RNA–Protein interactions for RNA: ENST00000587537.5

CLPTM1-207, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 2

Gene CLPTM1, Length 737 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-207ENST00000587537 HMGCRP04035 888 aa11.65□□□□□ -0.54
CLPTM1-207ENST00000587537 CYP2B6P20813 491 aa11.65□□□□□ -0.54
CLPTM1-207ENST00000587537 MARCKSP29966 332 aaPredicted RBP11.65□□□□□ -0.54
CLPTM1-207ENST00000587537 UBA7P41226 1012 aa11.65□□□□□ -0.54
CLPTM1-207ENST00000587537 TXKP42681 527 aa11.65□□□□□ -0.54
CLPTM1-207ENST00000587537 ACVR2BQ13705 512 aa11.65□□□□□ -0.54
CLPTM1-207ENST00000587537 AXDND1Q5T1B0 1012 aaPredicted RBP11.65□□□□□ -0.54
CLPTM1-207ENST00000587537 RESP18Q5W5W9 173 aa11.65□□□□□ -0.54
CLPTM1-207ENST00000587537 KRT79Q5XKE5 535 aa11.65□□□□□ -0.54
CLPTM1-207ENST00000587537 METTL7BQ6UX53 244 aa11.65□□□□□ -0.54
CLPTM1-207ENST00000587537 NPLOC4Q8TAT6 608 aa11.65□□□□□ -0.54
CLPTM1-207ENST00000587537 CD99L2Q8TCZ2 262 aa11.65□□□□□ -0.54
CLPTM1-207ENST00000587537 RAET1EQ8TD07 263 aa11.65□□□□□ -0.54
CLPTM1-207ENST00000587537 EMID1Q96A84 441 aaPredicted RBP11.65□□□□□ -0.54
CLPTM1-207ENST00000587537 PURBQ96QR8 312 aaKnown RBP11.65□□□□□ -0.54
CLPTM1-207ENST00000587537 FTOQ9C0B1 505 aaKnown RBP eCLIP11.65□□□□□ -0.54
CLPTM1-207ENST00000587537 CCSER1Q9C0I3 900 aa11.65□□□□□ -0.54
CLPTM1-207ENST00000587537 TMEM60Q9H2L4 133 aa11.65□□□□□ -0.54
CLPTM1-207ENST00000587537 CUEDC2Q9H467 287 aa11.65□□□□□ -0.54
CLPTM1-207ENST00000587537 MAGEF1Q9HAY2 307 aa11.65□□□□□ -0.54
CLPTM1-207ENST00000587537 WDR64B1ANS9 1081 aa11.64□□□□□ -0.55
CLPTM1-207ENST00000587537 MSCO60682 206 aa11.64□□□□□ -0.55
CLPTM1-207ENST00000587537 RGS20O76081 388 aa11.64□□□□□ -0.55
CLPTM1-207ENST00000587537 SNAI1O95863 264 aaPredicted RBP11.64□□□□□ -0.55
CLPTM1-207ENST00000587537 ARP10275 920 aa11.64□□□□□ -0.55
CLPTM1-207ENST00000587537 KCNA2P16389 499 aa11.64□□□□□ -0.55
CLPTM1-207ENST00000587537 CTCFP49711 727 aaPredicted RBP11.64□□□□□ -0.55
CLPTM1-207ENST00000587537 PRKCZQ05513 592 aa11.64□□□□□ -0.55
CLPTM1-207ENST00000587537 LAMC2Q13753 1193 aa11.64□□□□□ -0.55
CLPTM1-207ENST00000587537 PKN2Q16513 984 aaKnown RBP11.64□□□□□ -0.55
CLPTM1-207ENST00000587537 BRDTQ58F21 947 aaPredicted RBP11.64□□□□□ -0.55
CLPTM1-207ENST00000587537 KANK3Q6NY19 840 aa11.64□□□□□ -0.55
CLPTM1-207ENST00000587537 CCDC62Q6P9F0 684 aa11.64□□□□□ -0.55
CLPTM1-207ENST00000587537 SEPT14Q6ZU15 432 aa11.64□□□□□ -0.55
CLPTM1-207ENST00000587537 OTOP1Q7RTM1 612 aa11.64□□□□□ -0.55
CLPTM1-207ENST00000587537 CYP2W1Q8TAV3 490 aa11.64□□□□□ -0.55
CLPTM1-207ENST00000587537 CALML4Q96GE6 196 aa11.64□□□□□ -0.55
CLPTM1-207ENST00000587537 JPH1Q9HDC5 661 aaPredicted RBP11.64□□□□□ -0.55
CLPTM1-207ENST00000587537 LMBRD1Q9NUN5 540 aa11.64□□□□□ -0.55
CLPTM1-207ENST00000587537 SLC9A2Q9UBY0 812 aa11.64□□□□□ -0.55
CLPTM1-207ENST00000587537 HOOK1Q9UJC3 728 aaKnown RBP11.64□□□□□ -0.55
CLPTM1-207ENST00000587537 DDX41Q9UJV9 622 aaKnown RBP11.64□□□□□ -0.55
CLPTM1-207ENST00000587537 VAV3Q9UKW4 847 aa11.64□□□□□ -0.55
CLPTM1-207ENST00000587537 GH1P01241 217 aa11.63□□□□□ -0.55
CLPTM1-207ENST00000587537 TXNP10599 105 aaKnown RBP11.63□□□□□ -0.55
CLPTM1-207ENST00000587537 AKR1A1P14550 325 aa11.63□□□□□ -0.55
CLPTM1-207ENST00000587537 CAPN2P17655 700 aa11.63□□□□□ -0.55
CLPTM1-207ENST00000587537 CTGFP29279 349 aa11.63□□□□□ -0.55
CLPTM1-207ENST00000587537 TECP42680 631 aa11.63□□□□□ -0.55
CLPTM1-207ENST00000587537 FAM160A1Q05DH4 1040 aa11.63□□□□□ -0.55
CLPTM1-207ENST00000587537 EPHA7Q15375 998 aa11.63□□□□□ -0.55
CLPTM1-207ENST00000587537 DUSP28Q4G0W2 176 aa11.63□□□□□ -0.55
CLPTM1-207ENST00000587537 TAPT1Q6NXT6 567 aa11.63□□□□□ -0.55
CLPTM1-207ENST00000587537 B3GNT9Q6UX72 402 aa11.63□□□□□ -0.55
CLPTM1-207ENST00000587537 ELOA2Q8IYF1 753 aaPredicted RBP11.63□□□□□ -0.55
CLPTM1-207ENST00000587537 SYAP1Q96A49 352 aaPredicted RBP11.63□□□□□ -0.55
CLPTM1-207ENST00000587537 CDK5RAP3Q96JB5 506 aa11.63□□□□□ -0.55
CLPTM1-207ENST00000587537 ANP32EQ9BTT0 268 aa11.63□□□□□ -0.55
CLPTM1-207ENST00000587537 POLR3CQ9BUI4 534 aaPredicted RBP11.63□□□□□ -0.55
CLPTM1-207ENST00000587537 ARHGAP39Q9C0H5 1083 aa11.63□□□□□ -0.55
CLPTM1-207ENST00000587537 LRRC27Q9C0I9 530 aa11.63□□□□□ -0.55
CLPTM1-207ENST00000587537 KATNBL1Q9H079 304 aa11.63□□□□□ -0.55
CLPTM1-207ENST00000587537 CSRNP2Q9H175 543 aa11.63□□□□□ -0.55
CLPTM1-207ENST00000587537 GDPD2Q9HCC8 539 aa11.63□□□□□ -0.55
CLPTM1-207ENST00000587537 TUFT1Q9NNX1 390 aa11.63□□□□□ -0.55
CLPTM1-207ENST00000587537 STK17AQ9UEE5 414 aa11.63□□□□□ -0.55
CLPTM1-207ENST00000587537 FAM184BQ9ULE4 1060 aa11.63□□□□□ -0.55
CLPTM1-207ENST00000587537 PCDHA10Q9Y5I2 948 aa11.63□□□□□ -0.55
CLPTM1-207ENST00000587537 DHX15O43143 795 aaKnown RBP11.62□□□□□ -0.55
CLPTM1-207ENST00000587537 ADCY3O60266 1144 aa11.62□□□□□ -0.55
CLPTM1-207ENST00000587537 CAPN15O75808 1086 aa11.62□□□□□ -0.55
CLPTM1-207ENST00000587537 P4HBP07237 508 aaKnown RBP11.62□□□□□ -0.55
CLPTM1-207ENST00000587537 PSAPP07602 524 aa11.62□□□□□ -0.55
CLPTM1-207ENST00000587537 UBA1P22314 1058 aaKnown RBP11.62□□□□□ -0.55
CLPTM1-207ENST00000587537 RPA1P27694 616 aa11.62□□□□□ -0.55
CLPTM1-207ENST00000587537 SLC26A2P50443 739 aa11.62□□□□□ -0.55
CLPTM1-207ENST00000587537 SPIRE1Q08AE8 756 aa11.62□□□□□ -0.55
CLPTM1-207ENST00000587537 SEMA3FQ13275 785 aa11.62□□□□□ -0.55
CLPTM1-207ENST00000587537 ITGB3BPQ13352 177 aaPredicted RBP11.62□□□□□ -0.55
CLPTM1-207ENST00000587537 CELF3Q5SZQ8 465 aaKnown RBP11.62□□□□□ -0.55
CLPTM1-207ENST00000587537 HYIQ5T013 277 aa11.62□□□□□ -0.55
CLPTM1-207ENST00000587537 MIS18BP1Q6P0N0 1132 aa11.62□□□□□ -0.55
CLPTM1-207ENST00000587537 MIER3Q7Z3K6 550 aa11.62□□□□□ -0.55
CLPTM1-207ENST00000587537 FBXO16Q8IX29 292 aaPredicted RBP11.62□□□□□ -0.55
CLPTM1-207ENST00000587537 DHX37Q8IY37 1157 aaKnown RBP11.62□□□□□ -0.55
CLPTM1-207ENST00000587537 FSIP1Q8NA03 581 aa11.62□□□□□ -0.55
CLPTM1-207ENST00000587537 IQUBQ8NA54 791 aa11.62□□□□□ -0.55
CLPTM1-207ENST00000587537 ATP6V0A1Q93050 837 aa11.62□□□□□ -0.55
CLPTM1-207ENST00000587537 TIGD1Q96MW7 591 aa11.62□□□□□ -0.55
CLPTM1-207ENST00000587537 MLXIPQ9HAP2 919 aa11.62□□□□□ -0.55
CLPTM1-207ENST00000587537 DDX19AQ9NUU7 478 aaKnown RBP11.62□□□□□ -0.55
CLPTM1-207ENST00000587537 ZHX1Q9UKY1 873 aaPredicted RBP11.62□□□□□ -0.55
CLPTM1-207ENST00000587537 KCNH3Q9ULD8 1083 aa11.62□□□□□ -0.55
CLPTM1-207ENST00000587537 HPSEQ9Y251 543 aa11.62□□□□□ -0.55
CLPTM1-207ENST00000587537 PPME1Q9Y570 386 aa11.62□□□□□ -0.55
CLPTM1-207ENST00000587537 NOP56O00567 594 aaKnown RBP11.61□□□□□ -0.55
CLPTM1-207ENST00000587537 CTAGE5O15320 804 aa11.61□□□□□ -0.55
CLPTM1-207ENST00000587537 SEPT4O43236 478 aa11.61□□□□□ -0.55
CLPTM1-207ENST00000587537 KPNA6O60684 536 aa11.61□□□□□ -0.55
CLPTM1-207ENST00000587537 KINO60870 393 aaKnown RBP11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms