RNA–Protein interactions for RNA: ENST00000596379.1

LINC02560-201, Transcript of long intergenic non-protein coding RNA 2560, humanhuman

BASIC

Gene LINC02560, Length 459 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02560-201ENST00000596379 LINC01553A4QN01 128 aa18.41■□□□□ 0.54
LINC02560-201ENST00000596379 LGALS2P05162 132 aa18.41■□□□□ 0.54
LINC02560-201ENST00000596379 ERVK-21P61565 698 aa18.41■□□□□ 0.54
LINC02560-201ENST00000596379 GNPTABQ3T906 1256 aa18.41■□□□□ 0.54
LINC02560-201ENST00000596379 IGDCC4Q8TDY8 1250 aa18.41■□□□□ 0.54
LINC02560-201ENST00000596379 TGS1Q96RS0 853 aaKnown RBP18.41■□□□□ 0.54
LINC02560-201ENST00000596379 RNPEPQ9H4A4 650 aa18.41■□□□□ 0.54
LINC02560-201ENST00000596379 LMCD1Q9NZU5 365 aa18.41■□□□□ 0.54
LINC02560-201ENST00000596379 EMSYQ7Z589 1322 aa18.41■□□□□ 0.54
LINC02560-201ENST00000596379 SPATA31C2B4DYI2 1134 aa18.4■□□□□ 0.54
LINC02560-201ENST00000596379 NOP56O00567 594 aaKnown RBP18.4■□□□□ 0.54
LINC02560-201ENST00000596379 TREHO43280 583 aa18.4■□□□□ 0.54
LINC02560-201ENST00000596379 SMIM10L2AP0DMW4 78 aa18.4■□□□□ 0.54
LINC02560-201ENST00000596379 SMIM10L2BP0DMW5 78 aa18.4■□□□□ 0.54
LINC02560-201ENST00000596379 ICAM3P32942 547 aa18.4■□□□□ 0.54
LINC02560-201ENST00000596379 ANTXR2P58335 489 aa18.4■□□□□ 0.54
LINC02560-201ENST00000596379 NEDD9Q14511 834 aa18.4■□□□□ 0.54
LINC02560-201ENST00000596379 CYFIP1Q7L576 1253 aa18.4■□□□□ 0.54
LINC02560-201ENST00000596379 USP26Q9BXU7 913 aa18.4■□□□□ 0.54
LINC02560-201ENST00000596379 RAPGEFL1Q9UHV5 662 aa18.4■□□□□ 0.54
LINC02560-201ENST00000596379 SUPT16HQ9Y5B9 1047 aaKnown RBP18.4■□□□□ 0.54
LINC02560-201ENST00000596379 MICAL3Q7RTP6 2002 aa18.39■□□□□ 0.53
LINC02560-201ENST00000596379 XIRP2A4UGR9 3374 aa18.39■□□□□ 0.53
LINC02560-201ENST00000596379 SGSM2O43147 1006 aa18.39■□□□□ 0.53
LINC02560-201ENST00000596379 STAM2O75886 525 aa18.39■□□□□ 0.53
LINC02560-201ENST00000596379 HOXC8P31273 242 aa18.39■□□□□ 0.53
LINC02560-201ENST00000596379 SEMA3FQ13275 785 aa18.39■□□□□ 0.53
LINC02560-201ENST00000596379 MB21D2Q8IYB1 491 aaPredicted RBP18.39■□□□□ 0.53
LINC02560-201ENST00000596379 SMARCC2Q8TAQ2 1214 aa18.39■□□□□ 0.53
LINC02560-201ENST00000596379 INPP4AQ96PE3 977 aaPredicted RBP18.39■□□□□ 0.53
LINC02560-201ENST00000596379 INSL6Q9Y581 213 aa18.39■□□□□ 0.53
LINC02560-201ENST00000596379 FRMPD4Q14CM0 1322 aa18.39■□□□□ 0.53
LINC02560-201ENST00000596379 SIP14410 1827 aa18.38■□□□□ 0.53
LINC02560-201ENST00000596379 AMHP03971 560 aa18.38■□□□□ 0.53
LINC02560-201ENST00000596379 MKRN4PQ13434 485 aaPredicted RBP18.38■□□□□ 0.53
LINC02560-201ENST00000596379 PLEKHG4Q58EX7 1191 aa18.38■□□□□ 0.53
LINC02560-201ENST00000596379 USP17L6PQ6QN14 398 aa18.38■□□□□ 0.53
LINC02560-201ENST00000596379 METTL7BQ6UX53 244 aa18.38■□□□□ 0.53
LINC02560-201ENST00000596379 MYOCDQ8IZQ8 938 aa18.38■□□□□ 0.53
LINC02560-201ENST00000596379 MAP4K1Q92918 833 aa18.38■□□□□ 0.53
LINC02560-201ENST00000596379 GPR20Q99678 358 aa18.38■□□□□ 0.53
LINC02560-201ENST00000596379 MYL10Q9BUA6 226 aa18.38■□□□□ 0.53
LINC02560-201ENST00000596379 OSBPL7Q9BZF2 842 aa18.38■□□□□ 0.53
LINC02560-201ENST00000596379 SETD4Q9NVD3 440 aa18.38■□□□□ 0.53
LINC02560-201ENST00000596379 TELO2Q9Y4R8 837 aa18.38■□□□□ 0.53
LINC02560-201ENST00000596379 BRWD1Q9NSI6 2320 aa18.38■□□□□ 0.53
LINC02560-201ENST00000596379 KAT6AQ92794 2004 aa18.37■□□□□ 0.53
LINC02560-201ENST00000596379 FIBPO43427 364 aa18.37■□□□□ 0.53
LINC02560-201ENST00000596379 UTP14CQ5TAP6 766 aaKnown RBP18.37■□□□□ 0.53
LINC02560-201ENST00000596379 ZNF654Q8IZM8 581 aa18.37■□□□□ 0.53
LINC02560-201ENST00000596379 CTCFLQ8NI51 663 aaPredicted RBP18.37■□□□□ 0.53
LINC02560-201ENST00000596379 CUL5Q93034 780 aa18.37■□□□□ 0.53
LINC02560-201ENST00000596379 RRP36Q96EU6 259 aaKnown RBP18.37■□□□□ 0.53
LINC02560-201ENST00000596379 C17orf80Q9BSJ5 609 aa18.37■□□□□ 0.53
LINC02560-201ENST00000596379 LY9Q9HBG7 655 aa18.37■□□□□ 0.53
LINC02560-201ENST00000596379 RBM8AQ9Y5S9 174 aaKnown RBP18.37■□□□□ 0.53
LINC02560-201ENST00000596379 CTSHP09668 335 aa18.36■□□□□ 0.53
LINC02560-201ENST00000596379 GNAT1P11488 350 aa18.36■□□□□ 0.53
LINC02560-201ENST00000596379 KIF5BP33176 963 aa18.36■□□□□ 0.53
LINC02560-201ENST00000596379 HTRA4P83105 476 aaPredicted RBP18.36■□□□□ 0.53
LINC02560-201ENST00000596379 SEPT8Q92599 483 aa18.36■□□□□ 0.53
LINC02560-201ENST00000596379 MAP3K14Q99558 947 aa18.36■□□□□ 0.53
LINC02560-201ENST00000596379 SPZ1Q9BXG8 430 aa18.36■□□□□ 0.53
LINC02560-201ENST00000596379 MEIS2O14770 477 aa18.35■□□□□ 0.53
LINC02560-201ENST00000596379 DDAH1O94760 285 aa18.35■□□□□ 0.53
LINC02560-201ENST00000596379 SMARCA1P28370 1054 aa18.35■□□□□ 0.53
LINC02560-201ENST00000596379 SP4Q02446 784 aa18.35■□□□□ 0.53
LINC02560-201ENST00000596379 PCNX4Q63HM2 1172 aa18.35■□□□□ 0.53
LINC02560-201ENST00000596379 CASC1Q6TDU7 716 aa18.35■□□□□ 0.53
LINC02560-201ENST00000596379 TRIM50Q86XT4 487 aa18.35■□□□□ 0.53
LINC02560-201ENST00000596379 FBXO22Q8NEZ5 403 aa18.35■□□□□ 0.53
LINC02560-201ENST00000596379 SENP7Q9BQF6 1050 aa18.35■□□□□ 0.53
LINC02560-201ENST00000596379 C1QTNF1Q9BXJ1 281 aa18.35■□□□□ 0.53
LINC02560-201ENST00000596379 SEC63Q9UGP8 760 aaKnown RBP18.35■□□□□ 0.53
LINC02560-201ENST00000596379 PIK3CDO00329 1044 aa18.34■□□□□ 0.53
LINC02560-201ENST00000596379 CAND2O75155 1236 aa18.34■□□□□ 0.53
LINC02560-201ENST00000596379 UPP2O95045 317 aa18.34■□□□□ 0.53
LINC02560-201ENST00000596379 XRRA1Q6P2D8 792 aa18.34■□□□□ 0.53
LINC02560-201ENST00000596379 NLRX1Q86UT6 975 aa18.34■□□□□ 0.53
LINC02560-201ENST00000596379 CMTR1Q8N1G2 835 aaKnown RBP18.34■□□□□ 0.53
LINC02560-201ENST00000596379 SP7Q8TDD2 431 aaPredicted RBP18.34■□□□□ 0.53
LINC02560-201ENST00000596379 TOP1MTQ969P6 601 aa18.34■□□□□ 0.53
LINC02560-201ENST00000596379 LZTS2Q9BRK4 669 aa18.34■□□□□ 0.53
LINC02560-201ENST00000596379 EPHX3Q9H6B9 360 aa18.34■□□□□ 0.53
LINC02560-201ENST00000596379 ZNF215Q9UL58 517 aaPredicted RBP18.34■□□□□ 0.53
LINC02560-201ENST00000596379 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP18.33■□□□□ 0.52
LINC02560-201ENST00000596379 LOC101059915A0A1B0GWI6 518 aaPredicted RBP18.33■□□□□ 0.52
LINC02560-201ENST00000596379 PRC1O43663 620 aa18.33■□□□□ 0.52
LINC02560-201ENST00000596379 PLEKHA8P1O95397 391 aa18.33■□□□□ 0.52
LINC02560-201ENST00000596379 GNAQP50148 359 aa18.33■□□□□ 0.52
LINC02560-201ENST00000596379 IRX6P78412 446 aaPredicted RBP18.33■□□□□ 0.52
LINC02560-201ENST00000596379 ADAM17P78536 824 aa18.33■□□□□ 0.52
LINC02560-201ENST00000596379 ARHGAP4P98171 946 aa18.33■□□□□ 0.52
LINC02560-201ENST00000596379 NFXL1Q6ZNB6 911 aa18.33■□□□□ 0.52
LINC02560-201ENST00000596379 SRBD1Q8N5C6 995 aaKnown RBP18.33■□□□□ 0.52
LINC02560-201ENST00000596379 LMBR1Q8WVP7 490 aa18.33■□□□□ 0.52
LINC02560-201ENST00000596379 CCDC69A6NI79 296 aa18.32■□□□□ 0.52
LINC02560-201ENST00000596379 ATP9AO75110 1047 aa18.32■□□□□ 0.52
LINC02560-201ENST00000596379 RXRAP19793 462 aa18.32■□□□□ 0.52
LINC02560-201ENST00000596379 MCM5P33992 734 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms