RNA–Protein interactions for RNA: ENST00000607212.1

CTSA-216, Transcript of cathepsin A, humanhuman

TSL 4

Gene CTSA, Length 590 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-216ENST00000607212 SENP2Q9HC62 589 aa17.17■□□□□ 0.34
CTSA-216ENST00000607212 SEC63Q9UGP8 760 aaKnown RBP17.17■□□□□ 0.34
CTSA-216ENST00000607212 INSL6Q9Y581 213 aa17.17■□□□□ 0.34
CTSA-216ENST00000607212 E7EWF7 191 aa17.16■□□□□ 0.34
CTSA-216ENST00000607212 LPXNO60711 386 aa17.16■□□□□ 0.34
CTSA-216ENST00000607212 UPP2O95045 317 aa17.16■□□□□ 0.34
CTSA-216ENST00000607212 GNAT1P11488 350 aa17.16■□□□□ 0.34
CTSA-216ENST00000607212 GSPT1P15170 499 aaKnown RBP17.16■□□□□ 0.34
CTSA-216ENST00000607212 ERVK-21P61565 698 aa17.16■□□□□ 0.34
CTSA-216ENST00000607212 NFXL1Q6ZNB6 911 aa17.16■□□□□ 0.34
CTSA-216ENST00000607212 YME1L1Q96TA2 773 aa17.16■□□□□ 0.34
CTSA-216ENST00000607212 C16orf70Q9BSU1 422 aa17.16■□□□□ 0.34
CTSA-216ENST00000607212 SUGCTQ9HAC7 445 aa17.16■□□□□ 0.34
CTSA-216ENST00000607212 ZNF215Q9UL58 517 aaPredicted RBP17.16■□□□□ 0.34
CTSA-216ENST00000607212 TREHO43280 583 aa17.15■□□□□ 0.34
CTSA-216ENST00000607212 HOXD8P13378 290 aaPredicted RBP17.15■□□□□ 0.34
CTSA-216ENST00000607212 PDE4AP27815 886 aa17.15■□□□□ 0.34
CTSA-216ENST00000607212 HIC1Q14526 733 aa17.15■□□□□ 0.34
CTSA-216ENST00000607212 MBTPS1Q14703 1052 aa17.15■□□□□ 0.34
CTSA-216ENST00000607212 SLC35G1Q2M3R5 365 aa17.15■□□□□ 0.34
CTSA-216ENST00000607212 CASC1Q6TDU7 716 aa17.15■□□□□ 0.34
CTSA-216ENST00000607212 EP400NLQ6ZTU2 488 aa17.15■□□□□ 0.34
CTSA-216ENST00000607212 SERINC5Q86VE9 423 aa17.15■□□□□ 0.34
CTSA-216ENST00000607212 RRP36Q96EU6 259 aaKnown RBP17.15■□□□□ 0.34
CTSA-216ENST00000607212 C17orf80Q9BSJ5 609 aa17.15■□□□□ 0.34
CTSA-216ENST00000607212 USP26Q9BXU7 913 aa17.15■□□□□ 0.34
CTSA-216ENST00000607212 LMCD1Q9NZU5 365 aa17.15■□□□□ 0.34
CTSA-216ENST00000607212 CHD7Q9P2D1 2997 aa17.15■□□□□ 0.34
CTSA-216ENST00000607212 FIBPO43427 364 aa17.14■□□□□ 0.33
CTSA-216ENST00000607212 CYTH3O43739 400 aa17.14■□□□□ 0.33
CTSA-216ENST00000607212 STAM2O75886 525 aa17.14■□□□□ 0.33
CTSA-216ENST00000607212 CHMLP26374 656 aa17.14■□□□□ 0.33
CTSA-216ENST00000607212 KIF5BP33176 963 aa17.14■□□□□ 0.33
CTSA-216ENST00000607212 ARHGAP4P98171 946 aa17.14■□□□□ 0.33
CTSA-216ENST00000607212 TRAF7Q6Q0C0 670 aa17.14■□□□□ 0.33
CTSA-216ENST00000607212 METTL7BQ6UX53 244 aa17.14■□□□□ 0.33
CTSA-216ENST00000607212 NLRX1Q86UT6 975 aa17.14■□□□□ 0.33
CTSA-216ENST00000607212 MYL10Q9BUA6 226 aa17.14■□□□□ 0.33
CTSA-216ENST00000607212 RNPEPQ9H4A4 650 aa17.14■□□□□ 0.33
CTSA-216ENST00000607212 BCAS3Q9H6U6 928 aa17.14■□□□□ 0.33
CTSA-216ENST00000607212 SETD4Q9NVD3 440 aa17.14■□□□□ 0.33
CTSA-216ENST00000607212 NCOR1O75376 2440 aa17.13■□□□□ 0.33
CTSA-216ENST00000607212 TROAPQ12815 778 aa17.13■□□□□ 0.33
CTSA-216ENST00000607212 PTPROQ16827 1216 aa17.13■□□□□ 0.33
CTSA-216ENST00000607212 TRIM50Q86XT4 487 aa17.13■□□□□ 0.33
CTSA-216ENST00000607212 CCDC69A6NI79 296 aa17.12■□□□□ 0.33
CTSA-216ENST00000607212 SPATA31C2B4DYI2 1134 aa17.12■□□□□ 0.33
CTSA-216ENST00000607212 KCNA5P22460 613 aa17.12■□□□□ 0.33
CTSA-216ENST00000607212 MRPS9P82933 396 aaKnown RBP17.12■□□□□ 0.33
CTSA-216ENST00000607212 PLEKHG4Q58EX7 1191 aa17.12■□□□□ 0.33
CTSA-216ENST00000607212 USP17L6PQ6QN14 398 aa17.12■□□□□ 0.33
CTSA-216ENST00000607212 ZNF654Q8IZM8 581 aa17.12■□□□□ 0.33
CTSA-216ENST00000607212 FAM122AQ96E09 287 aa17.12■□□□□ 0.33
CTSA-216ENST00000607212 GPR20Q99678 358 aa17.12■□□□□ 0.33
CTSA-216ENST00000607212 UBE2ZQ9H832 354 aaPredicted RBP17.12■□□□□ 0.33
CTSA-216ENST00000607212 PKD2L1Q9P0L9 805 aa17.12■□□□□ 0.33
CTSA-216ENST00000607212 SUPT16HQ9Y5B9 1047 aaKnown RBP17.12■□□□□ 0.33
CTSA-216ENST00000607212 TAF6LQ9Y6J9 622 aa17.12■□□□□ 0.33
CTSA-216ENST00000607212 CAND2O75155 1236 aa17.11■□□□□ 0.33
CTSA-216ENST00000607212 DDAH1O94760 285 aa17.11■□□□□ 0.33
CTSA-216ENST00000607212 SSTR3P32745 418 aaPredicted RBP17.11■□□□□ 0.33
CTSA-216ENST00000607212 ICAM3P32942 547 aa17.11■□□□□ 0.33
CTSA-216ENST00000607212 INPP4AQ96PE3 977 aaPredicted RBP17.11■□□□□ 0.33
CTSA-216ENST00000607212 IFIH1Q9BYX4 1025 aaKnown RBP17.11■□□□□ 0.33
CTSA-216ENST00000607212 EPHX3Q9H6B9 360 aa17.11■□□□□ 0.33
CTSA-216ENST00000607212 RBM8AQ9Y5S9 174 aaKnown RBP17.11■□□□□ 0.33
CTSA-216ENST00000607212 NLRC5Q86WI3 1866 aa17.11■□□□□ 0.33
CTSA-216ENST00000607212 GNAQP50148 359 aa17.1■□□□□ 0.33
CTSA-216ENST00000607212 ANTXR2P58335 489 aa17.1■□□□□ 0.33
CTSA-216ENST00000607212 IRX6P78412 446 aaPredicted RBP17.1■□□□□ 0.33
CTSA-216ENST00000607212 GPM6BQ13491 265 aa17.1■□□□□ 0.33
CTSA-216ENST00000607212 EPC2Q52LR7 807 aa17.1■□□□□ 0.33
CTSA-216ENST00000607212 RAB11FIP4Q86YS3 637 aa17.1■□□□□ 0.33
CTSA-216ENST00000607212 MB21D2Q8IYB1 491 aaPredicted RBP17.1■□□□□ 0.33
CTSA-216ENST00000607212 GIMAP8Q8ND71 665 aaPredicted RBP17.1■□□□□ 0.33
CTSA-216ENST00000607212 APBB2Q92870 758 aa17.1■□□□□ 0.33
CTSA-216ENST00000607212 SAMD11Q96NU1 681 aa17.1■□□□□ 0.33
CTSA-216ENST00000607212 LZTS2Q9BRK4 669 aa17.1■□□□□ 0.33
CTSA-216ENST00000607212 HCN4Q9Y3Q4 1203 aa17.1■□□□□ 0.33
CTSA-216ENST00000607212 FRMPD4Q14CM0 1322 aa17.1■□□□□ 0.33
CTSA-216ENST00000607212 SGSM2O43147 1006 aa17.09■□□□□ 0.33
CTSA-216ENST00000607212 PRC1O43663 620 aa17.09■□□□□ 0.33
CTSA-216ENST00000607212 RXRAP19793 462 aa17.09■□□□□ 0.33
CTSA-216ENST00000607212 MARK3P27448 753 aa17.09■□□□□ 0.33
CTSA-216ENST00000607212 SEMA3FQ13275 785 aa17.09■□□□□ 0.33
CTSA-216ENST00000607212 TIGD5Q53EQ6 642 aa17.09■□□□□ 0.33
CTSA-216ENST00000607212 TMEM31Q5JXX7 168 aa17.09■□□□□ 0.33
CTSA-216ENST00000607212 PCNX4Q63HM2 1172 aa17.09■□□□□ 0.33
CTSA-216ENST00000607212 XRRA1Q6P2D8 792 aa17.09■□□□□ 0.33
CTSA-216ENST00000607212 RSPH3Q86UC2 560 aa17.09■□□□□ 0.33
CTSA-216ENST00000607212 IGDCC4Q8TDY8 1250 aa17.09■□□□□ 0.33
CTSA-216ENST00000607212 LMBR1Q8WVP7 490 aa17.09■□□□□ 0.33
CTSA-216ENST00000607212 GLG1Q92896 1179 aa17.09■□□□□ 0.33
CTSA-216ENST00000607212 MRPL38Q96DV4 380 aaKnown RBP17.09■□□□□ 0.33
CTSA-216ENST00000607212 SPZ1Q9BXG8 430 aa17.09■□□□□ 0.33
CTSA-216ENST00000607212 LY9Q9HBG7 655 aa17.09■□□□□ 0.33
CTSA-216ENST00000607212 SPDYE3A6NKU9 549 aa17.08■□□□□ 0.32
CTSA-216ENST00000607212 CSPG5O95196 566 aa17.08■□□□□ 0.32
CTSA-216ENST00000607212 PLEKHA8P1O95397 391 aa17.08■□□□□ 0.32
CTSA-216ENST00000607212 GHRP10912 638 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms