RNA–Protein interactions for RNA: ENST00000620770.1

MUC1-229, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best)

Gene MUC1, Length 572 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-229ENST00000620770 ZNF174Q15697 407 aa15.3■□□□□ 0.04
MUC1-229ENST00000620770 FOXD4L6Q3SYB3 417 aaPredicted RBP15.3■□□□□ 0.04
MUC1-229ENST00000620770 KIAA1217Q5T5P2 1943 aa15.3■□□□□ 0.04
MUC1-229ENST00000620770 LHX8Q68G74 356 aa15.3■□□□□ 0.04
MUC1-229ENST00000620770 FOXD4L3Q6VB84 417 aaPredicted RBP15.3■□□□□ 0.04
MUC1-229ENST00000620770 CYFIP1Q7L576 1253 aa15.3■□□□□ 0.04
MUC1-229ENST00000620770 BRAPQ7Z569 592 aa15.3■□□□□ 0.04
MUC1-229ENST00000620770 POTEDQ86YR6 584 aa15.3■□□□□ 0.04
MUC1-229ENST00000620770 DHX37Q8IY37 1157 aaKnown RBP15.3■□□□□ 0.04
MUC1-229ENST00000620770 BCAS3Q9H6U6 928 aa15.3■□□□□ 0.04
MUC1-229ENST00000620770 MLXIPQ9HAP2 919 aa15.3■□□□□ 0.04
MUC1-229ENST00000620770 GNEQ9Y223 722 aaKnown RBP15.3■□□□□ 0.04
MUC1-229ENST00000620770 CYP3A7-CYP3A51PA0A087WV96 503 aa15.29■□□□□ 0.04
MUC1-229ENST00000620770 MYADML2A6NDP7 307 aa15.29■□□□□ 0.04
MUC1-229ENST00000620770 NKRFO15226 690 aaKnown RBP eCLIP15.29■□□□□ 0.04
MUC1-229ENST00000620770 MSH4O15457 936 aa15.29■□□□□ 0.04
MUC1-229ENST00000620770 NEMFO60524 1076 aa15.29■□□□□ 0.04
MUC1-229ENST00000620770 KCNA2P16389 499 aa15.29■□□□□ 0.04
MUC1-229ENST00000620770 CYP3A7P24462 503 aa15.29■□□□□ 0.04
MUC1-229ENST00000620770 TOB1P50616 345 aaPredicted RBP15.29■□□□□ 0.04
MUC1-229ENST00000620770 BEX3Q00994 111 aa15.29■□□□□ 0.04
MUC1-229ENST00000620770 ARHGAP1Q07960 439 aa15.29■□□□□ 0.04
MUC1-229ENST00000620770 NEDD9Q14511 834 aa15.29■□□□□ 0.04
MUC1-229ENST00000620770 Q4G0T1 1027 aa15.29■□□□□ 0.04
MUC1-229ENST00000620770 FAM173BQ6P4H8 233 aa15.29■□□□□ 0.04
MUC1-229ENST00000620770 MOXD1Q6UVY6 613 aa15.29■□□□□ 0.04
MUC1-229ENST00000620770 SDF4Q9BRK5 362 aa15.29■□□□□ 0.04
MUC1-229ENST00000620770 SPC25Q9HBM1 224 aa15.29■□□□□ 0.04
MUC1-229ENST00000620770 A0A1W2PPC1 479 aa15.28■□□□□ 0.04
MUC1-229ENST00000620770 IPO5O00410 1097 aaKnown RBP15.28■□□□□ 0.04
MUC1-229ENST00000620770 NOP56O00567 594 aaKnown RBP15.28■□□□□ 0.04
MUC1-229ENST00000620770 F13A1P00488 732 aa15.28■□□□□ 0.04
MUC1-229ENST00000620770 TGFB3P10600 412 aa15.28■□□□□ 0.04
MUC1-229ENST00000620770 COL6A1P12109 1028 aa15.28■□□□□ 0.04
MUC1-229ENST00000620770 TRAPPC10P48553 1259 aa15.28■□□□□ 0.04
MUC1-229ENST00000620770 ITGB3BPQ13352 177 aaPredicted RBP15.28■□□□□ 0.04
MUC1-229ENST00000620770 CALCRLQ16602 461 aa15.28■□□□□ 0.04
MUC1-229ENST00000620770 FSCN1Q16658 493 aaKnown RBP15.28■□□□□ 0.04
MUC1-229ENST00000620770 RILPL1Q5EBL4 403 aa15.28■□□□□ 0.04
MUC1-229ENST00000620770 CELF3Q5SZQ8 465 aaKnown RBP15.28■□□□□ 0.04
MUC1-229ENST00000620770 MYSM1Q5VVJ2 828 aa15.28■□□□□ 0.04
MUC1-229ENST00000620770 PPP4R3AQ6IN85 833 aa15.28■□□□□ 0.04
MUC1-229ENST00000620770 AFG1LQ8WV93 481 aa15.28■□□□□ 0.04
MUC1-229ENST00000620770 SPATA33Q96N06 139 aa15.28■□□□□ 0.04
MUC1-229ENST00000620770 MBOAT7Q96N66 472 aa15.28■□□□□ 0.04
MUC1-229ENST00000620770 PRO3102Q9H379 93 aa15.28■□□□□ 0.04
MUC1-229ENST00000620770 TCEAL9Q9UHQ7 104 aa15.28■□□□□ 0.04
MUC1-229ENST00000620770 TELO2Q9Y4R8 837 aa15.28■□□□□ 0.04
MUC1-229ENST00000620770 PCDHB6Q9Y5E3 794 aa15.28■□□□□ 0.04
MUC1-229ENST00000620770 RANBP2P49792 3224 aaKnown RBP15.27■□□□□ 0.04
MUC1-229ENST00000620770 MAFGO15525 162 aa15.27■□□□□ 0.04
MUC1-229ENST00000620770 CHMP2AO43633 222 aa15.27■□□□□ 0.04
MUC1-229ENST00000620770 GAS7O60861 476 aa15.27■□□□□ 0.04
MUC1-229ENST00000620770 ADAMTS4O75173 837 aa15.27■□□□□ 0.04
MUC1-229ENST00000620770 GJA9P57773 515 aa15.27■□□□□ 0.04
MUC1-229ENST00000620770 LAMC2Q13753 1193 aa15.27■□□□□ 0.04
MUC1-229ENST00000620770 LRRC41Q15345 812 aa15.27■□□□□ 0.04
MUC1-229ENST00000620770 GNASQ5JWF2 1037 aa15.27■□□□□ 0.04
MUC1-229ENST00000620770 LRCH2Q5VUJ6 765 aa15.27■□□□□ 0.04
MUC1-229ENST00000620770 METTL7BQ6UX53 244 aa15.27■□□□□ 0.04
MUC1-229ENST00000620770 GIMAP8Q8ND71 665 aaPredicted RBP15.27■□□□□ 0.04
MUC1-229ENST00000620770 ETNPPLQ8TBG4 499 aa15.27■□□□□ 0.04
MUC1-229ENST00000620770 SENP7Q9BQF6 1050 aa15.27■□□□□ 0.04
MUC1-229ENST00000620770 UPF3AQ9H1J1 476 aaKnown RBP15.27■□□□□ 0.04
MUC1-229ENST00000620770 TMEM60Q9H2L4 133 aa15.27■□□□□ 0.04
MUC1-229ENST00000620770 ZSCAN16Q9H4T2 348 aaPredicted RBP15.27■□□□□ 0.04
MUC1-229ENST00000620770 JPH1Q9HDC5 661 aaPredicted RBP15.27■□□□□ 0.04
MUC1-229ENST00000620770 ZMYND8Q9ULU4 1186 aaPredicted RBP15.27■□□□□ 0.04
MUC1-229ENST00000620770 DNM1LO00429 736 aa15.26■□□□□ 0.03
MUC1-229ENST00000620770 BRD1O95696 1058 aa15.26■□□□□ 0.03
MUC1-229ENST00000620770 MYL3P08590 195 aa15.26■□□□□ 0.03
MUC1-229ENST00000620770 PDIA4P13667 645 aaKnown RBP15.26■□□□□ 0.03
MUC1-229ENST00000620770 CPT1AP50416 773 aa15.26■□□□□ 0.03
MUC1-229ENST00000620770 CEBPZQ03701 1054 aaKnown RBP15.26■□□□□ 0.03
MUC1-229ENST00000620770 BRDTQ58F21 947 aaPredicted RBP15.26■□□□□ 0.03
MUC1-229ENST00000620770 RNF180Q86T96 592 aa15.26■□□□□ 0.03
MUC1-229ENST00000620770 SLC5A5Q92911 643 aa15.26■□□□□ 0.03
MUC1-229ENST00000620770 IPO9Q96P70 1041 aaKnown RBP15.26■□□□□ 0.03
MUC1-229ENST00000620770 TEKT3Q9BXF9 490 aa15.26■□□□□ 0.03
MUC1-229ENST00000620770 FTOQ9C0B1 505 aaKnown RBP eCLIP15.26■□□□□ 0.03
MUC1-229ENST00000620770 SLC9A2Q9UBY0 812 aa15.26■□□□□ 0.03
MUC1-229ENST00000620770 ZDHHC9Q9Y397 364 aa15.26■□□□□ 0.03
MUC1-229ENST00000620770 Q9Y3F1 56 aa15.26■□□□□ 0.03
MUC1-229ENST00000620770 DOCK5Q9H7D0 1870 aa15.26■□□□□ 0.03
MUC1-229ENST00000620770 NFASCO94856 1347 aa15.25■□□□□ 0.03
MUC1-229ENST00000620770 KBTBD13C9JR72 458 aa15.25■□□□□ 0.03
MUC1-229ENST00000620770 CTAGE5O15320 804 aa15.25■□□□□ 0.03
MUC1-229ENST00000620770 BAG4O95429 457 aaKnown RBP15.25■□□□□ 0.03
MUC1-229ENST00000620770 MMP3P08254 477 aa15.25■□□□□ 0.03
MUC1-229ENST00000620770 OR52Z1P0C646 297 aa15.25■□□□□ 0.03
MUC1-229ENST00000620770 CHMP4BP1P59074 171 aa15.25■□□□□ 0.03
MUC1-229ENST00000620770 HSDL1Q3SXM5 330 aa15.25■□□□□ 0.03
MUC1-229ENST00000620770 ARRDC4Q8NCT1 418 aa15.25■□□□□ 0.03
MUC1-229ENST00000620770 KCNMB3Q9NPA1 279 aa15.25■□□□□ 0.03
MUC1-229ENST00000620770 TBC1D22BQ9NU19 505 aa15.25■□□□□ 0.03
MUC1-229ENST00000620770 DHX15O43143 795 aaKnown RBP15.24■□□□□ 0.03
MUC1-229ENST00000620770 CCNE2O96020 404 aa15.24■□□□□ 0.03
MUC1-229ENST00000620770 ZNF286BP0CG31 522 aa15.24■□□□□ 0.03
MUC1-229ENST00000620770 SYN1P17600 705 aa15.24■□□□□ 0.03
MUC1-229ENST00000620770 DDIT3P35638 169 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms