RNA–Protein interactions for RNA: ENST00000589949.1

H3F3B-209, Transcript of H3 histone family member 3B, humanhuman

TSL 2

Gene H3F3B, Length 842 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-209ENST00000589949 TRIM50Q86XT4 487 aa20.77■□□□□ 0.92
H3F3B-209ENST00000589949 CCDC82Q8N4S0 544 aa20.77■□□□□ 0.92
H3F3B-209ENST00000589949 SMARCC2Q8TAQ2 1214 aa20.77■□□□□ 0.92
H3F3B-209ENST00000589949 GPR20Q99678 358 aa20.77■□□□□ 0.92
H3F3B-209ENST00000589949 LZTS2Q9BRK4 669 aa20.77■□□□□ 0.92
H3F3B-209ENST00000589949 TUT1Q9H6E5 874 aaKnown RBP20.77■□□□□ 0.92
H3F3B-209ENST00000589949 TTC28Q96AY4 2481 aa20.76■□□□□ 0.91
H3F3B-209ENST00000589949 FIBPO43427 364 aa20.76■□□□□ 0.91
H3F3B-209ENST00000589949 SMIM10L2AP0DMW4 78 aa20.76■□□□□ 0.91
H3F3B-209ENST00000589949 SMIM10L2BP0DMW5 78 aa20.76■□□□□ 0.91
H3F3B-209ENST00000589949 CNKSR3Q6P9H4 555 aa20.76■□□□□ 0.91
H3F3B-209ENST00000589949 METTL7BQ6UX53 244 aa20.76■□□□□ 0.91
H3F3B-209ENST00000589949 TMTC2Q8N394 836 aa20.76■□□□□ 0.91
H3F3B-209ENST00000589949 TCEANC2Q96MN5 208 aa20.76■□□□□ 0.91
H3F3B-209ENST00000589949 SEC63Q9UGP8 760 aaKnown RBP20.76■□□□□ 0.91
H3F3B-209ENST00000589949 TREHO43280 583 aa20.75■□□□□ 0.91
H3F3B-209ENST00000589949 ATP9AO75110 1047 aa20.75■□□□□ 0.91
H3F3B-209ENST00000589949 STAM2O75886 525 aa20.75■□□□□ 0.91
H3F3B-209ENST00000589949 GNAQP50148 359 aa20.75■□□□□ 0.91
H3F3B-209ENST00000589949 MKRN4PQ13434 485 aaPredicted RBP20.75■□□□□ 0.91
H3F3B-209ENST00000589949 UBE2SQ16763 222 aa20.75■□□□□ 0.91
H3F3B-209ENST00000589949 GNPTABQ3T906 1256 aa20.75■□□□□ 0.91
H3F3B-209ENST00000589949 TMTC3Q6ZXV5 915 aa20.75■□□□□ 0.91
H3F3B-209ENST00000589949 RASEFQ8IZ41 740 aa20.75■□□□□ 0.91
H3F3B-209ENST00000589949 FANCBQ8NB91 859 aa20.75■□□□□ 0.91
H3F3B-209ENST00000589949 RNPEPQ9H4A4 650 aa20.75■□□□□ 0.91
H3F3B-209ENST00000589949 XIRP2A4UGR9 3374 aa20.74■□□□□ 0.91
H3F3B-209ENST00000589949 ITGB5P18084 799 aa20.74■□□□□ 0.91
H3F3B-209ENST00000589949 EXOSC10Q01780 885 aaKnown RBP20.74■□□□□ 0.91
H3F3B-209ENST00000589949 NEDD9Q14511 834 aa20.74■□□□□ 0.91
H3F3B-209ENST00000589949 ADCK5Q3MIX3 580 aa20.74■□□□□ 0.91
H3F3B-209ENST00000589949 TJAP1Q5JTD0 557 aa20.74■□□□□ 0.91
H3F3B-209ENST00000589949 SGMS1Q86VZ5 419 aa20.74■□□□□ 0.91
H3F3B-209ENST00000589949 ARNTL2Q8WYA1 636 aa20.74■□□□□ 0.91
H3F3B-209ENST00000589949 CUL5Q93034 780 aa20.74■□□□□ 0.91
H3F3B-209ENST00000589949 ATP6V0A1Q93050 837 aa20.74■□□□□ 0.91
H3F3B-209ENST00000589949 PSTPIP2Q9H939 334 aa20.74■□□□□ 0.91
H3F3B-209ENST00000589949 BRPF3Q9ULD4 1205 aa20.74■□□□□ 0.91
H3F3B-209ENST00000589949 SLC12A7Q9Y666 1083 aa20.74■□□□□ 0.91
H3F3B-209ENST00000589949 MTCH2Q9Y6C9 303 aa20.74■□□□□ 0.91
H3F3B-209ENST00000589949 C17orf102A2RUQ5 167 aa20.73■□□□□ 0.91
H3F3B-209ENST00000589949 NOP56O00567 594 aaKnown RBP20.73■□□□□ 0.91
H3F3B-209ENST00000589949 TLL1O43897 1013 aa20.73■□□□□ 0.91
H3F3B-209ENST00000589949 PARNO95453 639 aaKnown RBP20.73■□□□□ 0.91
H3F3B-209ENST00000589949 CALM1P0DP23 149 aa20.73■□□□□ 0.91
H3F3B-209ENST00000589949 CALM2P0DP24 149 aa20.73■□□□□ 0.91
H3F3B-209ENST00000589949 CALM3P0DP25 149 aa20.73■□□□□ 0.91
H3F3B-209ENST00000589949 THPOP40225 353 aa20.73■□□□□ 0.91
H3F3B-209ENST00000589949 KCNJ6P48051 423 aa20.73■□□□□ 0.91
H3F3B-209ENST00000589949 SP4Q02446 784 aa20.73■□□□□ 0.91
H3F3B-209ENST00000589949 TYW1BQ6NUM6 668 aa20.73■□□□□ 0.91
H3F3B-209ENST00000589949 LIN28BQ6ZN17 250 aaKnown RBP eCLIP20.73■□□□□ 0.91
H3F3B-209ENST00000589949 MICU3Q86XE3 530 aa20.73■□□□□ 0.91
H3F3B-209ENST00000589949 MICALL1Q8N3F8 863 aa20.73■□□□□ 0.91
H3F3B-209ENST00000589949 SETD4Q9NVD3 440 aa20.73■□□□□ 0.91
H3F3B-209ENST00000589949 THEGQ9P2T0 379 aa20.73■□□□□ 0.91
H3F3B-209ENST00000589949 PRRC2BQ5JSZ5 2229 aaKnown RBP20.73■□□□□ 0.91
H3F3B-209ENST00000589949 MUC3AQ02505 3323 aa20.72■□□□□ 0.91
H3F3B-209ENST00000589949 ABHD14A-ACY1A0A1B0GW23 586 aa20.72■□□□□ 0.91
H3F3B-209ENST00000589949 LPXNO60711 386 aa20.72■□□□□ 0.91
H3F3B-209ENST00000589949 POU3F3P20264 500 aaPredicted RBP20.72■□□□□ 0.91
H3F3B-209ENST00000589949 ADAM17P78536 824 aa20.72■□□□□ 0.91
H3F3B-209ENST00000589949 FUT2Q10981 343 aa20.72■□□□□ 0.91
H3F3B-209ENST00000589949 UTP14CQ5TAP6 766 aaKnown RBP20.72■□□□□ 0.91
H3F3B-209ENST00000589949 XRRA1Q6P2D8 792 aa20.72■□□□□ 0.91
H3F3B-209ENST00000589949 APOA5Q6Q788 366 aa20.72■□□□□ 0.91
H3F3B-209ENST00000589949 CENPQQ7L2Z9 268 aaPredicted RBP20.72■□□□□ 0.91
H3F3B-209ENST00000589949 DBF4BQ8NFT6 615 aa20.72■□□□□ 0.91
H3F3B-209ENST00000589949 ATXN2LQ8WWM7 1075 aaKnown RBP20.72■□□□□ 0.91
H3F3B-209ENST00000589949 ASB2Q96Q27 587 aa20.72■□□□□ 0.91
H3F3B-209ENST00000589949 SENP7Q9BQF6 1050 aa20.72■□□□□ 0.91
H3F3B-209ENST00000589949 USP26Q9BXU7 913 aa20.72■□□□□ 0.91
H3F3B-209ENST00000589949 RSPH10B2B2RC85 870 aa20.71■□□□□ 0.91
H3F3B-209ENST00000589949 KIF28PB7ZC32 967 aa20.71■□□□□ 0.91
H3F3B-209ENST00000589949 LGR5O75473 907 aa20.71■□□□□ 0.91
H3F3B-209ENST00000589949 RSPH10BP0C881 870 aa20.71■□□□□ 0.91
H3F3B-209ENST00000589949 KCNA2P16389 499 aa20.71■□□□□ 0.91
H3F3B-209ENST00000589949 NEK1Q96PY6 1258 aa20.71■□□□□ 0.91
H3F3B-209ENST00000589949 UBIAD1Q9Y5Z9 338 aa20.71■□□□□ 0.91
H3F3B-209ENST00000589949 CNTNAP5Q8WYK1 1306 aa20.71■□□□□ 0.91
H3F3B-209ENST00000589949 GSTTP1A0A1W2PQM5 241 aa20.7■□□□□ 0.9
H3F3B-209ENST00000589949 GJB5O95377 273 aa20.7■□□□□ 0.9
H3F3B-209ENST00000589949 TFF2Q03403 129 aa20.7■□□□□ 0.9
H3F3B-209ENST00000589949 GRB10Q13322 594 aa20.7■□□□□ 0.9
H3F3B-209ENST00000589949 IKBKEQ14164 716 aa20.7■□□□□ 0.9
H3F3B-209ENST00000589949 WWC2Q6AWC2 1192 aa20.7■□□□□ 0.9
H3F3B-209ENST00000589949 FAM117BQ6P1L5 589 aa20.7■□□□□ 0.9
H3F3B-209ENST00000589949 HEATR3Q7Z4Q2 680 aa20.7■□□□□ 0.9
H3F3B-209ENST00000589949 FAM217BQ9NTX9 383 aaPredicted RBP20.7■□□□□ 0.9
H3F3B-209ENST00000589949 PCDHA6Q9UN73 950 aa20.7■□□□□ 0.9
H3F3B-209ENST00000589949 PCDHA8Q9Y5H6 950 aa20.7■□□□□ 0.9
H3F3B-209ENST00000589949 CTSHP09668 335 aa20.69■□□□□ 0.9
H3F3B-209ENST00000589949 TSGA10IPQ3SY00 556 aa20.69■□□□□ 0.9
H3F3B-209ENST00000589949 PLEKHG4Q58EX7 1191 aa20.69■□□□□ 0.9
H3F3B-209ENST00000589949 LMBR1Q8WVP7 490 aa20.69■□□□□ 0.9
H3F3B-209ENST00000589949 SYMPKQ92797 1274 aaKnown RBP20.69■□□□□ 0.9
H3F3B-209ENST00000589949 GPRASP2Q96D09 838 aa20.69■□□□□ 0.9
H3F3B-209ENST00000589949 ZBED2Q9BTP6 218 aa20.69■□□□□ 0.9
H3F3B-209ENST00000589949 PKD2L1Q9P0L9 805 aa20.69■□□□□ 0.9
H3F3B-209ENST00000589949 TCF7P36402 384 aaPredicted RBP20.68■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms