RNA–Protein interactions for RNA: ENST00000585961.1

CLPTM1-204, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 4

Gene CLPTM1, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-204ENST00000585961 CATIPQ7Z7H3 387 aa23.26■■□□□ 1.31
CLPTM1-204ENST00000585961 SERINC5Q86VE9 423 aa23.26■■□□□ 1.31
CLPTM1-204ENST00000585961 MYOCDQ8IZQ8 938 aa23.26■■□□□ 1.31
CLPTM1-204ENST00000585961 NCOA7Q8NI08 942 aa23.26■■□□□ 1.31
CLPTM1-204ENST00000585961 SETD4Q9NVD3 440 aa23.26■■□□□ 1.31
CLPTM1-204ENST00000585961 MYH6P13533 1939 aa23.25■■□□□ 1.31
CLPTM1-204ENST00000585961 NOP56O00567 594 aaKnown RBP23.25■■□□□ 1.31
CLPTM1-204ENST00000585961 LGALS2P05162 132 aa23.25■■□□□ 1.31
CLPTM1-204ENST00000585961 SP4Q02446 784 aa23.25■■□□□ 1.31
CLPTM1-204ENST00000585961 TRAF1Q13077 416 aa23.25■■□□□ 1.31
CLPTM1-204ENST00000585961 IGDCC4Q8TDY8 1250 aa23.25■■□□□ 1.31
CLPTM1-204ENST00000585961 C17orf80Q9BSJ5 609 aa23.25■■□□□ 1.31
CLPTM1-204ENST00000585961 MYL10Q9BUA6 226 aa23.25■■□□□ 1.31
CLPTM1-204ENST00000585961 EPHX3Q9H6B9 360 aa23.25■■□□□ 1.31
CLPTM1-204ENST00000585961 SPATA31C2B4DYI2 1134 aa23.24■■□□□ 1.31
CLPTM1-204ENST00000585961 EFCAB14O75071 495 aa23.24■■□□□ 1.31
CLPTM1-204ENST00000585961 UPP2O95045 317 aa23.24■■□□□ 1.31
CLPTM1-204ENST00000585961 CTSHP09668 335 aa23.24■■□□□ 1.31
CLPTM1-204ENST00000585961 ANTXR2P58335 489 aa23.24■■□□□ 1.31
CLPTM1-204ENST00000585961 IRX6P78412 446 aaPredicted RBP23.24■■□□□ 1.31
CLPTM1-204ENST00000585961 SEMA3FQ13275 785 aa23.24■■□□□ 1.31
CLPTM1-204ENST00000585961 SART3Q15020 963 aaKnown RBP23.24■■□□□ 1.31
CLPTM1-204ENST00000585961 USP17L6PQ6QN14 398 aa23.24■■□□□ 1.31
CLPTM1-204ENST00000585961 INSL6Q9Y581 213 aa23.24■■□□□ 1.31
CLPTM1-204ENST00000585961 LAMA4Q16363 1823 aa23.24■■□□□ 1.31
CLPTM1-204ENST00000585961 AMHP03971 560 aa23.23■■□□□ 1.31
CLPTM1-204ENST00000585961 TRIM50Q86XT4 487 aa23.23■■□□□ 1.31
CLPTM1-204ENST00000585961 TANC1Q9C0D5 1861 aa23.22■■□□□ 1.31
CLPTM1-204ENST00000585961 GNPTABQ3T906 1256 aa23.22■■□□□ 1.31
CLPTM1-204ENST00000585961 PLEKHG4Q58EX7 1191 aa23.22■■□□□ 1.31
CLPTM1-204ENST00000585961 CMTR1Q8N1G2 835 aaKnown RBP23.22■■□□□ 1.31
CLPTM1-204ENST00000585961 SMARCC2Q8TAQ2 1214 aa23.22■■□□□ 1.31
CLPTM1-204ENST00000585961 GPR20Q99678 358 aa23.22■■□□□ 1.31
CLPTM1-204ENST00000585961 USP26Q9BXU7 913 aa23.22■■□□□ 1.31
CLPTM1-204ENST00000585961 LMCD1Q9NZU5 365 aa23.22■■□□□ 1.31
CLPTM1-204ENST00000585961 BDP1A6H8Y1 2624 aa23.21■■□□□ 1.31
CLPTM1-204ENST00000585961 ICAM3P32942 547 aa23.21■■□□□ 1.31
CLPTM1-204ENST00000585961 NEDD9Q14511 834 aa23.21■■□□□ 1.31
CLPTM1-204ENST00000585961 FBXO22Q8NEZ5 403 aa23.21■■□□□ 1.31
CLPTM1-204ENST00000585961 SEPT8Q92599 483 aa23.21■■□□□ 1.31
CLPTM1-204ENST00000585961 INPP4AQ96PE3 977 aaPredicted RBP23.21■■□□□ 1.31
CLPTM1-204ENST00000585961 EMSYQ7Z589 1322 aa23.21■■□□□ 1.31
CLPTM1-204ENST00000585961 PTPRSQ13332 1948 aa23.21■■□□□ 1.31
CLPTM1-204ENST00000585961 NCOR1O75376 2440 aa23.2■■□□□ 1.3
CLPTM1-204ENST00000585961 SGSM2O43147 1006 aa23.2■■□□□ 1.3
CLPTM1-204ENST00000585961 METTL7BQ6UX53 244 aa23.2■■□□□ 1.3
CLPTM1-204ENST00000585961 RRP36Q96EU6 259 aaKnown RBP23.2■■□□□ 1.3
CLPTM1-204ENST00000585961 FIBPO43427 364 aa23.19■■□□□ 1.3
CLPTM1-204ENST00000585961 ARHGAP4P98171 946 aa23.19■■□□□ 1.3
CLPTM1-204ENST00000585961 RAB11FIP4Q86YS3 637 aa23.19■■□□□ 1.3
CLPTM1-204ENST00000585961 MB21D2Q8IYB1 491 aaPredicted RBP23.19■■□□□ 1.3
CLPTM1-204ENST00000585961 MAP4K1Q92918 833 aa23.19■■□□□ 1.3
CLPTM1-204ENST00000585961 KHSRPQ92945 711 aaKnown RBP eCLIP23.19■■□□□ 1.3
CLPTM1-204ENST00000585961 CUL5Q93034 780 aa23.19■■□□□ 1.3
CLPTM1-204ENST00000585961 LY9Q9HBG7 655 aa23.19■■□□□ 1.3
CLPTM1-204ENST00000585961 RBM8AQ9Y5S9 174 aaKnown RBP23.19■■□□□ 1.3
CLPTM1-204ENST00000585961 hCG_1642624A0A1W2PR95 340 aa23.18■■□□□ 1.3
CLPTM1-204ENST00000585961 MEIS2O14770 477 aa23.18■■□□□ 1.3
CLPTM1-204ENST00000585961 GNAT1P11488 350 aa23.18■■□□□ 1.3
CLPTM1-204ENST00000585961 RXRAP19793 462 aa23.18■■□□□ 1.3
CLPTM1-204ENST00000585961 HOXC8P31273 242 aa23.18■■□□□ 1.3
CLPTM1-204ENST00000585961 COL9A3Q14050 684 aaPredicted RBP23.18■■□□□ 1.3
CLPTM1-204ENST00000585961 NFXL1Q6ZNB6 911 aa23.18■■□□□ 1.3
CLPTM1-204ENST00000585961 ZNF654Q8IZM8 581 aa23.18■■□□□ 1.3
CLPTM1-204ENST00000585961 CCDC82Q8N4S0 544 aa23.18■■□□□ 1.3
CLPTM1-204ENST00000585961 SRBD1Q8N5C6 995 aaKnown RBP23.18■■□□□ 1.3
CLPTM1-204ENST00000585961 CTCFLQ8NI51 663 aaPredicted RBP23.18■■□□□ 1.3
CLPTM1-204ENST00000585961 YME1L1Q96TA2 773 aa23.18■■□□□ 1.3
CLPTM1-204ENST00000585961 C1QTNF1Q9BXJ1 281 aa23.18■■□□□ 1.3
CLPTM1-204ENST00000585961 CD320Q9NPF0 282 aa23.18■■□□□ 1.3
CLPTM1-204ENST00000585961 LOC101059915A0A1B0GWI6 518 aaPredicted RBP23.17■■□□□ 1.3
CLPTM1-204ENST00000585961 ATP9AO75110 1047 aa23.17■■□□□ 1.3
CLPTM1-204ENST00000585961 STAM2O75886 525 aa23.17■■□□□ 1.3
CLPTM1-204ENST00000585961 PLEKHA8P1O95397 391 aa23.17■■□□□ 1.3
CLPTM1-204ENST00000585961 KCNA5P22460 613 aa23.17■■□□□ 1.3
CLPTM1-204ENST00000585961 HTRA4P83105 476 aaPredicted RBP23.17■■□□□ 1.3
CLPTM1-204ENST00000585961 MKRN4PQ13434 485 aaPredicted RBP23.17■■□□□ 1.3
CLPTM1-204ENST00000585961 EPC2Q52LR7 807 aa23.17■■□□□ 1.3
CLPTM1-204ENST00000585961 CASC1Q6TDU7 716 aa23.17■■□□□ 1.3
CLPTM1-204ENST00000585961 TOP1MTQ969P6 601 aa23.17■■□□□ 1.3
CLPTM1-204ENST00000585961 UBE2ZQ9H832 354 aaPredicted RBP23.17■■□□□ 1.3
CLPTM1-204ENST00000585961 PKD2L1Q9P0L9 805 aa23.17■■□□□ 1.3
CLPTM1-204ENST00000585961 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP23.16■■□□□ 1.3
CLPTM1-204ENST00000585961 PRC1O43663 620 aa23.16■■□□□ 1.3
CLPTM1-204ENST00000585961 PCNX4Q63HM2 1172 aa23.16■■□□□ 1.3
CLPTM1-204ENST00000585961 SEC63Q9UGP8 760 aaKnown RBP23.16■■□□□ 1.3
CLPTM1-204ENST00000585961 FRMPD4Q14CM0 1322 aa23.15■■□□□ 1.3
CLPTM1-204ENST00000585961 MARK3P27448 753 aa23.15■■□□□ 1.3
CLPTM1-204ENST00000585961 KIF5BP33176 963 aa23.15■■□□□ 1.3
CLPTM1-204ENST00000585961 RUFY4Q6ZNE9 571 aa23.15■■□□□ 1.3
CLPTM1-204ENST00000585961 EP400NLQ6ZTU2 488 aa23.15■■□□□ 1.3
CLPTM1-204ENST00000585961 NLRX1Q86UT6 975 aa23.15■■□□□ 1.3
CLPTM1-204ENST00000585961 LMBR1Q8WVP7 490 aa23.15■■□□□ 1.3
CLPTM1-204ENST00000585961 LRFN3Q9BTN0 628 aa23.15■■□□□ 1.3
CLPTM1-204ENST00000585961 SPZ1Q9BXG8 430 aa23.15■■□□□ 1.3
CLPTM1-204ENST00000585961 PSTPIP2Q9H939 334 aa23.15■■□□□ 1.3
CLPTM1-204ENST00000585961 ZNF215Q9UL58 517 aaPredicted RBP23.15■■□□□ 1.3
CLPTM1-204ENST00000585961 CHRNA1P02708 482 aa23.14■■□□□ 1.29
CLPTM1-204ENST00000585961 ADAM17P78536 824 aa23.14■■□□□ 1.29
CLPTM1-204ENST00000585961 GPM6BQ13491 265 aa23.14■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms