RNA–Protein interactions for RNA: ENST00000600659.2

RPS28-203, Transcript of ribosomal protein S28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPS28, Length 1,326 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-203ENST00000600659 FAM86B1E9PN63 330 aa17.99■□□□□ 0.47
RPS28-203ENST00000600659 FAM86B2P0C5J1 330 aa17.99■□□□□ 0.47
RPS28-203ENST00000600659 ARP10275 920 aa17.99■□□□□ 0.47
RPS28-203ENST00000600659 GNA11P29992 359 aa17.99■□□□□ 0.47
RPS28-203ENST00000600659 MTMR1Q13613 665 aa17.99■□□□□ 0.47
RPS28-203ENST00000600659 NEDD9Q14511 834 aa17.99■□□□□ 0.47
RPS28-203ENST00000600659 NFRKBQ6P4R8 1299 aa17.99■□□□□ 0.47
RPS28-203ENST00000600659 CPLX2Q6PUV4 134 aaKnown RBP17.99■□□□□ 0.47
RPS28-203ENST00000600659 SESTD1Q86VW0 696 aa17.99■□□□□ 0.47
RPS28-203ENST00000600659 BADQ92934 168 aa17.99■□□□□ 0.47
RPS28-203ENST00000600659 EHMT1Q9H9B1 1298 aa17.99■□□□□ 0.47
RPS28-203ENST00000600659 TMEM39AQ9NV64 488 aa17.99■□□□□ 0.47
RPS28-203ENST00000600659 UMODL1Q5DID0 1318 aa17.99■□□□□ 0.47
RPS28-203ENST00000600659 MEIS1O00470 390 aa17.98■□□□□ 0.47
RPS28-203ENST00000600659 PPFIA4O75335 1185 aa17.98■□□□□ 0.47
RPS28-203ENST00000600659 CDKL5O76039 1030 aa17.98■□□□□ 0.47
RPS28-203ENST00000600659 ITGB3BPQ13352 177 aaPredicted RBP17.98■□□□□ 0.47
RPS28-203ENST00000600659 HIC1Q14526 733 aa17.98■□□□□ 0.47
RPS28-203ENST00000600659 CEP55Q53EZ4 464 aa17.98■□□□□ 0.47
RPS28-203ENST00000600659 CDHR1Q96JP9 859 aa17.98■□□□□ 0.47
RPS28-203ENST00000600659 PHF20Q9BVI0 1012 aa17.98■□□□□ 0.47
RPS28-203ENST00000600659 MLXIPQ9HAP2 919 aa17.98■□□□□ 0.47
RPS28-203ENST00000600659 KCNH7Q9NS40 1196 aa17.98■□□□□ 0.47
RPS28-203ENST00000600659 TRMT13Q9NUP7 481 aaKnown RBP17.98■□□□□ 0.47
RPS28-203ENST00000600659 PRKAG2Q9UGJ0 569 aa17.98■□□□□ 0.47
RPS28-203ENST00000600659 PCDHA4Q9UN74 947 aa17.98■□□□□ 0.47
RPS28-203ENST00000600659 LAMA2P24043 3122 aaKnown RBP17.98■□□□□ 0.47
RPS28-203ENST00000600659 JAK2O60674 1132 aa17.98■□□□□ 0.47
RPS28-203ENST00000600659 LGALS2P05162 132 aa17.98■□□□□ 0.47
RPS28-203ENST00000600659 PSEN2P49810 448 aa17.98■□□□□ 0.47
RPS28-203ENST00000600659 EPHB4P54760 987 aa17.98■□□□□ 0.47
RPS28-203ENST00000600659 NLRP5P59047 1200 aa17.98■□□□□ 0.47
RPS28-203ENST00000600659 FAM177A1Q8N128 213 aaPredicted RBP17.98■□□□□ 0.47
RPS28-203ENST00000600659 LENG9Q96B70 501 aa17.98■□□□□ 0.47
RPS28-203ENST00000600659 TBC1D32Q96NH3 1257 aa17.98■□□□□ 0.47
RPS28-203ENST00000600659 NOC4LQ9BVI4 516 aaKnown RBP17.98■□□□□ 0.47
RPS28-203ENST00000600659 ORC3Q9UBD5 711 aaPredicted RBP17.98■□□□□ 0.47
RPS28-203ENST00000600659 KCNJ14Q9UNX9 436 aa17.98■□□□□ 0.47
RPS28-203ENST00000600659 TET1Q8NFU7 2136 aa17.97■□□□□ 0.47
RPS28-203ENST00000600659 A0A1W2PPC1 479 aa17.97■□□□□ 0.47
RPS28-203ENST00000600659 MAFGO15525 162 aa17.97■□□□□ 0.47
RPS28-203ENST00000600659 TIMP1P01033 207 aa17.97■□□□□ 0.47
RPS28-203ENST00000600659 CIITAP33076 1130 aa17.97■□□□□ 0.47
RPS28-203ENST00000600659 PTPN11Q06124 597 aaPredicted RBP17.97■□□□□ 0.47
RPS28-203ENST00000600659 MFSD10Q14728 455 aa17.97■□□□□ 0.47
RPS28-203ENST00000600659 MCTP2Q6DN12 878 aa17.97■□□□□ 0.47
RPS28-203ENST00000600659 GDF6Q6KF10 455 aaPredicted RBP17.97■□□□□ 0.47
RPS28-203ENST00000600659 NIPA1Q7RTP0 329 aa17.97■□□□□ 0.47
RPS28-203ENST00000600659 TRIM50Q86XT4 487 aa17.97■□□□□ 0.47
RPS28-203ENST00000600659 BICD2Q8TD16 824 aa17.97■□□□□ 0.47
RPS28-203ENST00000600659 VWCEQ96DN2 955 aa17.97■□□□□ 0.47
RPS28-203ENST00000600659 AGO4Q9HCK5 861 aaKnown RBP17.97■□□□□ 0.47
RPS28-203ENST00000600659 PKD2L1Q9P0L9 805 aa17.97■□□□□ 0.47
RPS28-203ENST00000600659 LIMCH1Q9UPQ0 1083 aa17.97■□□□□ 0.47
RPS28-203ENST00000600659 KAT6AQ92794 2004 aa17.96■□□□□ 0.47
RPS28-203ENST00000600659 NFASCO94856 1347 aa17.96■□□□□ 0.47
RPS28-203ENST00000600659 GSTTP1A0A1W2PQM5 241 aa17.96■□□□□ 0.46
RPS28-203ENST00000600659 TLR3O15455 904 aaKnown RBP17.96■□□□□ 0.46
RPS28-203ENST00000600659 CD2BP2O95400 341 aaKnown RBP17.96■□□□□ 0.46
RPS28-203ENST00000600659 RAG1P15918 1043 aa17.96■□□□□ 0.46
RPS28-203ENST00000600659 HOXC8P31273 242 aa17.96■□□□□ 0.46
RPS28-203ENST00000600659 KIAA0753Q2KHM9 967 aa17.96■□□□□ 0.46
RPS28-203ENST00000600659 BLIDQ8IZY5 108 aa17.96■□□□□ 0.46
RPS28-203ENST00000600659 UBE2OQ9C0C9 1292 aaKnown RBP17.96■□□□□ 0.46
RPS28-203ENST00000600659 WNT8AQ9H1J5 351 aa17.96■□□□□ 0.46
RPS28-203ENST00000600659 HDAC6Q9UBN7 1215 aa17.96■□□□□ 0.46
RPS28-203ENST00000600659 GTF2IRD1Q9UHL9 959 aa17.96■□□□□ 0.46
RPS28-203ENST00000600659 DHX15O43143 795 aaKnown RBP17.95■□□□□ 0.46
RPS28-203ENST00000600659 CYP2C9P11712 490 aa17.95■□□□□ 0.46
RPS28-203ENST00000600659 CYP2C18P33260 490 aa17.95■□□□□ 0.46
RPS28-203ENST00000600659 FXR1P51114 621 aaKnown RBP eCLIP17.95■□□□□ 0.46
RPS28-203ENST00000600659 SP4Q02446 784 aa17.95■□□□□ 0.46
RPS28-203ENST00000600659 FAM47CQ5HY64 1035 aa17.95■□□□□ 0.46
RPS28-203ENST00000600659 GIMAP8Q8ND71 665 aaPredicted RBP17.95■□□□□ 0.46
RPS28-203ENST00000600659 DHX38Q92620 1227 aaKnown RBP17.95■□□□□ 0.46
RPS28-203ENST00000600659 PCYT2Q99447 389 aa17.95■□□□□ 0.46
RPS28-203ENST00000600659 LBHD1Q9BQE6 289 aaPredicted RBP17.95■□□□□ 0.46
RPS28-203ENST00000600659 KATNAL1Q9BW62 490 aa17.95■□□□□ 0.46
RPS28-203ENST00000600659 PPP1R12CQ9BZL4 782 aa17.95■□□□□ 0.46
RPS28-203ENST00000600659 NOP56O00567 594 aaKnown RBP17.94■□□□□ 0.46
RPS28-203ENST00000600659 TCF7P36402 384 aaPredicted RBP17.94■□□□□ 0.46
RPS28-203ENST00000600659 RABEP1Q15276 862 aa17.94■□□□□ 0.46
RPS28-203ENST00000600659 C9orf50Q5SZB4 431 aa17.94■□□□□ 0.46
RPS28-203ENST00000600659 GALNT17Q6IS24 598 aa17.94■□□□□ 0.46
RPS28-203ENST00000600659 MFSD5Q6N075 450 aa17.94■□□□□ 0.46
RPS28-203ENST00000600659 PLA2G4DQ86XP0 818 aa17.94■□□□□ 0.46
RPS28-203ENST00000600659 CCDC83Q8IWF9 413 aa17.94■□□□□ 0.46
RPS28-203ENST00000600659 TDHQ8IZJ6 230 aa17.94■□□□□ 0.46
RPS28-203ENST00000600659 OXER1Q8TDS5 423 aa17.94■□□□□ 0.46
RPS28-203ENST00000600659 TBCKQ8TEA7 893 aa17.94■□□□□ 0.46
RPS28-203ENST00000600659 TNFRSF25Q93038 417 aa17.94■□□□□ 0.46
RPS28-203ENST00000600659 WNT8BQ93098 351 aa17.94■□□□□ 0.46
RPS28-203ENST00000600659 ALG1Q9BT22 464 aa17.94■□□□□ 0.46
RPS28-203ENST00000600659 BACH2Q9BYV9 841 aa17.94■□□□□ 0.46
RPS28-203ENST00000600659 HIPK3Q9H422 1215 aa17.94■□□□□ 0.46
RPS28-203ENST00000600659 MYH9P35579 1960 aaKnown RBP17.93■□□□□ 0.46
RPS28-203ENST00000600659 SIP14410 1827 aa17.93■□□□□ 0.46
RPS28-203ENST00000600659 H3BRB1 525 aa17.93■□□□□ 0.46
RPS28-203ENST00000600659 RBAK-RBAKDNI3L0D1 243 aa17.93■□□□□ 0.46
RPS28-203ENST00000600659 SOX1O00570 391 aaPredicted RBP17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms