RNA–Protein interactions for RNA: ENST00000587170.1

CXXC1-208, Transcript of CXXC finger protein 1, humanhuman

TSL 2

Gene CXXC1, Length 476 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1-208ENST00000587170 ZP2Q05996 745 aa16.43■□□□□ 0.22
CXXC1-208ENST00000587170 POTEBQ6S5H4 581 aa16.43■□□□□ 0.22
CXXC1-208ENST00000587170 STAG2Q8N3U4 1231 aa16.43■□□□□ 0.22
CXXC1-208ENST00000587170 BANK1Q8NDB2 785 aa16.43■□□□□ 0.22
CXXC1-208ENST00000587170 FNDC1Q4ZHG4 1894 aaPredicted RBP16.43■□□□□ 0.22
CXXC1-208ENST00000587170 LOC101059915A0A1B0GWI6 518 aaPredicted RBP16.42■□□□□ 0.22
CXXC1-208ENST00000587170 C17orf102A2RUQ5 167 aa16.42■□□□□ 0.22
CXXC1-208ENST00000587170 C19orf67A6NJJ6 358 aa16.42■□□□□ 0.22
CXXC1-208ENST00000587170 TRIM6-TRIM34B2RNG4 842 aa16.42■□□□□ 0.22
CXXC1-208ENST00000587170 H3BRB1 525 aa16.42■□□□□ 0.22
CXXC1-208ENST00000587170 ZBTB5O15062 677 aa16.42■□□□□ 0.22
CXXC1-208ENST00000587170 DHX16O60231 1041 aaKnown RBP16.42■□□□□ 0.22
CXXC1-208ENST00000587170 LGALS2P05162 132 aa16.42■□□□□ 0.22
CXXC1-208ENST00000587170 SMIM10L2AP0DMW4 78 aa16.42■□□□□ 0.22
CXXC1-208ENST00000587170 SMIM10L2BP0DMW5 78 aa16.42■□□□□ 0.22
CXXC1-208ENST00000587170 SEC23AQ15436 765 aa16.42■□□□□ 0.22
CXXC1-208ENST00000587170 SEPT8Q92599 483 aa16.42■□□□□ 0.22
CXXC1-208ENST00000587170 ATP6V0A1Q93050 837 aa16.42■□□□□ 0.22
CXXC1-208ENST00000587170 DSCC1Q9BVC3 393 aa16.42■□□□□ 0.22
CXXC1-208ENST00000587170 KCNH6Q9H252 994 aa16.42■□□□□ 0.22
CXXC1-208ENST00000587170 OSBPL3Q9H4L5 887 aa16.42■□□□□ 0.22
CXXC1-208ENST00000587170 TUT1Q9H6E5 874 aaKnown RBP16.42■□□□□ 0.22
CXXC1-208ENST00000587170 CNNM2Q9H8M5 875 aa16.42■□□□□ 0.22
CXXC1-208ENST00000587170 CFAP54Q96N23 3096 aa16.42■□□□□ 0.22
CXXC1-208ENST00000587170 WDR81Q562E7 1941 aa16.42■□□□□ 0.22
CXXC1-208ENST00000587170 C5orf67F2Z3F1 127 aa16.41■□□□□ 0.22
CXXC1-208ENST00000587170 TREHO43280 583 aa16.41■□□□□ 0.22
CXXC1-208ENST00000587170 DCXO43602 365 aa16.41■□□□□ 0.22
CXXC1-208ENST00000587170 LINC00271P0C7V0 271 aa16.41■□□□□ 0.22
CXXC1-208ENST00000587170 MYCLP12524 364 aaPredicted RBP16.41■□□□□ 0.22
CXXC1-208ENST00000587170 CCND2P30279 289 aa16.41■□□□□ 0.22
CXXC1-208ENST00000587170 SSTR3P32745 418 aaPredicted RBP16.41■□□□□ 0.22
CXXC1-208ENST00000587170 RRP1P56182 461 aaKnown RBP16.41■□□□□ 0.22
CXXC1-208ENST00000587170 ADAM17P78536 824 aa16.41■□□□□ 0.22
CXXC1-208ENST00000587170 GPM6BQ13491 265 aa16.41■□□□□ 0.22
CXXC1-208ENST00000587170 SLC35G1Q2M3R5 365 aa16.41■□□□□ 0.22
CXXC1-208ENST00000587170 TCEAL5Q5H9L2 206 aa16.41■□□□□ 0.22
CXXC1-208ENST00000587170 TMEM192Q8IY95 271 aa16.41■□□□□ 0.22
CXXC1-208ENST00000587170 APBB2Q92870 758 aa16.41■□□□□ 0.22
CXXC1-208ENST00000587170 GPKOWQ92917 476 aaPredicted RBP eCLIP16.41■□□□□ 0.22
CXXC1-208ENST00000587170 YME1L1Q96TA2 773 aa16.41■□□□□ 0.22
CXXC1-208ENST00000587170 OSBPL7Q9BZF2 842 aa16.41■□□□□ 0.22
CXXC1-208ENST00000587170 KRT23Q9C075 422 aa16.41■□□□□ 0.22
CXXC1-208ENST00000587170 NSUN3Q9H649 340 aaKnown RBP16.41■□□□□ 0.22
CXXC1-208ENST00000587170 RC3H2Q9HBD1 1191 aaKnown RBP16.41■□□□□ 0.22
CXXC1-208ENST00000587170 MAD2L2Q9UI95 211 aa16.41■□□□□ 0.22
CXXC1-208ENST00000587170 FAM50BQ9Y247 325 aa16.41■□□□□ 0.22
CXXC1-208ENST00000587170 PCDHA1Q9Y5I3 950 aa16.41■□□□□ 0.22
CXXC1-208ENST00000587170 ZDBF2Q9HCK1 2354 aa16.4■□□□□ 0.22
CXXC1-208ENST00000587170 PALM3A6NDB9 673 aaPredicted RBP16.4■□□□□ 0.22
CXXC1-208ENST00000587170 KLRF2D3W0D1 207 aa16.4■□□□□ 0.22
CXXC1-208ENST00000587170 H3BQ06 376 aaPredicted RBP16.4■□□□□ 0.22
CXXC1-208ENST00000587170 HOXA13P31271 388 aaPredicted RBP16.4■□□□□ 0.22
CXXC1-208ENST00000587170 ICAM3P32942 547 aa16.4■□□□□ 0.22
CXXC1-208ENST00000587170 CTC1Q2NKJ3 1217 aa16.4■□□□□ 0.22
CXXC1-208ENST00000587170 FAM26DQ5JW98 314 aa16.4■□□□□ 0.22
CXXC1-208ENST00000587170 SMC5Q8IY18 1101 aa16.4■□□□□ 0.22
CXXC1-208ENST00000587170 RILPL2Q969X0 211 aa16.4■□□□□ 0.22
CXXC1-208ENST00000587170 INPP4AQ96PE3 977 aaPredicted RBP16.4■□□□□ 0.22
CXXC1-208ENST00000587170 UBAC1Q9BSL1 405 aa16.4■□□□□ 0.22
CXXC1-208ENST00000587170 USP26Q9BXU7 913 aa16.4■□□□□ 0.22
CXXC1-208ENST00000587170 LNPKQ9C0E8 428 aa16.4■□□□□ 0.22
CXXC1-208ENST00000587170 RNPEPQ9H4A4 650 aa16.4■□□□□ 0.22
CXXC1-208ENST00000587170 VAT1LQ9HCJ6 419 aa16.4■□□□□ 0.22
CXXC1-208ENST00000587170 STAM2O75886 525 aa16.39■□□□□ 0.21
CXXC1-208ENST00000587170 LTBRP36941 435 aa16.39■□□□□ 0.21
CXXC1-208ENST00000587170 TRAF1Q13077 416 aa16.39■□□□□ 0.21
CXXC1-208ENST00000587170 IMMTQ16891 758 aaKnown RBP16.39■□□□□ 0.21
CXXC1-208ENST00000587170 IFIT1BQ5T764 474 aaKnown RBP16.39■□□□□ 0.21
CXXC1-208ENST00000587170 METTL7BQ6UX53 244 aa16.39■□□□□ 0.21
CXXC1-208ENST00000587170 ADHFE1Q8IWW8 467 aa16.39■□□□□ 0.21
CXXC1-208ENST00000587170 IFIH1Q9BYX4 1025 aaKnown RBP16.39■□□□□ 0.21
CXXC1-208ENST00000587170 RIOX1Q9H6W3 641 aa16.39■□□□□ 0.21
CXXC1-208ENST00000587170 GCOM1H8Y6P7 765 aaPredicted RBP16.38■□□□□ 0.21
CXXC1-208ENST00000587170 NCK2O43639 380 aa16.38■□□□□ 0.21
CXXC1-208ENST00000587170 SORBS3O60504 671 aa16.38■□□□□ 0.21
CXXC1-208ENST00000587170 CTSHP09668 335 aa16.38■□□□□ 0.21
CXXC1-208ENST00000587170 POLR2MP0CAP2 368 aa16.38■□□□□ 0.21
CXXC1-208ENST00000587170 MRPS9P82933 396 aaKnown RBP16.38■□□□□ 0.21
CXXC1-208ENST00000587170 SEMA3FQ13275 785 aa16.38■□□□□ 0.21
CXXC1-208ENST00000587170 GNPTABQ3T906 1256 aa16.38■□□□□ 0.21
CXXC1-208ENST00000587170 CWC27Q6UX04 472 aaKnown RBP16.38■□□□□ 0.21
CXXC1-208ENST00000587170 RPAINQ86UA6 219 aa16.38■□□□□ 0.21
CXXC1-208ENST00000587170 PLEKHM2Q8IWE5 1019 aa16.38■□□□□ 0.21
CXXC1-208ENST00000587170 CLP1Q92989 425 aaKnown RBP16.38■□□□□ 0.21
CXXC1-208ENST00000587170 GPR20Q99678 358 aa16.38■□□□□ 0.21
CXXC1-208ENST00000587170 LMAN2LQ9H0V9 348 aa16.38■□□□□ 0.21
CXXC1-208ENST00000587170 BCAS3Q9H6U6 928 aa16.38■□□□□ 0.21
CXXC1-208ENST00000587170 MLXIPQ9HAP2 919 aa16.38■□□□□ 0.21
CXXC1-208ENST00000587170 DIAPH3Q9NSV4 1193 aa16.38■□□□□ 0.21
CXXC1-208ENST00000587170 CACNA1HO95180 2353 aa16.37■□□□□ 0.21
CXXC1-208ENST00000587170 EVPLQ92817 2033 aa16.37■□□□□ 0.21
CXXC1-208ENST00000587170 SPATA31C2B4DYI2 1134 aa16.37■□□□□ 0.21
CXXC1-208ENST00000587170 HIP1O00291 1037 aa16.37■□□□□ 0.21
CXXC1-208ENST00000587170 RB1P06400 928 aa16.37■□□□□ 0.21
CXXC1-208ENST00000587170 GNAT1P11488 350 aa16.37■□□□□ 0.21
CXXC1-208ENST00000587170 NHLH1Q02575 133 aa16.37■□□□□ 0.21
CXXC1-208ENST00000587170 NEDD9Q14511 834 aa16.37■□□□□ 0.21
CXXC1-208ENST00000587170 GRM4Q14833 912 aa16.37■□□□□ 0.21
CXXC1-208ENST00000587170 SMAD2Q15796 467 aaKnown RBP16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms