RNA–Protein interactions for RNA: ENST00000587173.5

VAT1-205, Transcript of vesicle amine transport 1, humanhuman

TSL 2 BASIC

Gene VAT1, Length 1,174 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-205ENST00000587173 ICAM3P32942 547 aa18.12■□□□□ 0.49
VAT1-205ENST00000587173 KIF5BP33176 963 aa18.12■□□□□ 0.49
VAT1-205ENST00000587173 SEMA3FQ13275 785 aa18.12■□□□□ 0.49
VAT1-205ENST00000587173 NEDD9Q14511 834 aa18.12■□□□□ 0.49
VAT1-205ENST00000587173 CASC1Q6TDU7 716 aa18.12■□□□□ 0.49
VAT1-205ENST00000587173 METTL7BQ6UX53 244 aa18.12■□□□□ 0.49
VAT1-205ENST00000587173 LIN28BQ6ZN17 250 aaKnown RBP eCLIP18.12■□□□□ 0.49
VAT1-205ENST00000587173 CYFIP1Q7L576 1253 aa18.12■□□□□ 0.49
VAT1-205ENST00000587173 DBF4BQ8NFT6 615 aa18.12■□□□□ 0.49
VAT1-205ENST00000587173 CTCFLQ8NI51 663 aaPredicted RBP18.12■□□□□ 0.49
VAT1-205ENST00000587173 TGS1Q96RS0 853 aaKnown RBP18.12■□□□□ 0.49
VAT1-205ENST00000587173 MYL10Q9BUA6 226 aa18.12■□□□□ 0.49
VAT1-205ENST00000587173 RBM8AQ9Y5S9 174 aaKnown RBP18.12■□□□□ 0.49
VAT1-205ENST00000587173 LINC01553A4QN01 128 aa18.11■□□□□ 0.49
VAT1-205ENST00000587173 SPATA31C2B4DYI2 1134 aa18.11■□□□□ 0.49
VAT1-205ENST00000587173 TREHO43280 583 aa18.11■□□□□ 0.49
VAT1-205ENST00000587173 FIBPO43427 364 aa18.11■□□□□ 0.49
VAT1-205ENST00000587173 DDAH1O94760 285 aa18.11■□□□□ 0.49
VAT1-205ENST00000587173 COL9A1P20849 921 aa18.11■□□□□ 0.49
VAT1-205ENST00000587173 HOXC8P31273 242 aa18.11■□□□□ 0.49
VAT1-205ENST00000587173 ERVK-21P61565 698 aa18.11■□□□□ 0.49
VAT1-205ENST00000587173 ZNF654Q8IZM8 581 aa18.11■□□□□ 0.49
VAT1-205ENST00000587173 TMTC2Q8N394 836 aa18.11■□□□□ 0.49
VAT1-205ENST00000587173 SMARCC2Q8TAQ2 1214 aa18.11■□□□□ 0.49
VAT1-205ENST00000587173 CUL5Q93034 780 aa18.11■□□□□ 0.49
VAT1-205ENST00000587173 HLA-CQ95604 372 aa18.11■□□□□ 0.49
VAT1-205ENST00000587173 RRP36Q96EU6 259 aaKnown RBP18.11■□□□□ 0.49
VAT1-205ENST00000587173 MAP3K14Q99558 947 aa18.11■□□□□ 0.49
VAT1-205ENST00000587173 SPZ1Q9BXG8 430 aa18.11■□□□□ 0.49
VAT1-205ENST00000587173 USP26Q9BXU7 913 aa18.11■□□□□ 0.49
VAT1-205ENST00000587173 LY9Q9HBG7 655 aa18.11■□□□□ 0.49
VAT1-205ENST00000587173 PRRC2BQ5JSZ5 2229 aaKnown RBP18.1■□□□□ 0.49
VAT1-205ENST00000587173 PTPRSQ13332 1948 aa18.1■□□□□ 0.49
VAT1-205ENST00000587173 AMHP03971 560 aa18.1■□□□□ 0.49
VAT1-205ENST00000587173 GNAQP50148 359 aa18.1■□□□□ 0.49
VAT1-205ENST00000587173 USP17L6PQ6QN14 398 aa18.1■□□□□ 0.49
VAT1-205ENST00000587173 NFXL1Q6ZNB6 911 aa18.1■□□□□ 0.49
VAT1-205ENST00000587173 MYOCDQ8IZQ8 938 aa18.1■□□□□ 0.49
VAT1-205ENST00000587173 GPR20Q99678 358 aa18.1■□□□□ 0.49
VAT1-205ENST00000587173 LZTS2Q9BRK4 669 aa18.1■□□□□ 0.49
VAT1-205ENST00000587173 MTA3Q9BTC8 594 aa18.1■□□□□ 0.49
VAT1-205ENST00000587173 RNPEPQ9H4A4 650 aa18.1■□□□□ 0.49
VAT1-205ENST00000587173 SUGCTQ9HAC7 445 aa18.1■□□□□ 0.49
VAT1-205ENST00000587173 LMCD1Q9NZU5 365 aa18.1■□□□□ 0.49
VAT1-205ENST00000587173 SEC63Q9UGP8 760 aaKnown RBP18.1■□□□□ 0.49
VAT1-205ENST00000587173 XIRP2A4UGR9 3374 aa18.09■□□□□ 0.49
VAT1-205ENST00000587173 CTSHP09668 335 aa18.09■□□□□ 0.49
VAT1-205ENST00000587173 SMARCA1P28370 1054 aa18.09■□□□□ 0.49
VAT1-205ENST00000587173 MCM5P33992 734 aa18.09■□□□□ 0.49
VAT1-205ENST00000587173 MKRN4PQ13434 485 aaPredicted RBP18.09■□□□□ 0.49
VAT1-205ENST00000587173 PLEKHG4Q58EX7 1191 aa18.09■□□□□ 0.49
VAT1-205ENST00000587173 UTP14CQ5TAP6 766 aaKnown RBP18.09■□□□□ 0.49
VAT1-205ENST00000587173 PCNX4Q63HM2 1172 aa18.09■□□□□ 0.49
VAT1-205ENST00000587173 TRIM50Q86XT4 487 aa18.09■□□□□ 0.49
VAT1-205ENST00000587173 SETD4Q9NVD3 440 aa18.09■□□□□ 0.49
VAT1-205ENST00000587173 INSL6Q9Y581 213 aa18.09■□□□□ 0.49
VAT1-205ENST00000587173 COL4A4P53420 1690 aaPredicted RBP18.09■□□□□ 0.49
VAT1-205ENST00000587173 CCDC69A6NI79 296 aa18.08■□□□□ 0.48
VAT1-205ENST00000587173 MEIS2O14770 477 aa18.08■□□□□ 0.48
VAT1-205ENST00000587173 PRC1O43663 620 aa18.08■□□□□ 0.48
VAT1-205ENST00000587173 CAND2O75155 1236 aa18.08■□□□□ 0.48
VAT1-205ENST00000587173 PLEKHA8P1O95397 391 aa18.08■□□□□ 0.48
VAT1-205ENST00000587173 GNAT1P11488 350 aa18.08■□□□□ 0.48
VAT1-205ENST00000587173 SP4Q02446 784 aa18.08■□□□□ 0.48
VAT1-205ENST00000587173 XRRA1Q6P2D8 792 aa18.08■□□□□ 0.48
VAT1-205ENST00000587173 SEPT8Q92599 483 aa18.08■□□□□ 0.48
VAT1-205ENST00000587173 TMEM87BQ96K49 555 aa18.08■□□□□ 0.48
VAT1-205ENST00000587173 ZNF215Q9UL58 517 aaPredicted RBP18.08■□□□□ 0.48
VAT1-205ENST00000587173 TELO2Q9Y4R8 837 aa18.08■□□□□ 0.48
VAT1-205ENST00000587173 REV3LO60673 3130 aa18.08■□□□□ 0.48
VAT1-205ENST00000587173 PIK3CDO00329 1044 aa18.07■□□□□ 0.48
VAT1-205ENST00000587173 SH2B2O14492 632 aaPredicted RBP18.07■□□□□ 0.48
VAT1-205ENST00000587173 CALM1P0DP23 149 aa18.07■□□□□ 0.48
VAT1-205ENST00000587173 CALM2P0DP24 149 aa18.07■□□□□ 0.48
VAT1-205ENST00000587173 CALM3P0DP25 149 aa18.07■□□□□ 0.48
VAT1-205ENST00000587173 NLRX1Q86UT6 975 aa18.07■□□□□ 0.48
VAT1-205ENST00000587173 SRBD1Q8N5C6 995 aaKnown RBP18.07■□□□□ 0.48
VAT1-205ENST00000587173 SENP7Q9BQF6 1050 aa18.07■□□□□ 0.48
VAT1-205ENST00000587173 C17orf80Q9BSJ5 609 aa18.07■□□□□ 0.48
VAT1-205ENST00000587173 OSBPL7Q9BZF2 842 aa18.07■□□□□ 0.48
VAT1-205ENST00000587173 MYH7BA7E2Y1 1941 aa18.07■□□□□ 0.48
VAT1-205ENST00000587173 BAZ2BQ9UIF8 2168 aaKnown RBP18.06■□□□□ 0.48
VAT1-205ENST00000587173 RXRAP19793 462 aa18.06■□□□□ 0.48
VAT1-205ENST00000587173 HTRA4P83105 476 aaPredicted RBP18.06■□□□□ 0.48
VAT1-205ENST00000587173 ARHGAP4P98171 946 aa18.06■□□□□ 0.48
VAT1-205ENST00000587173 FBXO22Q8NEZ5 403 aa18.06■□□□□ 0.48
VAT1-205ENST00000587173 TRANK1O15050 2925 aa18.05■□□□□ 0.48
VAT1-205ENST00000587173 ADAM17P78536 824 aa18.05■□□□□ 0.48
VAT1-205ENST00000587173 CMTR1Q8N1G2 835 aaKnown RBP18.05■□□□□ 0.48
VAT1-205ENST00000587173 GIMAP8Q8ND71 665 aaPredicted RBP18.05■□□□□ 0.48
VAT1-205ENST00000587173 SP7Q8TDD2 431 aaPredicted RBP18.05■□□□□ 0.48
VAT1-205ENST00000587173 LMBR1Q8WVP7 490 aa18.05■□□□□ 0.48
VAT1-205ENST00000587173 YME1L1Q96TA2 773 aa18.05■□□□□ 0.48
VAT1-205ENST00000587173 LSG1Q9H089 658 aaKnown RBP18.05■□□□□ 0.48
VAT1-205ENST00000587173 RAPGEFL1Q9UHV5 662 aa18.05■□□□□ 0.48
VAT1-205ENST00000587173 SLC27A2O14975 620 aa18.04■□□□□ 0.48
VAT1-205ENST00000587173 LIFRP42702 1097 aa18.04■□□□□ 0.48
VAT1-205ENST00000587173 COL9A3Q14050 684 aaPredicted RBP18.04■□□□□ 0.48
VAT1-205ENST00000587173 SYNE3Q6ZMZ3 975 aa18.04■□□□□ 0.48
VAT1-205ENST00000587173 RAB11FIP4Q86YS3 637 aa18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 130.9 ms