RNA–Protein interactions for RNA: ENST00000612795.1

CSNK1E-215, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 885 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-215ENST00000612795 H3BRB1 525 aa20.02■□□□□ 0.8
CSNK1E-215ENST00000612795 TREHO43280 583 aa20.02■□□□□ 0.8
CSNK1E-215ENST00000612795 CAND2O75155 1236 aa20.02■□□□□ 0.8
CSNK1E-215ENST00000612795 SMIM10L2AP0DMW4 78 aa20.02■□□□□ 0.8
CSNK1E-215ENST00000612795 SMIM10L2BP0DMW5 78 aa20.02■□□□□ 0.8
CSNK1E-215ENST00000612795 UBA1P22314 1058 aaKnown RBP20.02■□□□□ 0.8
CSNK1E-215ENST00000612795 HSD17B4P51659 736 aa20.02■□□□□ 0.8
CSNK1E-215ENST00000612795 NMIQ13287 307 aaPredicted RBP20.02■□□□□ 0.8
CSNK1E-215ENST00000612795 SMAD2Q15796 467 aaKnown RBP20.02■□□□□ 0.8
CSNK1E-215ENST00000612795 APBB2Q92870 758 aa20.02■□□□□ 0.8
CSNK1E-215ENST00000612795 AMNQ9BXJ7 453 aa20.02■□□□□ 0.8
CSNK1E-215ENST00000612795 TUT1Q9H6E5 874 aaKnown RBP20.02■□□□□ 0.8
CSNK1E-215ENST00000612795 MUTYHQ9UIF7 546 aa20.02■□□□□ 0.8
CSNK1E-215ENST00000612795 TECTAO75443 2155 aa20.01■□□□□ 0.79
CSNK1E-215ENST00000612795 TRIM6-TRIM34B2RNG4 842 aa20.01■□□□□ 0.79
CSNK1E-215ENST00000612795 NOP56O00567 594 aaKnown RBP20.01■□□□□ 0.79
CSNK1E-215ENST00000612795 KDM4AO75164 1064 aa20.01■□□□□ 0.79
CSNK1E-215ENST00000612795 RGS20O76081 388 aa20.01■□□□□ 0.79
CSNK1E-215ENST00000612795 LGALS2P05162 132 aa20.01■□□□□ 0.79
CSNK1E-215ENST00000612795 IL17RAQ96F46 866 aa20.01■□□□□ 0.79
CSNK1E-215ENST00000612795 C11orf84Q9BUA3 381 aaPredicted RBP20.01■□□□□ 0.79
CSNK1E-215ENST00000612795 LMAN2LQ9H0V9 348 aa20.01■□□□□ 0.79
CSNK1E-215ENST00000612795 JMJD4Q9H9V9 463 aa20.01■□□□□ 0.79
CSNK1E-215ENST00000612795 RWDD3Q9Y3V2 267 aa20.01■□□□□ 0.79
CSNK1E-215ENST00000612795 PCDHB15Q9Y5E8 787 aa20.01■□□□□ 0.79
CSNK1E-215ENST00000612795 ZNF213O14771 459 aa20■□□□□ 0.79
CSNK1E-215ENST00000612795 MBTPS2O43462 519 aa20■□□□□ 0.79
CSNK1E-215ENST00000612795 CSPG5O95196 566 aa20■□□□□ 0.79
CSNK1E-215ENST00000612795 CCND2P30279 289 aa20■□□□□ 0.79
CSNK1E-215ENST00000612795 HOXC8P31273 242 aa20■□□□□ 0.79
CSNK1E-215ENST00000612795 LTBRP36941 435 aa20■□□□□ 0.79
CSNK1E-215ENST00000612795 MFAP1P55081 439 aaKnown RBP20■□□□□ 0.79
CSNK1E-215ENST00000612795 PGM5Q15124 567 aa20■□□□□ 0.79
CSNK1E-215ENST00000612795 ANKS1AQ92625 1134 aa20■□□□□ 0.79
CSNK1E-215ENST00000612795 OSBPL7Q9BZF2 842 aa20■□□□□ 0.79
CSNK1E-215ENST00000612795 OPLAHO14841 1288 aa19.99■□□□□ 0.79
CSNK1E-215ENST00000612795 RB1P06400 928 aa19.99■□□□□ 0.79
CSNK1E-215ENST00000612795 TGFB3P10600 412 aa19.99■□□□□ 0.79
CSNK1E-215ENST00000612795 GNAT1P11488 350 aa19.99■□□□□ 0.79
CSNK1E-215ENST00000612795 HOXA13P31271 388 aaPredicted RBP19.99■□□□□ 0.79
CSNK1E-215ENST00000612795 NT5C2P49902 561 aa19.99■□□□□ 0.79
CSNK1E-215ENST00000612795 SP2Q02086 613 aa19.99■□□□□ 0.79
CSNK1E-215ENST00000612795 HYAL1Q12794 435 aa19.99■□□□□ 0.79
CSNK1E-215ENST00000612795 SMAD4Q13485 552 aaKnown RBP19.99■□□□□ 0.79
CSNK1E-215ENST00000612795 CTC1Q2NKJ3 1217 aa19.99■□□□□ 0.79
CSNK1E-215ENST00000612795 HERC4Q5GLZ8 1057 aaPredicted RBP19.99■□□□□ 0.79
CSNK1E-215ENST00000612795 ANKRD45Q5TZF3 282 aa19.99■□□□□ 0.79
CSNK1E-215ENST00000612795 IL31RAQ8NI17 732 aa19.99■□□□□ 0.79
CSNK1E-215ENST00000612795 SNX27Q96L92 541 aa19.99■□□□□ 0.79
CSNK1E-215ENST00000612795 ZSCAN10Q96SZ4 725 aaPredicted RBP19.99■□□□□ 0.79
CSNK1E-215ENST00000612795 RNPEPQ9H4A4 650 aa19.99■□□□□ 0.79
CSNK1E-215ENST00000612795 MAP3K20Q9NYL2 800 aaKnown RBP19.99■□□□□ 0.79
CSNK1E-215ENST00000612795 ADGRA3Q8IWK6 1321 aa19.99■□□□□ 0.79
CSNK1E-215ENST00000612795 KMT2EQ8IZD2 1858 aa19.99■□□□□ 0.79
CSNK1E-215ENST00000612795 B4E1Z4 1266 aa19.98■□□□□ 0.79
CSNK1E-215ENST00000612795 C5orf67F2Z3F1 127 aa19.98■□□□□ 0.79
CSNK1E-215ENST00000612795 GRM6O15303 877 aa19.98■□□□□ 0.79
CSNK1E-215ENST00000612795 PDE1AP54750 535 aa19.98■□□□□ 0.79
CSNK1E-215ENST00000612795 GHRHRQ02643 423 aa19.98■□□□□ 0.79
CSNK1E-215ENST00000612795 DLX2Q07687 328 aaPredicted RBP19.98■□□□□ 0.79
CSNK1E-215ENST00000612795 STOX1Q6ZVD7 989 aa19.98■□□□□ 0.79
CSNK1E-215ENST00000612795 VSIG10LQ86VR7 867 aa19.98■□□□□ 0.79
CSNK1E-215ENST00000612795 RNF135Q8IUD6 432 aa19.98■□□□□ 0.79
CSNK1E-215ENST00000612795 ENAHQ8N8S7 591 aaPredicted RBP19.98■□□□□ 0.79
CSNK1E-215ENST00000612795 ZFP91Q96JP5 570 aaPredicted RBP19.98■□□□□ 0.79
CSNK1E-215ENST00000612795 IGFLR1Q9H665 355 aa19.98■□□□□ 0.79
CSNK1E-215ENST00000612795 STXBP3O00186 592 aa19.97■□□□□ 0.79
CSNK1E-215ENST00000612795 TBX10O75333 385 aa19.97■□□□□ 0.79
CSNK1E-215ENST00000612795 BMPR1AP36894 532 aa19.97■□□□□ 0.79
CSNK1E-215ENST00000612795 TICAM2Q86XR7 235 aa19.97■□□□□ 0.79
CSNK1E-215ENST00000612795 GPKOWQ92917 476 aaPredicted RBP eCLIP19.97■□□□□ 0.79
CSNK1E-215ENST00000612795 USP26Q9BXU7 913 aa19.97■□□□□ 0.79
CSNK1E-215ENST00000612795 SETD4Q9NVD3 440 aa19.97■□□□□ 0.79
CSNK1E-215ENST00000612795 CD207Q9UJ71 328 aa19.97■□□□□ 0.79
CSNK1E-215ENST00000612795 BAZ2BQ9UIF8 2168 aaKnown RBP19.97■□□□□ 0.79
CSNK1E-215ENST00000612795 TTC3P53804 2025 aa19.97■□□□□ 0.79
CSNK1E-215ENST00000612795 LOXHD1Q8IVV2 1947 aa19.96■□□□□ 0.79
CSNK1E-215ENST00000612795 ARHGAP4P98171 946 aa19.96■□□□□ 0.79
CSNK1E-215ENST00000612795 GNPTABQ3T906 1256 aa19.96■□□□□ 0.79
CSNK1E-215ENST00000612795 ZNF215Q9UL58 517 aaPredicted RBP19.96■□□□□ 0.79
CSNK1E-215ENST00000612795 PCDHA1Q9Y5I3 950 aa19.96■□□□□ 0.79
CSNK1E-215ENST00000612795 ZBTB5O15062 677 aa19.95■□□□□ 0.78
CSNK1E-215ENST00000612795 NDUFV1P49821 464 aa19.95■□□□□ 0.78
CSNK1E-215ENST00000612795 PTPN5P54829 565 aa19.95■□□□□ 0.78
CSNK1E-215ENST00000612795 FCHSD1Q86WN1 690 aa19.95■□□□□ 0.78
CSNK1E-215ENST00000612795 STAG2Q8N3U4 1231 aa19.95■□□□□ 0.78
CSNK1E-215ENST00000612795 SAMD3Q8N6K7 520 aa19.95■□□□□ 0.78
CSNK1E-215ENST00000612795 EDAQ92838 391 aa19.95■□□□□ 0.78
CSNK1E-215ENST00000612795 PPP2R3CQ969Q6 453 aa19.95■□□□□ 0.78
CSNK1E-215ENST00000612795 RILPL2Q969X0 211 aa19.95■□□□□ 0.78
CSNK1E-215ENST00000612795 PHOX2BQ99453 314 aa19.95■□□□□ 0.78
CSNK1E-215ENST00000612795 UBAC1Q9BSL1 405 aa19.95■□□□□ 0.78
CSNK1E-215ENST00000612795 TRIOO75962 3097 aa19.95■□□□□ 0.78
CSNK1E-215ENST00000612795 GCOM1H8Y6P7 765 aaPredicted RBP19.94■□□□□ 0.78
CSNK1E-215ENST00000612795 LINC01565O15544 149 aa19.94■□□□□ 0.78
CSNK1E-215ENST00000612795 PPP1R11O60927 126 aaPredicted RBP19.94■□□□□ 0.78
CSNK1E-215ENST00000612795 MMP1P03956 469 aa19.94■□□□□ 0.78
CSNK1E-215ENST00000612795 POLR2MP0CAP2 368 aa19.94■□□□□ 0.78
CSNK1E-215ENST00000612795 GHRP10912 638 aa19.94■□□□□ 0.78
CSNK1E-215ENST00000612795 GTF2F1P35269 517 aaKnown RBP eCLIP19.94■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms