RNA–Protein interactions for RNA: ENST00000602783.1

PPFIA3-209, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 1 (best)

Gene PPFIA3, Length 980 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-209ENST00000602783 RBAK-RBAKDNI3L0D1 243 aa24.43■■□□□ 1.5
PPFIA3-209ENST00000602783 GTPBP6O43824 516 aaPredicted RBP24.43■■□□□ 1.5
PPFIA3-209ENST00000602783 PLEKHA8P1O95397 391 aa24.43■■□□□ 1.5
PPFIA3-209ENST00000602783 LGALS2P05162 132 aa24.43■■□□□ 1.5
PPFIA3-209ENST00000602783 GNAQP50148 359 aa24.43■■□□□ 1.5
PPFIA3-209ENST00000602783 DEFB103AP81534 67 aa24.43■■□□□ 1.5
PPFIA3-209ENST00000602783 NEDD9Q14511 834 aa24.43■■□□□ 1.5
PPFIA3-209ENST00000602783 CYFIP1Q7L576 1253 aa24.43■■□□□ 1.5
PPFIA3-209ENST00000602783 CCDC136Q96JN2 1154 aa24.43■■□□□ 1.5
PPFIA3-209ENST00000602783 MTCH2Q9Y6C9 303 aa24.43■■□□□ 1.5
PPFIA3-209ENST00000602783 PRRC2BQ5JSZ5 2229 aaKnown RBP24.43■■□□□ 1.5
PPFIA3-209ENST00000602783 MEIS2O14770 477 aa24.42■■□□□ 1.5
PPFIA3-209ENST00000602783 FIBPO43427 364 aa24.42■■□□□ 1.5
PPFIA3-209ENST00000602783 POU3F3P20264 500 aaPredicted RBP24.42■■□□□ 1.5
PPFIA3-209ENST00000602783 SEMA3FQ13275 785 aa24.42■■□□□ 1.5
PPFIA3-209ENST00000602783 IKBKEQ14164 716 aa24.42■■□□□ 1.5
PPFIA3-209ENST00000602783 MBTPS1Q14703 1052 aa24.42■■□□□ 1.5
PPFIA3-209ENST00000602783 SERINC5Q86VE9 423 aa24.42■■□□□ 1.5
PPFIA3-209ENST00000602783 CMTR1Q8N1G2 835 aaKnown RBP24.42■■□□□ 1.5
PPFIA3-209ENST00000602783 SRBD1Q8N5C6 995 aaKnown RBP24.42■■□□□ 1.5
PPFIA3-209ENST00000602783 ATP6V0A1Q93050 837 aa24.42■■□□□ 1.5
PPFIA3-209ENST00000602783 USP26Q9BXU7 913 aa24.42■■□□□ 1.5
PPFIA3-209ENST00000602783 LRRC2Q9BYS8 371 aa24.42■■□□□ 1.5
PPFIA3-209ENST00000602783 SMIM10L2AP0DMW4 78 aa24.41■■□□□ 1.5
PPFIA3-209ENST00000602783 SMIM10L2BP0DMW5 78 aa24.41■■□□□ 1.5
PPFIA3-209ENST00000602783 RXRAP19793 462 aa24.41■■□□□ 1.5
PPFIA3-209ENST00000602783 THPOP40225 353 aa24.41■■□□□ 1.5
PPFIA3-209ENST00000602783 LIFRP42702 1097 aa24.41■■□□□ 1.5
PPFIA3-209ENST00000602783 SKIV2LQ15477 1246 aaKnown RBP24.41■■□□□ 1.5
PPFIA3-209ENST00000602783 RNF20Q5VTR2 975 aa24.41■■□□□ 1.5
PPFIA3-209ENST00000602783 METTL7BQ6UX53 244 aa24.41■■□□□ 1.5
PPFIA3-209ENST00000602783 RNPEPQ9H4A4 650 aa24.41■■□□□ 1.5
PPFIA3-209ENST00000602783 LCHNA4D1U4 455 aa24.4■■□□□ 1.5
PPFIA3-209ENST00000602783 RSPH10B2B2RC85 870 aa24.4■■□□□ 1.5
PPFIA3-209ENST00000602783 PIK3CDO00329 1044 aa24.4■■□□□ 1.5
PPFIA3-209ENST00000602783 EFCAB14O75071 495 aa24.4■■□□□ 1.5
PPFIA3-209ENST00000602783 RSPH10BP0C881 870 aa24.4■■□□□ 1.5
PPFIA3-209ENST00000602783 PCNX4Q63HM2 1172 aa24.4■■□□□ 1.5
PPFIA3-209ENST00000602783 KRT40Q6A162 431 aa24.4■■□□□ 1.5
PPFIA3-209ENST00000602783 SPRED2Q7Z698 418 aa24.4■■□□□ 1.5
PPFIA3-209ENST00000602783 RAB11FIP4Q86YS3 637 aa24.4■■□□□ 1.5
PPFIA3-209ENST00000602783 GPR20Q99678 358 aa24.4■■□□□ 1.5
PPFIA3-209ENST00000602783 TNFRSF10AO00220 468 aa24.39■■□□□ 1.49
PPFIA3-209ENST00000602783 TREHO43280 583 aa24.39■■□□□ 1.49
PPFIA3-209ENST00000602783 LGR5O75473 907 aa24.39■■□□□ 1.49
PPFIA3-209ENST00000602783 CALM1P0DP23 149 aa24.39■■□□□ 1.49
PPFIA3-209ENST00000602783 CALM2P0DP24 149 aa24.39■■□□□ 1.49
PPFIA3-209ENST00000602783 CALM3P0DP25 149 aa24.39■■□□□ 1.49
PPFIA3-209ENST00000602783 XRRA1Q6P2D8 792 aa24.39■■□□□ 1.49
PPFIA3-209ENST00000602783 IL27Q8NEV9 243 aa24.39■■□□□ 1.49
PPFIA3-209ENST00000602783 SLC12A7Q9Y666 1083 aa24.39■■□□□ 1.49
PPFIA3-209ENST00000602783 PTPRSQ13332 1948 aa24.39■■□□□ 1.49
PPFIA3-209ENST00000602783 GJB5O95377 273 aa24.38■■□□□ 1.49
PPFIA3-209ENST00000602783 HOXC8P31273 242 aa24.38■■□□□ 1.49
PPFIA3-209ENST00000602783 SP4Q02446 784 aa24.38■■□□□ 1.49
PPFIA3-209ENST00000602783 UTP14CQ5TAP6 766 aaKnown RBP24.38■■□□□ 1.49
PPFIA3-209ENST00000602783 FAM117BQ6P1L5 589 aa24.38■■□□□ 1.49
PPFIA3-209ENST00000602783 NLRX1Q86UT6 975 aa24.38■■□□□ 1.49
PPFIA3-209ENST00000602783 CCDC82Q8N4S0 544 aa24.38■■□□□ 1.49
PPFIA3-209ENST00000602783 DBF4BQ8NFT6 615 aa24.38■■□□□ 1.49
PPFIA3-209ENST00000602783 RAD9AQ99638 391 aa24.38■■□□□ 1.49
PPFIA3-209ENST00000602783 PSTPIP2Q9H939 334 aa24.38■■□□□ 1.49
PPFIA3-209ENST00000602783 TELO2Q9Y4R8 837 aa24.38■■□□□ 1.49
PPFIA3-209ENST00000602783 TRANK1O15050 2925 aa24.38■■□□□ 1.49
PPFIA3-209ENST00000602783 DOCK5Q9H7D0 1870 aa24.38■■□□□ 1.49
PPFIA3-209ENST00000602783 EMSYQ7Z589 1322 aa24.37■■□□□ 1.49
PPFIA3-209ENST00000602783 hCG_1642624A0A1W2PR95 340 aa24.37■■□□□ 1.49
PPFIA3-209ENST00000602783 GRB10Q13322 594 aa24.37■■□□□ 1.49
PPFIA3-209ENST00000602783 MICU3Q86XE3 530 aa24.37■■□□□ 1.49
PPFIA3-209ENST00000602783 ADAMTS19Q8TE59 1207 aa24.37■■□□□ 1.49
PPFIA3-209ENST00000602783 NEK1Q96PY6 1258 aa24.37■■□□□ 1.49
PPFIA3-209ENST00000602783 SENP7Q9BQF6 1050 aa24.37■■□□□ 1.49
PPFIA3-209ENST00000602783 SETD4Q9NVD3 440 aa24.37■■□□□ 1.49
PPFIA3-209ENST00000602783 TFF2Q03403 129 aa24.36■■□□□ 1.49
PPFIA3-209ENST00000602783 LIN28BQ6ZN17 250 aaKnown RBP eCLIP24.36■■□□□ 1.49
PPFIA3-209ENST00000602783 SGMS1Q86VZ5 419 aa24.36■■□□□ 1.49
PPFIA3-209ENST00000602783 TRIM50Q86XT4 487 aa24.36■■□□□ 1.49
PPFIA3-209ENST00000602783 RASEFQ8IZ41 740 aa24.36■■□□□ 1.49
PPFIA3-209ENST00000602783 FANCBQ8NB91 859 aa24.36■■□□□ 1.49
PPFIA3-209ENST00000602783 ZNF215Q9UL58 517 aaPredicted RBP24.36■■□□□ 1.49
PPFIA3-209ENST00000602783 REV3LO60673 3130 aa24.36■■□□□ 1.49
PPFIA3-209ENST00000602783 GNAT1P11488 350 aa24.35■■□□□ 1.49
PPFIA3-209ENST00000602783 GIMAP8Q8ND71 665 aaPredicted RBP24.35■■□□□ 1.49
PPFIA3-209ENST00000602783 TCEANC2Q96MN5 208 aa24.35■■□□□ 1.49
PPFIA3-209ENST00000602783 LPXNO60711 386 aa24.34■■□□□ 1.49
PPFIA3-209ENST00000602783 CTSHP09668 335 aa24.34■■□□□ 1.49
PPFIA3-209ENST00000602783 UBE2SQ16763 222 aa24.34■■□□□ 1.49
PPFIA3-209ENST00000602783 ADCK5Q3MIX3 580 aa24.34■■□□□ 1.49
PPFIA3-209ENST00000602783 PLEKHG4Q58EX7 1191 aa24.34■■□□□ 1.49
PPFIA3-209ENST00000602783 TMTC3Q6ZXV5 915 aa24.34■■□□□ 1.49
PPFIA3-209ENST00000602783 GPRASP2Q96D09 838 aa24.34■■□□□ 1.49
PPFIA3-209ENST00000602783 UHRF1Q96T88 793 aaPredicted RBP24.34■■□□□ 1.49
PPFIA3-209ENST00000602783 MTUS1Q9ULD2 1270 aa24.34■■□□□ 1.49
PPFIA3-209ENST00000602783 NCOR1O75376 2440 aa24.33■■□□□ 1.49
PPFIA3-209ENST00000602783 LINC01553A4QN01 128 aa24.33■■□□□ 1.49
PPFIA3-209ENST00000602783 ATP9AO75110 1047 aa24.33■■□□□ 1.49
PPFIA3-209ENST00000602783 AMHP03971 560 aa24.33■■□□□ 1.49
PPFIA3-209ENST00000602783 AAK1Q2M2I8 961 aa24.33■■□□□ 1.49
PPFIA3-209ENST00000602783 SYNE3Q6ZMZ3 975 aa24.33■■□□□ 1.49
PPFIA3-209ENST00000602783 MYOCDQ8IZQ8 938 aa24.33■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms