RNA–Protein interactions for RNA: ENST00000586253.1

SMAD4-204, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 784 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-204ENST00000586253 CCDC85CA6NKD9 419 aa9.2□□□□□ -0.94
SMAD4-204ENST00000586253 MEIS2O14770 477 aa9.2□□□□□ -0.94
SMAD4-204ENST00000586253 LARGE1O95461 756 aa9.2□□□□□ -0.94
SMAD4-204ENST00000586253 ZNF865P0CJ78 1059 aaPredicted RBP9.2□□□□□ -0.94
SMAD4-204ENST00000586253 GNA11P29992 359 aa9.2□□□□□ -0.94
SMAD4-204ENST00000586253 CCND3P30281 292 aaPredicted RBP9.2□□□□□ -0.94
SMAD4-204ENST00000586253 HOXA13P31271 388 aaPredicted RBP9.2□□□□□ -0.94
SMAD4-204ENST00000586253 GJA8P48165 433 aa9.2□□□□□ -0.94
SMAD4-204ENST00000586253 ACVR2BQ13705 512 aa9.2□□□□□ -0.94
SMAD4-204ENST00000586253 ARHGEF16Q5VV41 709 aa9.2□□□□□ -0.94
SMAD4-204ENST00000586253 RNF19BQ6ZMZ0 732 aa9.2□□□□□ -0.94
SMAD4-204ENST00000586253 NOL8Q76FK4 1167 aaKnown RBP9.2□□□□□ -0.94
SMAD4-204ENST00000586253 TRPV1Q8NER1 839 aa9.2□□□□□ -0.94
SMAD4-204ENST00000586253 SMARCC2Q8TAQ2 1214 aa9.2□□□□□ -0.94
SMAD4-204ENST00000586253 U2AF1L4Q8WU68 220 aaKnown RBP9.2□□□□□ -0.94
SMAD4-204ENST00000586253 WASF1Q92558 559 aa9.2□□□□□ -0.94
SMAD4-204ENST00000586253 PURBQ96QR8 312 aaKnown RBP9.2□□□□□ -0.94
SMAD4-204ENST00000586253 TAAR1Q96RJ0 339 aa9.2□□□□□ -0.94
SMAD4-204ENST00000586253 RMDN3Q96TC7 470 aa9.2□□□□□ -0.94
SMAD4-204ENST00000586253 LLPHQ9BRT6 129 aaKnown RBP9.2□□□□□ -0.94
SMAD4-204ENST00000586253 KATNBL1Q9H079 304 aa9.2□□□□□ -0.94
SMAD4-204ENST00000586253 VTA1Q9NP79 307 aa9.2□□□□□ -0.94
SMAD4-204ENST00000586253 RIC8AQ9NPQ8 531 aa9.2□□□□□ -0.94
SMAD4-204ENST00000586253 PXMP2Q9NR77 195 aa9.2□□□□□ -0.94
SMAD4-204ENST00000586253 DDX20Q9UHI6 824 aaKnown RBP9.2□□□□□ -0.94
SMAD4-204ENST00000586253 FRMPD4Q14CM0 1322 aa9.2□□□□□ -0.94
SMAD4-204ENST00000586253 FRMPD3Q5JV73 1810 aa9.19□□□□□ -0.94
SMAD4-204ENST00000586253 SMCO2A6NFE2 343 aa9.19□□□□□ -0.94
SMAD4-204ENST00000586253 STAM2O75886 525 aa9.19□□□□□ -0.94
SMAD4-204ENST00000586253 SGPL1O95470 568 aa9.19□□□□□ -0.94
SMAD4-204ENST00000586253 CTDNEP1O95476 244 aa9.19□□□□□ -0.94
SMAD4-204ENST00000586253 FOSP01100 380 aaPredicted RBP9.19□□□□□ -0.94
SMAD4-204ENST00000586253 MYCP01106 439 aaPredicted RBP9.19□□□□□ -0.94
SMAD4-204ENST00000586253 AKR1A1P14550 325 aa9.19□□□□□ -0.94
SMAD4-204ENST00000586253 ADCY7P51828 1080 aa9.19□□□□□ -0.94
SMAD4-204ENST00000586253 ST3GAL1Q11201 340 aa9.19□□□□□ -0.94
SMAD4-204ENST00000586253 MSS51Q4VC12 460 aa9.19□□□□□ -0.94
SMAD4-204ENST00000586253 PRAMEF19Q5SWL8 479 aa9.19□□□□□ -0.94
SMAD4-204ENST00000586253 MCTP2Q6DN12 878 aa9.19□□□□□ -0.94
SMAD4-204ENST00000586253 XRRA1Q6P2D8 792 aa9.19□□□□□ -0.94
SMAD4-204ENST00000586253 USP17L6PQ6QN14 398 aa9.19□□□□□ -0.94
SMAD4-204ENST00000586253 NECAB1Q8N987 351 aa9.19□□□□□ -0.94
SMAD4-204ENST00000586253 NSUN7Q8NE18 718 aaKnown RBP9.19□□□□□ -0.94
SMAD4-204ENST00000586253 BICD2Q8TD16 824 aa9.19□□□□□ -0.94
SMAD4-204ENST00000586253 DEFB118Q96PH6 123 aa9.19□□□□□ -0.94
SMAD4-204ENST00000586253 PDCD2LQ9BRP1 358 aa9.19□□□□□ -0.94
SMAD4-204ENST00000586253 EHMT1Q9H9B1 1298 aa9.19□□□□□ -0.94
SMAD4-204ENST00000586253 C6orf50Q9HD87 102 aa9.19□□□□□ -0.94
SMAD4-204ENST00000586253 ZHX1Q9UKY1 873 aaPredicted RBP9.19□□□□□ -0.94
SMAD4-204ENST00000586253 FAM184BQ9ULE4 1060 aa9.19□□□□□ -0.94
SMAD4-204ENST00000586253 RBM47A0AV96 593 aaKnown RBP9.18□□□□□ -0.94
SMAD4-204ENST00000586253 SPDYE3A6NKU9 549 aa9.18□□□□□ -0.94
SMAD4-204ENST00000586253 PPFIA3O75145 1194 aa9.18□□□□□ -0.94
SMAD4-204ENST00000586253 EIF3JO75822 258 aaKnown RBP9.18□□□□□ -0.94
SMAD4-204ENST00000586253 NR3C2P08235 984 aa9.18□□□□□ -0.94
SMAD4-204ENST00000586253 RARBP10826 455 aa9.18□□□□□ -0.94
SMAD4-204ENST00000586253 XBP1P17861 261 aa9.18□□□□□ -0.94
SMAD4-204ENST00000586253 EIF2AK2P19525 551 aaKnown RBP9.18□□□□□ -0.94
SMAD4-204ENST00000586253 CNGA1P29973 690 aa9.18□□□□□ -0.94
SMAD4-204ENST00000586253 CCND2P30279 289 aa9.18□□□□□ -0.94
SMAD4-204ENST00000586253 CLK2P49760 499 aaKnown RBP9.18□□□□□ -0.94
SMAD4-204ENST00000586253 HMGN5P82970 282 aaKnown RBP9.18□□□□□ -0.94
SMAD4-204ENST00000586253 AP3B2Q13367 1082 aa9.18□□□□□ -0.94
SMAD4-204ENST00000586253 PGM5Q15124 567 aa9.18□□□□□ -0.94
SMAD4-204ENST00000586253 STXBP2Q15833 593 aa9.18□□□□□ -0.94
SMAD4-204ENST00000586253 KIAA1217Q5T5P2 1943 aa9.18□□□□□ -0.94
SMAD4-204ENST00000586253 IQSEC1Q6DN90 963 aa9.18□□□□□ -0.94
SMAD4-204ENST00000586253 GALNT17Q6IS24 598 aa9.18□□□□□ -0.94
SMAD4-204ENST00000586253 TAPT1Q6NXT6 567 aa9.18□□□□□ -0.94
SMAD4-204ENST00000586253 VSIG10LQ86VR7 867 aa9.18□□□□□ -0.94
SMAD4-204ENST00000586253 FCHSD1Q86WN1 690 aa9.18□□□□□ -0.94
SMAD4-204ENST00000586253 FBXO16Q8IX29 292 aaPredicted RBP9.18□□□□□ -0.94
SMAD4-204ENST00000586253 ORC3Q9UBD5 711 aaPredicted RBP9.18□□□□□ -0.94
SMAD4-204ENST00000586253 OGDHLQ9ULD0 1010 aa9.18□□□□□ -0.94
SMAD4-204ENST00000586253 NKRFO15226 690 aaKnown RBP eCLIP9.17□□□□□ -0.94
SMAD4-204ENST00000586253 DUSP11O75319 330 aaKnown RBP9.17□□□□□ -0.94
SMAD4-204ENST00000586253 CD2BP2O95400 341 aaKnown RBP9.17□□□□□ -0.94
SMAD4-204ENST00000586253 FDPSP14324 419 aaKnown RBP9.17□□□□□ -0.94
SMAD4-204ENST00000586253 SMCPP49901 116 aaPredicted RBP9.17□□□□□ -0.94
SMAD4-204ENST00000586253 MDM2Q00987 491 aaPredicted RBP9.17□□□□□ -0.94
SMAD4-204ENST00000586253 UBE2SQ16763 222 aa9.17□□□□□ -0.94
SMAD4-204ENST00000586253 CCDC144BQ3MJ40 725 aa9.17□□□□□ -0.94
SMAD4-204ENST00000586253 PCNX4Q63HM2 1172 aa9.17□□□□□ -0.94
SMAD4-204ENST00000586253 TREML4Q6UXN2 200 aa9.17□□□□□ -0.94
SMAD4-204ENST00000586253 CCDC83Q8IWF9 413 aa9.17□□□□□ -0.94
SMAD4-204ENST00000586253 REXO1Q8N1G1 1221 aaKnown RBP9.17□□□□□ -0.94
SMAD4-204ENST00000586253 DAGLBQ8NCG7 672 aa9.17□□□□□ -0.94
SMAD4-204ENST00000586253 SCFD2Q8WU76 684 aa9.17□□□□□ -0.94
SMAD4-204ENST00000586253 SHISA4Q96DD7 197 aa9.17□□□□□ -0.94
SMAD4-204ENST00000586253 TMX3Q96JJ7 454 aa9.17□□□□□ -0.94
SMAD4-204ENST00000586253 VPS54Q9P1Q0 977 aa9.17□□□□□ -0.94
SMAD4-204ENST00000586253 PCDHA6Q9UN73 950 aa9.17□□□□□ -0.94
SMAD4-204ENST00000586253 Q9Y3F1 56 aa9.17□□□□□ -0.94
SMAD4-204ENST00000586253 PCDHA8Q9Y5H6 950 aa9.17□□□□□ -0.94
SMAD4-204ENST00000586253 JAK2O60674 1132 aa9.16□□□□□ -0.94
SMAD4-204ENST00000586253 TFRCP02786 760 aaKnown RBP9.16□□□□□ -0.94
SMAD4-204ENST00000586253 TGFB3P10600 412 aa9.16□□□□□ -0.94
SMAD4-204ENST00000586253 SREBF1P36956 1147 aa9.16□□□□□ -0.94
SMAD4-204ENST00000586253 SOX10P56693 466 aa9.16□□□□□ -0.94
SMAD4-204ENST00000586253 NLRP5P59047 1200 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms