RNA–Protein interactions for RNA: ENST00000606602.1

SNX5-219, Transcript of sorting nexin 5, humanhuman

TSL 1 (best) BASIC

Gene SNX5, Length 885 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX5-219ENST00000606602 SPRED2Q7Z698 418 aa28.06■■■□□ 2.08
SNX5-219ENST00000606602 ATP6V0A1Q93050 837 aa28.06■■■□□ 2.08
SNX5-219ENST00000606602 LZTS2Q9BRK4 669 aa28.06■■■□□ 2.08
SNX5-219ENST00000606602 BAZ2BQ9UIF8 2168 aaKnown RBP28.06■■■□□ 2.08
SNX5-219ENST00000606602 LGR5O75473 907 aa28.05■■■□□ 2.08
SNX5-219ENST00000606602 SMIM10L2AP0DMW4 78 aa28.05■■■□□ 2.08
SNX5-219ENST00000606602 SMIM10L2BP0DMW5 78 aa28.05■■■□□ 2.08
SNX5-219ENST00000606602 SMARCA1P28370 1054 aa28.05■■■□□ 2.08
SNX5-219ENST00000606602 MCM5P33992 734 aa28.05■■■□□ 2.08
SNX5-219ENST00000606602 SEMA3FQ13275 785 aa28.05■■■□□ 2.08
SNX5-219ENST00000606602 GRB10Q13322 594 aa28.05■■■□□ 2.08
SNX5-219ENST00000606602 METTL7BQ6UX53 244 aa28.05■■■□□ 2.08
SNX5-219ENST00000606602 TMTC2Q8N394 836 aa28.05■■■□□ 2.08
SNX5-219ENST00000606602 RAD9AQ99638 391 aa28.05■■■□□ 2.08
SNX5-219ENST00000606602 MTA3Q9BTC8 594 aa28.05■■■□□ 2.08
SNX5-219ENST00000606602 USP26Q9BXU7 913 aa28.05■■■□□ 2.08
SNX5-219ENST00000606602 MYH7BA7E2Y1 1941 aa28.04■■■□□ 2.08
SNX5-219ENST00000606602 EMSYQ7Z589 1322 aa28.04■■■□□ 2.08
SNX5-219ENST00000606602 CCDC69A6NI79 296 aa28.04■■■□□ 2.08
SNX5-219ENST00000606602 RSPH10B2B2RC85 870 aa28.04■■■□□ 2.08
SNX5-219ENST00000606602 GJB5O95377 273 aa28.04■■■□□ 2.08
SNX5-219ENST00000606602 RSPH10BP0C881 870 aa28.04■■■□□ 2.08
SNX5-219ENST00000606602 GNAQP50148 359 aa28.04■■■□□ 2.08
SNX5-219ENST00000606602 TFF2Q03403 129 aa28.04■■■□□ 2.08
SNX5-219ENST00000606602 UHRF1Q96T88 793 aaPredicted RBP28.04■■■□□ 2.08
SNX5-219ENST00000606602 LSG1Q9H089 658 aaKnown RBP28.04■■■□□ 2.08
SNX5-219ENST00000606602 REV3LO60673 3130 aa28.03■■■□□ 2.08
SNX5-219ENST00000606602 SH2B2O14492 632 aaPredicted RBP28.03■■■□□ 2.08
SNX5-219ENST00000606602 MEIS2O14770 477 aa28.03■■■□□ 2.08
SNX5-219ENST00000606602 PLEKHA8P1O95397 391 aa28.03■■■□□ 2.08
SNX5-219ENST00000606602 AAK1Q2M2I8 961 aa28.03■■■□□ 2.08
SNX5-219ENST00000606602 PCNX4Q63HM2 1172 aa28.03■■■□□ 2.08
SNX5-219ENST00000606602 FAM117BQ6P1L5 589 aa28.03■■■□□ 2.08
SNX5-219ENST00000606602 XRRA1Q6P2D8 792 aa28.03■■■□□ 2.08
SNX5-219ENST00000606602 SRBD1Q8N5C6 995 aaKnown RBP28.03■■■□□ 2.08
SNX5-219ENST00000606602 TMEM87BQ96K49 555 aa28.03■■■□□ 2.08
SNX5-219ENST00000606602 GPR20Q99678 358 aa28.03■■■□□ 2.08
SNX5-219ENST00000606602 RNPEPQ9H4A4 650 aa28.03■■■□□ 2.08
SNX5-219ENST00000606602 PIK3CDO00329 1044 aa28.02■■■□□ 2.08
SNX5-219ENST00000606602 TREHO43280 583 aa28.02■■■□□ 2.08
SNX5-219ENST00000606602 RXRAP19793 462 aa28.02■■■□□ 2.08
SNX5-219ENST00000606602 HOXC8P31273 242 aa28.02■■■□□ 2.08
SNX5-219ENST00000606602 CMTR1Q8N1G2 835 aaKnown RBP28.02■■■□□ 2.08
SNX5-219ENST00000606602 DBF4BQ8NFT6 615 aa28.02■■■□□ 2.08
SNX5-219ENST00000606602 MUC3AQ02505 3323 aa28.02■■■□□ 2.08
SNX5-219ENST00000606602 SLC27A2O14975 620 aa28.01■■■□□ 2.07
SNX5-219ENST00000606602 SP4Q02446 784 aa28.01■■■□□ 2.07
SNX5-219ENST00000606602 UTP14CQ5TAP6 766 aaKnown RBP28.01■■■□□ 2.07
SNX5-219ENST00000606602 LIN28BQ6ZN17 250 aaKnown RBP eCLIP28.01■■■□□ 2.07
SNX5-219ENST00000606602 NLRX1Q86UT6 975 aa28.01■■■□□ 2.07
SNX5-219ENST00000606602 ESYT1Q9BSJ8 1104 aa28.01■■■□□ 2.07
SNX5-219ENST00000606602 MTUS1Q9ULD2 1270 aa28.01■■■□□ 2.07
SNX5-219ENST00000606602 XIRP2A4UGR9 3374 aa28■■■□□ 2.07
SNX5-219ENST00000606602 LPXNO60711 386 aa28■■■□□ 2.07
SNX5-219ENST00000606602 CALM1P0DP23 149 aa28■■■□□ 2.07
SNX5-219ENST00000606602 CALM2P0DP24 149 aa28■■■□□ 2.07
SNX5-219ENST00000606602 CALM3P0DP25 149 aa28■■■□□ 2.07
SNX5-219ENST00000606602 GNAT1P11488 350 aa28■■■□□ 2.07
SNX5-219ENST00000606602 COL9A3Q14050 684 aaPredicted RBP28■■■□□ 2.07
SNX5-219ENST00000606602 TRIM50Q86XT4 487 aa28■■■□□ 2.07
SNX5-219ENST00000606602 SENP7Q9BQF6 1050 aa28■■■□□ 2.07
SNX5-219ENST00000606602 PSTPIP2Q9H939 334 aa28■■■□□ 2.07
SNX5-219ENST00000606602 SETD4Q9NVD3 440 aa28■■■□□ 2.07
SNX5-219ENST00000606602 ZNF215Q9UL58 517 aaPredicted RBP28■■■□□ 2.07
SNX5-219ENST00000606602 TELO2Q9Y4R8 837 aa28■■■□□ 2.07
SNX5-219ENST00000606602 AMHP03971 560 aa27.99■■■□□ 2.07
SNX5-219ENST00000606602 BMP1P13497 986 aa27.99■■■□□ 2.07
SNX5-219ENST00000606602 LIFRP42702 1097 aa27.99■■■□□ 2.07
SNX5-219ENST00000606602 CREB3L3Q68CJ9 461 aa27.99■■■□□ 2.07
SNX5-219ENST00000606602 RAB11FIP4Q86YS3 637 aa27.99■■■□□ 2.07
SNX5-219ENST00000606602 GDPD5Q8WTR4 605 aa27.99■■■□□ 2.07
SNX5-219ENST00000606602 TGS1Q96RS0 853 aaKnown RBP27.99■■■□□ 2.07
SNX5-219ENST00000606602 PRRC2BQ5JSZ5 2229 aaKnown RBP27.98■■■□□ 2.07
SNX5-219ENST00000606602 LINC01553A4QN01 128 aa27.98■■■□□ 2.07
SNX5-219ENST00000606602 CTSHP09668 335 aa27.98■■■□□ 2.07
SNX5-219ENST00000606602 KCNQ1P51787 676 aa27.98■■■□□ 2.07
SNX5-219ENST00000606602 PLEKHG4Q58EX7 1191 aa27.98■■■□□ 2.07
SNX5-219ENST00000606602 GIMAP8Q8ND71 665 aaPredicted RBP27.98■■■□□ 2.07
SNX5-219ENST00000606602 ANO2Q9NQ90 1003 aa27.98■■■□□ 2.07
SNX5-219ENST00000606602 COG5Q9UP83 839 aa27.98■■■□□ 2.07
SNX5-219ENST00000606602 SLC12A7Q9Y666 1083 aa27.98■■■□□ 2.07
SNX5-219ENST00000606602 PTPRSQ13332 1948 aa27.98■■■□□ 2.07
SNX5-219ENST00000606602 hCG_1642624A0A1W2PR95 340 aa27.97■■■□□ 2.07
SNX5-219ENST00000606602 CAND2O75155 1236 aa27.97■■■□□ 2.07
SNX5-219ENST00000606602 ERVK-21P61565 698 aa27.97■■■□□ 2.07
SNX5-219ENST00000606602 MYOCDQ8IZQ8 938 aa27.97■■■□□ 2.07
SNX5-219ENST00000606602 CCDC82Q8N4S0 544 aa27.97■■■□□ 2.07
SNX5-219ENST00000606602 NECAB3Q96P71 396 aaPredicted RBP27.97■■■□□ 2.07
SNX5-219ENST00000606602 LRRC2Q9BYS8 371 aa27.97■■■□□ 2.07
SNX5-219ENST00000606602 INSL6Q9Y581 213 aa27.97■■■□□ 2.07
SNX5-219ENST00000606602 ARHGAP4P98171 946 aa27.96■■■□□ 2.07
SNX5-219ENST00000606602 NECTIN1Q15223 517 aa27.96■■■□□ 2.07
SNX5-219ENST00000606602 SEPT8Q92599 483 aa27.96■■■□□ 2.07
SNX5-219ENST00000606602 SUGCTQ9HAC7 445 aa27.96■■■□□ 2.07
SNX5-219ENST00000606602 LMCD1Q9NZU5 365 aa27.96■■■□□ 2.07
SNX5-219ENST00000606602 MKRN4PQ13434 485 aaPredicted RBP27.95■■■□□ 2.06
SNX5-219ENST00000606602 FANCBQ8NB91 859 aa27.95■■■□□ 2.06
SNX5-219ENST00000606602 HLA-CQ95604 372 aa27.95■■■□□ 2.06
SNX5-219ENST00000606602 GPRASP2Q96D09 838 aa27.95■■■□□ 2.06
SNX5-219ENST00000606602 CDHR1Q96JP9 859 aa27.95■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms