RNA–Protein interactions for RNA: ENST00000587776.1

HDAC5-206, Transcript of histone deacetylase 5, humanhuman

TSL 3

Gene HDAC5, Length 917 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5-206ENST00000587776 SMIM10L2AP0DMW4 78 aa17.53■□□□□ 0.4
HDAC5-206ENST00000587776 SMIM10L2BP0DMW5 78 aa17.53■□□□□ 0.4
HDAC5-206ENST00000587776 WTAPQ15007 396 aa17.53■□□□□ 0.4
HDAC5-206ENST00000587776 EXOC6Q8TAG9 804 aa17.53■□□□□ 0.4
HDAC5-206ENST00000587776 PIBF1Q8WXW3 757 aa17.53■□□□□ 0.4
HDAC5-206ENST00000587776 SEPT8Q92599 483 aa17.53■□□□□ 0.4
HDAC5-206ENST00000587776 C17orf80Q9BSJ5 609 aa17.53■□□□□ 0.4
HDAC5-206ENST00000587776 EPHX3Q9H6B9 360 aa17.53■□□□□ 0.4
HDAC5-206ENST00000587776 UBE2ZQ9H832 354 aaPredicted RBP17.53■□□□□ 0.4
HDAC5-206ENST00000587776 HCN4Q9Y3Q4 1203 aa17.53■□□□□ 0.4
HDAC5-206ENST00000587776 U3KPZ7 1027 aaPredicted RBP17.53■□□□□ 0.4
HDAC5-206ENST00000587776 PNMA6FA0A0J9YX94 578 aa17.52■□□□□ 0.4
HDAC5-206ENST00000587776 RUFY2Q8WXA3 655 aa17.52■□□□□ 0.4
HDAC5-206ENST00000587776 YME1L1Q96TA2 773 aa17.52■□□□□ 0.4
HDAC5-206ENST00000587776 RIOX1Q9H6W3 641 aa17.52■□□□□ 0.4
HDAC5-206ENST00000587776 TREHO43280 583 aa17.51■□□□□ 0.39
HDAC5-206ENST00000587776 STAM2O75886 525 aa17.51■□□□□ 0.39
HDAC5-206ENST00000587776 UPP2O95045 317 aa17.51■□□□□ 0.39
HDAC5-206ENST00000587776 GNAT1P11488 350 aa17.51■□□□□ 0.39
HDAC5-206ENST00000587776 NEDD9Q14511 834 aa17.51■□□□□ 0.39
HDAC5-206ENST00000587776 PTPROQ16827 1216 aa17.51■□□□□ 0.39
HDAC5-206ENST00000587776 PLEKHG4Q58EX7 1191 aa17.51■□□□□ 0.39
HDAC5-206ENST00000587776 TMEM31Q5JXX7 168 aa17.51■□□□□ 0.39
HDAC5-206ENST00000587776 CYFIP1Q7L576 1253 aa17.51■□□□□ 0.39
HDAC5-206ENST00000587776 CATIPQ7Z7H3 387 aa17.51■□□□□ 0.39
HDAC5-206ENST00000587776 USP26Q9BXU7 913 aa17.51■□□□□ 0.39
HDAC5-206ENST00000587776 ZNF215Q9UL58 517 aaPredicted RBP17.51■□□□□ 0.39
HDAC5-206ENST00000587776 CAND2O75155 1236 aa17.5■□□□□ 0.39
HDAC5-206ENST00000587776 CYP21A2P08686 494 aa17.5■□□□□ 0.39
HDAC5-206ENST00000587776 KCNA5P22460 613 aa17.5■□□□□ 0.39
HDAC5-206ENST00000587776 SP4Q02446 784 aa17.5■□□□□ 0.39
HDAC5-206ENST00000587776 SLC35G1Q2M3R5 365 aa17.5■□□□□ 0.39
HDAC5-206ENST00000587776 NCOA7Q8NI08 942 aa17.5■□□□□ 0.39
HDAC5-206ENST00000587776 SMARCC2Q8TAQ2 1214 aa17.5■□□□□ 0.39
HDAC5-206ENST00000587776 CUL5Q93034 780 aa17.5■□□□□ 0.39
HDAC5-206ENST00000587776 LRFN3Q9BTN0 628 aa17.5■□□□□ 0.39
HDAC5-206ENST00000587776 RNPEPQ9H4A4 650 aa17.5■□□□□ 0.39
HDAC5-206ENST00000587776 RTEL1Q9NZ71 1219 aa17.5■□□□□ 0.39
HDAC5-206ENST00000587776 ATG2AQ2TAZ0 1938 aa17.5■□□□□ 0.39
HDAC5-206ENST00000587776 FIBPO43427 364 aa17.49■□□□□ 0.39
HDAC5-206ENST00000587776 CYTH3O43739 400 aa17.49■□□□□ 0.39
HDAC5-206ENST00000587776 MRPS9P82933 396 aaKnown RBP17.49■□□□□ 0.39
HDAC5-206ENST00000587776 HTRA4P83105 476 aaPredicted RBP17.49■□□□□ 0.39
HDAC5-206ENST00000587776 TTC22Q5TAA0 569 aa17.49■□□□□ 0.39
HDAC5-206ENST00000587776 UTP14CQ5TAP6 766 aaKnown RBP17.49■□□□□ 0.39
HDAC5-206ENST00000587776 METTL7BQ6UX53 244 aa17.49■□□□□ 0.39
HDAC5-206ENST00000587776 TRIM50Q86XT4 487 aa17.49■□□□□ 0.39
HDAC5-206ENST00000587776 MRPL38Q96DV4 380 aaKnown RBP17.49■□□□□ 0.39
HDAC5-206ENST00000587776 SAMD11Q96NU1 681 aa17.49■□□□□ 0.39
HDAC5-206ENST00000587776 INPP4AQ96PE3 977 aaPredicted RBP17.49■□□□□ 0.39
HDAC5-206ENST00000587776 BCAS3Q9H6U6 928 aa17.49■□□□□ 0.39
HDAC5-206ENST00000587776 SENP2Q9HC62 589 aa17.49■□□□□ 0.39
HDAC5-206ENST00000587776 SETD4Q9NVD3 440 aa17.49■□□□□ 0.39
HDAC5-206ENST00000587776 FRMPD4Q14CM0 1322 aa17.48■□□□□ 0.39
HDAC5-206ENST00000587776 E7EWF7 191 aa17.48■□□□□ 0.39
HDAC5-206ENST00000587776 GSPT1P15170 499 aaKnown RBP17.48■□□□□ 0.39
HDAC5-206ENST00000587776 HOXC8P31273 242 aa17.48■□□□□ 0.39
HDAC5-206ENST00000587776 SSTR3P32745 418 aaPredicted RBP17.48■□□□□ 0.39
HDAC5-206ENST00000587776 ICAM3P32942 547 aa17.48■□□□□ 0.39
HDAC5-206ENST00000587776 ARHGAP4P98171 946 aa17.48■□□□□ 0.39
HDAC5-206ENST00000587776 PTH1RQ03431 593 aa17.48■□□□□ 0.39
HDAC5-206ENST00000587776 LEXMQ3ZCV2 418 aa17.48■□□□□ 0.39
HDAC5-206ENST00000587776 EPC2Q52LR7 807 aa17.48■□□□□ 0.39
HDAC5-206ENST00000587776 TIGD5Q53EQ6 642 aa17.48■□□□□ 0.39
HDAC5-206ENST00000587776 EP400NLQ6ZTU2 488 aa17.48■□□□□ 0.39
HDAC5-206ENST00000587776 SP7Q8TDD2 431 aaPredicted RBP17.48■□□□□ 0.39
HDAC5-206ENST00000587776 GPR20Q99678 358 aa17.48■□□□□ 0.39
HDAC5-206ENST00000587776 IFIH1Q9BYX4 1025 aaKnown RBP17.48■□□□□ 0.39
HDAC5-206ENST00000587776 SEC63Q9UGP8 760 aaKnown RBP17.48■□□□□ 0.39
HDAC5-206ENST00000587776 LOXHD1Q8IVV2 1947 aa17.47■□□□□ 0.39
HDAC5-206ENST00000587776 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.47■□□□□ 0.39
HDAC5-206ENST00000587776 FAM86C2PA6NEL3 165 aa17.47■□□□□ 0.39
HDAC5-206ENST00000587776 SPATA31C2B4DYI2 1134 aa17.47■□□□□ 0.39
HDAC5-206ENST00000587776 TROAPQ12815 778 aa17.47■□□□□ 0.39
HDAC5-206ENST00000587776 MKRN4PQ13434 485 aaPredicted RBP17.47■□□□□ 0.39
HDAC5-206ENST00000587776 GPM6BQ13491 265 aa17.47■□□□□ 0.39
HDAC5-206ENST00000587776 CTCFLQ8NI51 663 aaPredicted RBP17.47■□□□□ 0.39
HDAC5-206ENST00000587776 APBB2Q92870 758 aa17.47■□□□□ 0.39
HDAC5-206ENST00000587776 KHSRPQ92945 711 aaKnown RBP eCLIP17.47■□□□□ 0.39
HDAC5-206ENST00000587776 TOP1MTQ969P6 601 aa17.47■□□□□ 0.39
HDAC5-206ENST00000587776 RRP36Q96EU6 259 aaKnown RBP17.47■□□□□ 0.39
HDAC5-206ENST00000587776 COL4A6Q14031 1691 aa17.47■□□□□ 0.39
HDAC5-206ENST00000587776 KIF5BP33176 963 aa17.46■□□□□ 0.39
HDAC5-206ENST00000587776 SEMA3FQ13275 785 aa17.46■□□□□ 0.39
HDAC5-206ENST00000587776 PTCRAQ6ISU1 281 aaPredicted RBP17.46■□□□□ 0.39
HDAC5-206ENST00000587776 NLRX1Q86UT6 975 aa17.46■□□□□ 0.39
HDAC5-206ENST00000587776 TMEM192Q8IY95 271 aa17.46■□□□□ 0.39
HDAC5-206ENST00000587776 LMBR1Q8WVP7 490 aa17.46■□□□□ 0.39
HDAC5-206ENST00000587776 LOC101059915A0A1B0GWI6 518 aaPredicted RBP17.45■□□□□ 0.38
HDAC5-206ENST00000587776 IL9P15248 144 aa17.45■□□□□ 0.38
HDAC5-206ENST00000587776 CHMLP26374 656 aa17.45■□□□□ 0.38
HDAC5-206ENST00000587776 PDE4AP27815 886 aa17.45■□□□□ 0.38
HDAC5-206ENST00000587776 PCNX4Q63HM2 1172 aa17.45■□□□□ 0.38
HDAC5-206ENST00000587776 USP17L6PQ6QN14 398 aa17.45■□□□□ 0.38
HDAC5-206ENST00000587776 CASC1Q6TDU7 716 aa17.45■□□□□ 0.38
HDAC5-206ENST00000587776 GIMAP8Q8ND71 665 aaPredicted RBP17.45■□□□□ 0.38
HDAC5-206ENST00000587776 BANK1Q8NDB2 785 aa17.45■□□□□ 0.38
HDAC5-206ENST00000587776 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.45■□□□□ 0.38
HDAC5-206ENST00000587776 MYL10Q9BUA6 226 aa17.45■□□□□ 0.38
HDAC5-206ENST00000587776 SPZ1Q9BXG8 430 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms