RNA–Protein interactions for RNA: ENST00000593254.1

H3F3B-213, Transcript of H3 histone family member 3B, humanhuman

TSL 5

Gene H3F3B, Length 894 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-213ENST00000593254 DOCK5Q9H7D0 1870 aa15.23■□□□□ 0.03
H3F3B-213ENST00000593254 RXRAP19793 462 aa15.23■□□□□ 0.03
H3F3B-213ENST00000593254 CCND2P30279 289 aa15.23■□□□□ 0.03
H3F3B-213ENST00000593254 WDR5P61964 334 aaKnown RBP15.23■□□□□ 0.03
H3F3B-213ENST00000593254 BFSP2Q13515 415 aa15.23■□□□□ 0.03
H3F3B-213ENST00000593254 GPNMBQ14956 572 aa15.23■□□□□ 0.03
H3F3B-213ENST00000593254 TSGA10IPQ3SY00 556 aa15.23■□□□□ 0.03
H3F3B-213ENST00000593254 LEXMQ3ZCV2 418 aa15.23■□□□□ 0.03
H3F3B-213ENST00000593254 FAM47CQ5HY64 1035 aa15.23■□□□□ 0.03
H3F3B-213ENST00000593254 KCNV1Q6PIU1 500 aa15.23■□□□□ 0.03
H3F3B-213ENST00000593254 FCHSD1Q86WN1 690 aa15.23■□□□□ 0.03
H3F3B-213ENST00000593254 GJD3Q8N144 294 aa15.23■□□□□ 0.03
H3F3B-213ENST00000593254 SRBD1Q8N5C6 995 aaKnown RBP15.23■□□□□ 0.03
H3F3B-213ENST00000593254 KAT2BQ92831 832 aa15.23■□□□□ 0.03
H3F3B-213ENST00000593254 CCDC136Q96JN2 1154 aa15.23■□□□□ 0.03
H3F3B-213ENST00000593254 CTAGE1Q96RT6 745 aa15.23■□□□□ 0.03
H3F3B-213ENST00000593254 SEC63Q9UGP8 760 aaKnown RBP15.23■□□□□ 0.03
H3F3B-213ENST00000593254 SLC12A7Q9Y666 1083 aa15.23■□□□□ 0.03
H3F3B-213ENST00000593254 HOXD8P13378 290 aaPredicted RBP15.22■□□□□ 0.03
H3F3B-213ENST00000593254 CASTP20810 708 aaKnown RBP15.22■□□□□ 0.03
H3F3B-213ENST00000593254 KCNJ6P48051 423 aa15.22■□□□□ 0.03
H3F3B-213ENST00000593254 MRE11P49959 708 aa15.22■□□□□ 0.03
H3F3B-213ENST00000593254 LAMC2Q13753 1193 aa15.22■□□□□ 0.03
H3F3B-213ENST00000593254 DGKDQ16760 1214 aa15.22■□□□□ 0.03
H3F3B-213ENST00000593254 DHX37Q8IY37 1157 aaKnown RBP15.22■□□□□ 0.03
H3F3B-213ENST00000593254 RASEFQ8IZ41 740 aa15.22■□□□□ 0.03
H3F3B-213ENST00000593254 PPTC7Q8NI37 304 aa15.22■□□□□ 0.03
H3F3B-213ENST00000593254 GADD45GIP1Q8TAE8 222 aaPredicted RBP15.22■□□□□ 0.03
H3F3B-213ENST00000593254 PPP1R13LQ8WUF5 828 aa15.22■□□□□ 0.03
H3F3B-213ENST00000593254 NEK1Q96PY6 1258 aa15.22■□□□□ 0.03
H3F3B-213ENST00000593254 SUGCTQ9HAC7 445 aa15.22■□□□□ 0.03
H3F3B-213ENST00000593254 CFAP54Q96N23 3096 aa15.22■□□□□ 0.03
H3F3B-213ENST00000593254 PIK3CDO00329 1044 aa15.21■□□□□ 0.03
H3F3B-213ENST00000593254 CENPBP07199 599 aaPredicted RBP15.21■□□□□ 0.03
H3F3B-213ENST00000593254 TGFB3P10600 412 aa15.21■□□□□ 0.03
H3F3B-213ENST00000593254 ERVK-21P61565 698 aa15.21■□□□□ 0.03
H3F3B-213ENST00000593254 MRPS9P82933 396 aaKnown RBP15.21■□□□□ 0.03
H3F3B-213ENST00000593254 EXOSC10Q01780 885 aaKnown RBP15.21■□□□□ 0.03
H3F3B-213ENST00000593254 MYSM1Q5VVJ2 828 aa15.21■□□□□ 0.03
H3F3B-213ENST00000593254 TMTC3Q6ZXV5 915 aa15.21■□□□□ 0.03
H3F3B-213ENST00000593254 TMCO2Q7Z6W1 182 aaPredicted RBP15.21■□□□□ 0.03
H3F3B-213ENST00000593254 SESTD1Q86VW0 696 aa15.21■□□□□ 0.03
H3F3B-213ENST00000593254 MICU3Q86XE3 530 aa15.21■□□□□ 0.03
H3F3B-213ENST00000593254 RAB11FIP4Q86YS3 637 aa15.21■□□□□ 0.03
H3F3B-213ENST00000593254 CMTR1Q8N1G2 835 aaKnown RBP15.21■□□□□ 0.03
H3F3B-213ENST00000593254 FANCBQ8NB91 859 aa15.21■□□□□ 0.03
H3F3B-213ENST00000593254 CAGE1Q8TC20 777 aa15.21■□□□□ 0.03
H3F3B-213ENST00000593254 AFAP1L1Q8TED9 768 aa15.21■□□□□ 0.03
H3F3B-213ENST00000593254 MEIS2O14770 477 aa15.2■□□□□ 0.02
H3F3B-213ENST00000593254 STAM2O75886 525 aa15.2■□□□□ 0.02
H3F3B-213ENST00000593254 GJB5O95377 273 aa15.2■□□□□ 0.02
H3F3B-213ENST00000593254 F2P00734 622 aa15.2■□□□□ 0.02
H3F3B-213ENST00000593254 CXCL10P02778 98 aa15.2■□□□□ 0.02
H3F3B-213ENST00000593254 ALADP13716 330 aa15.2■□□□□ 0.02
H3F3B-213ENST00000593254 UBA1P22314 1058 aaKnown RBP15.2■□□□□ 0.02
H3F3B-213ENST00000593254 DEFB103AP81534 67 aa15.2■□□□□ 0.02
H3F3B-213ENST00000593254 SP2Q02086 613 aa15.2■□□□□ 0.02
H3F3B-213ENST00000593254 ADCK5Q3MIX3 580 aa15.2■□□□□ 0.02
H3F3B-213ENST00000593254 CELF3Q5SZQ8 465 aaKnown RBP15.2■□□□□ 0.02
H3F3B-213ENST00000593254 APOA5Q6Q788 366 aa15.2■□□□□ 0.02
H3F3B-213ENST00000593254 USP17L6PQ6QN14 398 aa15.2■□□□□ 0.02
H3F3B-213ENST00000593254 DHX32Q7L7V1 743 aaKnown RBP15.2■□□□□ 0.02
H3F3B-213ENST00000593254 GPKOWQ92917 476 aaPredicted RBP eCLIP15.2■□□□□ 0.025e-14■□□□□ 8.4
H3F3B-213ENST00000593254 INPP4AQ96PE3 977 aaPredicted RBP15.2■□□□□ 0.02
H3F3B-213ENST00000593254 TGS1Q96RS0 853 aaKnown RBP15.2■□□□□ 0.02
H3F3B-213ENST00000593254 RAD9AQ99638 391 aa15.2■□□□□ 0.02
H3F3B-213ENST00000593254 MYO7AQ13402 2215 aa15.2■□□□□ 0.02
H3F3B-213ENST00000593254 MYO15AQ9UKN7 3530 aa15.2■□□□□ 0.02
H3F3B-213ENST00000593254 DMDP11532 3685 aa15.19■□□□□ 0.02
H3F3B-213ENST00000593254 LINC01553A4QN01 128 aa15.19■□□□□ 0.02
H3F3B-213ENST00000593254 PPFIA4O75335 1185 aa15.19■□□□□ 0.02
H3F3B-213ENST00000593254 GGPS1O95749 300 aa15.19■□□□□ 0.02
H3F3B-213ENST00000593254 IL9P15248 144 aa15.19■□□□□ 0.02
H3F3B-213ENST00000593254 KCNA5P22460 613 aa15.19■□□□□ 0.02
H3F3B-213ENST00000593254 ICAM3P32942 547 aa15.19■□□□□ 0.02
H3F3B-213ENST00000593254 CHMP4BP1P59074 171 aa15.19■□□□□ 0.02
H3F3B-213ENST00000593254 NHLH1Q02575 133 aa15.19■□□□□ 0.02
H3F3B-213ENST00000593254 RBL2Q08999 1139 aa15.19■□□□□ 0.02
H3F3B-213ENST00000593254 KRT32Q14532 448 aa15.19■□□□□ 0.02
H3F3B-213ENST00000593254 PTGISQ16647 500 aa15.19■□□□□ 0.02
H3F3B-213ENST00000593254 HSDL1Q3SXM5 330 aa15.19■□□□□ 0.02
H3F3B-213ENST00000593254 GNPTABQ3T906 1256 aa15.19■□□□□ 0.02
H3F3B-213ENST00000593254 SMARCC2Q8TAQ2 1214 aa15.19■□□□□ 0.02
H3F3B-213ENST00000593254 CUL5Q93034 780 aa15.19■□□□□ 0.02
H3F3B-213ENST00000593254 ZFP91Q96JP5 570 aaPredicted RBP15.19■□□□□ 0.02
H3F3B-213ENST00000593254 TCEANC2Q96MN5 208 aa15.19■□□□□ 0.02
H3F3B-213ENST00000593254 ZBED2Q9BTP6 218 aa15.19■□□□□ 0.02
H3F3B-213ENST00000593254 KATNAL1Q9BW62 490 aa15.19■□□□□ 0.02
H3F3B-213ENST00000593254 NOD1Q9Y239 953 aa15.19■□□□□ 0.02
H3F3B-213ENST00000593254 MICAL3Q7RTP6 2002 aa15.18■□□□□ 0.02
H3F3B-213ENST00000593254 POTEB3A0JP26 581 aa15.18■□□□□ 0.02
H3F3B-213ENST00000593254 GRXCR2A6NFK2 248 aa15.18■□□□□ 0.02
H3F3B-213ENST00000593254 HAS3O00219 553 aa15.18■□□□□ 0.02
H3F3B-213ENST00000593254 ZNF286BP0CG31 522 aa15.18■□□□□ 0.02
H3F3B-213ENST00000593254 SELPP16109 830 aa15.18■□□□□ 0.02
H3F3B-213ENST00000593254 PSEN2P49810 448 aa15.18■□□□□ 0.02
H3F3B-213ENST00000593254 MFSD10Q14728 455 aa15.18■□□□□ 0.02
H3F3B-213ENST00000593254 TCTN1Q2MV58 587 aa15.18■□□□□ 0.02
H3F3B-213ENST00000593254 PCNX4Q63HM2 1172 aa15.18■□□□□ 0.02
H3F3B-213ENST00000593254 PTCRAQ6ISU1 281 aaPredicted RBP15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms