RNA–Protein interactions for RNA: ENST00000602190.1

IRF3-231, Transcript of interferon regulatory factor 3, human

TSL 3

Gene IRF3, Length 413 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
IRF3-231	ENST00000602190	SLC35G1	Q2M3R5	365 aa		21.3	■■□□□ 1
IRF3-231	ENST00000602190	TCEAL5	Q5H9L2	206 aa		21.3	■■□□□ 1
IRF3-231	ENST00000602190	FAM26D	Q5JW98	314 aa		21.3	■■□□□ 1
IRF3-231	ENST00000602190	ALYREF	Q86V81	257 aa	Known RBP	21.3	■■□□□ 1
IRF3-231	ENST00000602190	TMEM192	Q8IY95	271 aa		21.3	■■□□□ 1
IRF3-231	ENST00000602190	TTC3	P53804	2025 aa		21.29	■■□□□ 1
IRF3-231	ENST00000602190	TECTA	O75443	2155 aa		21.29	■■□□□ 1
IRF3-231	ENST00000602190	C17orf102	A2RUQ5	167 aa		21.29	■■□□□ 1
IRF3-231	ENST00000602190		B4E1Z4	1266 aa		21.29	■■□□□ 1
IRF3-231	ENST00000602190		H3BQ06	376 aa	Predicted RBP	21.29	■■□□□ 1
IRF3-231	ENST00000602190		H3BRB1	525 aa		21.29	■■□□□ 1
IRF3-231	ENST00000602190	TREH	O43280	583 aa		21.29	■■□□□ 1
IRF3-231	ENST00000602190	SDS	P20132	328 aa		21.29	■■□□□ 1
IRF3-231	ENST00000602190	MFAP1	P55081	439 aa	Known RBP	21.29	■■□□□ 1
IRF3-231	ENST00000602190	GPM6B	Q13491	265 aa		21.29	■■□□□ 1
IRF3-231	ENST00000602190	SEC23A	Q15436	765 aa		21.29	■■□□□ 1
IRF3-231	ENST00000602190	STAG2	Q8N3U4	1231 aa		21.29	■■□□□ 1
IRF3-231	ENST00000602190	GPKOW	Q92917	476 aa	Predicted RBP eCLIP	21.29	■■□□□ 1
IRF3-231	ENST00000602190	CRBN	Q96SW2	442 aa		21.29	■■□□□ 1
IRF3-231	ENST00000602190	RNPEP	Q9H4A4	650 aa		21.29	■■□□□ 1
IRF3-231	ENST00000602190	NSUN3	Q9H649	340 aa	Known RBP	21.29	■■□□□ 1
IRF3-231	ENST00000602190	TUT1	Q9H6E5	874 aa	Known RBP	21.29	■■□□□ 1
IRF3-231	ENST00000602190	LGALS2	P05162	132 aa		21.28	■■□□□ 1
IRF3-231	ENST00000602190	SMIM10L2A	P0DMW4	78 aa		21.28	■■□□□ 1
IRF3-231	ENST00000602190	SMIM10L2B	P0DMW5	78 aa		21.28	■■□□□ 1
IRF3-231	ENST00000602190	SSTR3	P32745	418 aa	Predicted RBP	21.28	■■□□□ 1
IRF3-231	ENST00000602190	ICAM3	P32942	547 aa		21.28	■■□□□ 1
IRF3-231	ENST00000602190	NHLH1	Q02575	133 aa		21.28	■■□□□ 1
IRF3-231	ENST00000602190	ADHFE1	Q8IWW8	467 aa		21.28	■■□□□ 1
IRF3-231	ENST00000602190	SEPT8	Q92599	483 aa		21.28	■■□□□ 1
IRF3-231	ENST00000602190	ATP6V0A1	Q93050	837 aa		21.28	■■□□□ 1
IRF3-231	ENST00000602190	OSBPL3	Q9H4L5	887 aa		21.28	■■□□□ 1
IRF3-231	ENST00000602190	PALM3	A6NDB9	673 aa	Predicted RBP	21.27	■■□□□ 1
IRF3-231	ENST00000602190	ZBTB5	O15062	677 aa		21.27	■■□□□ 1
IRF3-231	ENST00000602190	RPAIN	Q86UA6	219 aa		21.27	■■□□□ 1
IRF3-231	ENST00000602190	APBB2	Q92870	758 aa		21.27	■■□□□ 1
IRF3-231	ENST00000602190	INPP4A	Q96PE3	977 aa	Predicted RBP	21.27	■■□□□ 1
IRF3-231	ENST00000602190	DSCC1	Q9BVC3	393 aa		21.27	■■□□□ 1
IRF3-231	ENST00000602190	BCAS3	Q9H6U6	928 aa		21.27	■■□□□ 1
IRF3-231	ENST00000602190	MAD2L2	Q9UI95	211 aa		21.27	■■□□□ 1
IRF3-231	ENST00000602190	BAZ2B	Q9UIF8	2168 aa	Known RBP	21.27	■■□□□ 1
IRF3-231	ENST00000602190	NCK2	O43639	380 aa		21.26	■□□□□ 0.99
IRF3-231	ENST00000602190	SEMA3F	Q13275	785 aa		21.26	■□□□□ 0.99
IRF3-231	ENST00000602190	CLP1	Q92989	425 aa	Known RBP	21.26	■□□□□ 0.99
IRF3-231	ENST00000602190	YME1L1	Q96TA2	773 aa		21.26	■□□□□ 0.99
IRF3-231	ENST00000602190	LMAN2L	Q9H0V9	348 aa		21.26	■□□□□ 0.99
IRF3-231	ENST00000602190	RIOX1	Q9H6W3	641 aa		21.26	■□□□□ 0.99
IRF3-231	ENST00000602190	FAM50B	Q9Y247	325 aa		21.26	■□□□□ 0.99
IRF3-231	ENST00000602190	KAT6A	Q92794	2004 aa		21.26	■□□□□ 0.99
IRF3-231	ENST00000602190	KIAA1671	Q9BY89	1806 aa		21.25	■□□□□ 0.99
IRF3-231	ENST00000602190	RB1	P06400	928 aa		21.25	■□□□□ 0.99
IRF3-231	ENST00000602190	MYCL	P12524	364 aa	Predicted RBP	21.25	■□□□□ 0.99
IRF3-231	ENST00000602190	MRE11	P49959	708 aa		21.25	■□□□□ 0.99
IRF3-231	ENST00000602190	MRPS9	P82933	396 aa	Known RBP	21.25	■□□□□ 0.99
IRF3-231	ENST00000602190	SMAD2	Q15796	467 aa	Known RBP	21.25	■□□□□ 0.99
IRF3-231	ENST00000602190	FBXL18	Q96ME1	805 aa		21.25	■□□□□ 0.99
IRF3-231	ENST00000602190	USP26	Q9BXU7	913 aa		21.25	■□□□□ 0.99
IRF3-231	ENST00000602190	EHMT1	Q9H9B1	1298 aa		21.25	■□□□□ 0.99
IRF3-231	ENST00000602190	VAT1L	Q9HCJ6	419 aa		21.25	■□□□□ 0.99
IRF3-231	ENST00000602190	PCDHA1	Q9Y5I3	950 aa		21.25	■□□□□ 0.99
IRF3-231	ENST00000602190	KLRF2	D3W0D1	207 aa		21.24	■□□□□ 0.99
IRF3-231	ENST00000602190	CCND2	P30279	289 aa		21.24	■□□□□ 0.99
IRF3-231	ENST00000602190	HOXA13	P31271	388 aa	Predicted RBP	21.24	■□□□□ 0.99
IRF3-231	ENST00000602190	IRS1	P35568	1242 aa		21.24	■□□□□ 0.99
IRF3-231	ENST00000602190	METTL7B	Q6UX53	244 aa		21.24	■□□□□ 0.99
IRF3-231	ENST00000602190	GPR20	Q99678	358 aa		21.24	■□□□□ 0.99
IRF3-231	ENST00000602190	STAM2	O75886	525 aa		21.23	■□□□□ 0.99
IRF3-231	ENST00000602190	HERC4	Q5GLZ8	1057 aa	Predicted RBP	21.23	■□□□□ 0.99
IRF3-231	ENST00000602190	SMC5	Q8IY18	1101 aa		21.23	■□□□□ 0.99
IRF3-231	ENST00000602190	ZNF689	Q96CS4	500 aa	Predicted RBP	21.23	■□□□□ 0.99
IRF3-231	ENST00000602190	IFIH1	Q9BYX4	1025 aa	Known RBP	21.23	■□□□□ 0.99
IRF3-231	ENST00000602190	KRT23	Q9C075	422 aa		21.23	■□□□□ 0.99
IRF3-231	ENST00000602190	MLXIP	Q9HAP2	919 aa		21.23	■□□□□ 0.99
IRF3-231	ENST00000602190	SPATA31C2	B4DYI2	1134 aa		21.22	■□□□□ 0.99
IRF3-231	ENST00000602190	MBTPS2	O43462	519 aa		21.22	■□□□□ 0.99
IRF3-231	ENST00000602190	CYTH3	O43739	400 aa		21.22	■□□□□ 0.99
IRF3-231	ENST00000602190	DHX16	O60231	1041 aa	Known RBP	21.22	■□□□□ 0.99
IRF3-231	ENST00000602190	BMPR1A	P36894	532 aa		21.22	■□□□□ 0.99
IRF3-231	ENST00000602190	DLX2	Q07687	328 aa	Predicted RBP	21.22	■□□□□ 0.99
IRF3-231	ENST00000602190	MGAT3	Q09327	533 aa		21.22	■□□□□ 0.99
IRF3-231	ENST00000602190	HYAL1	Q12794	435 aa		21.22	■□□□□ 0.99
IRF3-231	ENST00000602190	HFE2	Q6ZVN8	426 aa		21.22	■□□□□ 0.99
IRF3-231	ENST00000602190	CRIPAK	Q8N1N5	446 aa		21.22	■□□□□ 0.99
IRF3-231	ENST00000602190	LMBR1	Q8WVP7	490 aa		21.22	■□□□□ 0.99
IRF3-231	ENST00000602190	CNNM2	Q9H8M5	875 aa		21.22	■□□□□ 0.99
IRF3-231	ENST00000602190	ZBTB47	Q9UFB7	747 aa	Predicted RBP	21.22	■□□□□ 0.99
IRF3-231	ENST00000602190	TRIM6-TRIM34	B2RNG4	842 aa		21.21	■□□□□ 0.99
IRF3-231	ENST00000602190	GCOM1	H8Y6P7	765 aa	Predicted RBP	21.21	■□□□□ 0.99
IRF3-231	ENST00000602190	SORBS3	O60504	671 aa		21.21	■□□□□ 0.99
IRF3-231	ENST00000602190	CHRNA1	P02708	482 aa		21.21	■□□□□ 0.99
IRF3-231	ENST00000602190	CTSH	P09668	335 aa		21.21	■□□□□ 0.99
IRF3-231	ENST00000602190	POLR2M	P0CAP2	368 aa		21.21	■□□□□ 0.99
IRF3-231	ENST00000602190	GNAT1	P11488	350 aa		21.21	■□□□□ 0.99
IRF3-231	ENST00000602190	CAMK1	Q14012	370 aa		21.21	■□□□□ 0.99
IRF3-231	ENST00000602190	IFIT1B	Q5T764	474 aa	Known RBP	21.21	■□□□□ 0.99
IRF3-231	ENST00000602190	PLEKHM2	Q8IWE5	1019 aa		21.21	■□□□□ 0.99
IRF3-231	ENST00000602190	IL17RA	Q96F46	866 aa		21.21	■□□□□ 0.99
IRF3-231	ENST00000602190	SENP7	Q9BQF6	1050 aa		21.21	■□□□□ 0.99
IRF3-231	ENST00000602190	C11orf84	Q9BUA3	381 aa	Predicted RBP	21.21	■□□□□ 0.99
IRF3-231	ENST00000602190	SETD4	Q9NVD3	440 aa		21.21	■□□□□ 0.99

Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms