1027 aa16.27■□□□□ 0.19
CBWD3-217ENST00000621474 SPATA33Q96N06 139 aa16.27■□□□□ 0.19
CBWD3-217ENST00000621474 GPR20Q99678 358 aa16.27■□□□□ 0.19
CBWD3-217ENST00000621474 MLXIPQ9HAP2 919 aa16.27■□□□□ 0.19
CBWD3-217ENST00000621474 FOXD4L1Q9NU39 408 aa16.27■□□□□ 0.19
CBWD3-217ENST00000621474 KIF3AQ9Y496 699 aa16.27■□□□□ 0.19
CBWD3-217ENST00000621474 GRIN2DO15399 1336 aa16.26■□□□□ 0.19
CBWD3-217ENST00000621474 NFASCO94856 1347 aa16.26■□□□□ 0.19
CBWD3-217ENST00000621474 IPO5O00410 1097 aaKnown RBP16.26■□□□□ 0.19
CBWD3-217ENST00000621474 MSH4O15457 936 aa16.26■□□□□ 0.19
CBWD3-217ENST00000621474 ATN1P54259 1190 aaPredicted RBP16.26■□□□□ 0.19
CBWD3-217ENST00000621474 PPP4R3AQ6IN85 833 aa16.26■□□□□ 0.19
CBWD3-217ENST00000621474 SLC39A5Q6ZMH5 540 aa16.26■□□□□ 0.19
CBWD3-217ENST00000621474 KAT2BQ92831 832 aa16.26■□□□□ 0.19
CBWD3-217ENST00000621474 GJA10Q969M2 543 aa16.26■□□□□ 0.19
CBWD3-217ENST00000621474 PSMC6P62333 389 aa16.25■□□□□ 0.19
CBWD3-217ENST00000621474 SAFBQ15424 915 aaKnown RBP eCLIP16.25■□□□□ 0.19
CBWD3-217ENST00000621474 C1orf53Q5VUE5 145 aa16.25■□□□□ 0.19
CBWD3-217ENST00000621474 NOSTRINQ8IVI9 506 aa16.25■□□□□ 0.19
CBWD3-217ENST00000621474 GIMAP8Q8ND71 665 aaPredicted RBP16.25■□□□□ 0.19
CBWD3-217ENST00000621474 ETNPPLQ8TBG4 499 aa16.25■□□□□ 0.19
CBWD3-217ENST00000621474 GLT1D1Q96MS3 346 aa16.25■□□□□ 0.19
CBWD3-217ENST00000621474 C16orf70Q9BSU1 422 aa16.25■□□□□ 0.19
CBWD3-217ENST00000621474 JPH1Q9HDC5 661 aaPredicted RBP16.25■□□□□ 0.19
CBWD3-217ENST00000621474 STARD7Q9NQZ5 370 aa16.25■□□□□ 0.19
CBWD3-217ENST00000621474 ELP1O95163 1332 aa16.25■□□□□ 0.19
CBWD3-217ENST00000621474 CCNE2O96020 404 aa16.24■□□□□ 0.19
CBWD3-217ENST00000621474 MYL3P08590 195 aa16.24■□□□□ 0.19
CBWD3-217ENST00000621474 ZNF286BP0CG31 522 aa16.24■□□□□ 0.19
CBWD3-217ENST00000621474 SP4Q02446 784 aa16.24■□□□□ 0.19
CBWD3-217ENST00000621474 DGKDQ16760 1214 aa16.24■□□□□ 0.19
CBWD3-217ENST00000621474 LARP1BQ659C4 914 aaKnown RBP16.24■□□□□ 0.19
CBWD3-217ENST00000621474 ZNF577Q9BSK1 485 aa16.24■□□□□ 0.19
CBWD3-217ENST00000621474 KCNMB3Q9NPA1 279 aa16.24■□□□□ 0.19
CBWD3-217ENST00000621474 POLR3EQ9NVU0 708 aa16.24■□□□□ 0.19
CBWD3-217ENST00000621474 DDX25Q9UHL0 483 aaKnown RBP16.24■□□□□ 0.19
CBWD3-217ENST00000621474 TRIP12Q14669 1992 aaPredicted RBP16.23■□□□□ 0.19
CBWD3-217ENST00000621474 GSTTP1A0A1W2PQM5 241 aa16.23■□□□□ 0.19
CBWD3-217ENST00000621474 ZEB2O60315 1214 aa16.23■□□□□ 0.19
CBWD3-217ENST00000621474 CCNT1O60563 726 aaKnown RBP16.23■□□□□ 0.19
CBWD3-217ENST00000621474 PPFIA4O75335 1185 aa16.23■□□□□ 0.19
CBWD3-217ENST00000621474 F2P00734 622 aa16.23■□□□□ 0.19
CBWD3-217ENST00000621474 SLC43A3Q8NBI5 491 aa16.23■□□□□ 0.19
CBWD3-217ENST00000621474 PPP1R13LQ8WUF5 828 aa16.23■□□□□ 0.19
CBWD3-217ENST00000621474 SLC9A2Q9UBY0 812 aa16.23■□□□□ 0.19
CBWD3-217ENST00000621474 RANBP2P49792 3224 aaKnown RBP16.23■□□□□ 0.19
CBWD3-217ENST00000621474 CEP290O15078 2479 aa16.23■□□□□ 0.19
CBWD3-217ENST00000621474 CABYRO75952 493 aa16.23■□□□□ 0.19
CBWD3-217ENST00000621474 LGALS2P05162 132 aa16.23■□□□□ 0.19
CBWD3-217ENST00000621474 GCFC2P16383 781 aaKnown RBP16.23■□□□□ 0.19
CBWD3-217ENST00000621474 CDK7P50613 346 aa16.23■□□□□ 0.19
CBWD3-217ENST00000621474 TOB1P50616 345 aaPredicted RBP16.23■□□□□ 0.19
CBWD3-217ENST00000621474 MLLT1Q03111 559 aaPredicted RBP16.23■□□□□ 0.19
CBWD3-217ENST00000621474 BRDTQ58F21 947 aaPredicted RBP16.23■□□□□ 0.19
CBWD3-217ENST00000621474 TRIM50Q86XT4 487 aa16.23■□□□□ 0.19
CBWD3-217ENST00000621474 POTEDQ86YR6 584 aa16.23■□□□□ 0.19
CBWD3-217ENST00000621474 HAS1Q92839 578 aa16.23■□□□□ 0.19
CBWD3-217ENST00000621474 SLC5A5Q92911 643 aa16.23■□□□□ 0.19
CBWD3-217ENST00000621474 MTG1Q9BT17 334 aaPredicted RBP16.23■□□□□ 0.19
CBWD3-217ENST00000621474 MYH9P35579 1960 aaKnown RBP16.22■□□□□ 0.19
CBWD3-217ENST00000621474 DDX39AO00148 427 aaKnown RBP16.22■□□□□ 0.19
CBWD3-217ENST00000621474 HAS3O00219 553 aa16.22■□□□□ 0.19
CBWD3-217ENST00000621474 NOP56O00567 594 aaKnown RBP16.22■□□□□ 0.19
CBWD3-217ENST00000621474 KPNA6O60684 536 aa16.22■□□□□ 0.19
CBWD3-217ENST00000621474 PSMD10O75832 226 aa16.22■□□□□ 0.19
CBWD3-217ENST00000621474 ATG7O95352 703 aa16.22■□□□□ 0.19
CBWD3-217ENST00000621474 SYT1P21579 422 aa16.22■□□□□ 0.19
CBWD3-217ENST00000621474 TCF7P36402 384 aaPredicted RBP16.22■□□□□ 0.19
CBWD3-217ENST00000621474 ITGA7Q13683 1181 aa16.22■□□□□ 0.19
CBWD3-217ENST00000621474 TRIM60Q495X7 471 aa16.22■□□□□ 0.19
CBWD3-217ENST00000621474 B3GNT9Q6UX72 402 aa16.22■□□□□ 0.19
CBWD3-217ENST00000621474 PCYT2Q99447 389 aa16.22■□□□□ 0.19
CBWD3-217ENST00000621474 SDF4Q9BRK5 362 aa16.22■□□□□ 0.19
CBWD3-217ENST00000621474 HTATIP2Q9BUP3 242 aa16.22■□□□□ 0.19
CBWD3-217ENST00000621474 PCDH10Q9P2E7 1040 aa16.22■□□□□ 0.19
CBWD3-217ENST00000621474 A0A0U1RQG5 324 aaPredicted RBP16.21■□□□□ 0.19
CBWD3-217ENST00000621474 H3BQV1 296 aa16.21■□□□□ 0.19
CBWD3-217ENST00000621474 RTP1P59025 263 aa16.21■□□□□ 0.19
CBWD3-217ENST00000621474 ACTR2P61160 394 aa16.21■□□□□ 0.19
CBWD3-217ENST00000621474 NBR1Q14596 966 aa16.21■□□□□ 0.19
CBWD3-217ENST00000621474 TBC1D22BQ9NU19 505 aa16.21■□□□□ 0.19
CBWD3-217ENST00000621474 IGKV6D-21A0A0A0MT36 114 aa16.2■□□□□ 0.18
CBWD3-217ENST00000621474 ARVCFO00192 962 aa16.2■□□□□ 0.18
CBWD3-217ENST00000621474 NBPF20Q3BBV1 942 aa16.2■□□□□ 0.18
CBWD3-217ENST00000621474 ABHD15Q6UXT9 468 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms