RNA–Protein interactions for RNA: ENST00000584997.1

CASC3-210, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 3

Gene CASC3, Length 543 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-210ENST00000584997 H3BRB1 525 aa12.06□□□□□ -0.48
CASC3-210ENST00000584997 NOP56O00567 594 aaKnown RBP12.06□□□□□ -0.48
CASC3-210ENST00000584997 PPP1R11O60927 126 aaPredicted RBP12.06□□□□□ -0.48
CASC3-210ENST00000584997 UPP2O95045 317 aa12.06□□□□□ -0.48
CASC3-210ENST00000584997 NEFLP07196 543 aa12.06□□□□□ -0.48
CASC3-210ENST00000584997 CTSHP09668 335 aa12.06□□□□□ -0.48
CASC3-210ENST00000584997 SMIM10L2AP0DMW4 78 aa12.06□□□□□ -0.48
CASC3-210ENST00000584997 SMIM10L2BP0DMW5 78 aa12.06□□□□□ -0.48
CASC3-210ENST00000584997 TGFB3P10600 412 aa12.06□□□□□ -0.48
CASC3-210ENST00000584997 IL9P15248 144 aa12.06□□□□□ -0.48
CASC3-210ENST00000584997 HTRA4P83105 476 aaPredicted RBP12.06□□□□□ -0.48
CASC3-210ENST00000584997 TRAF1Q13077 416 aa12.06□□□□□ -0.48
CASC3-210ENST00000584997 PUS10Q3MIT2 529 aaKnown RBP12.06□□□□□ -0.48
CASC3-210ENST00000584997 EPC2Q52LR7 807 aa12.06□□□□□ -0.48
CASC3-210ENST00000584997 PLEKHG4Q58EX7 1191 aa12.06□□□□□ -0.48
CASC3-210ENST00000584997 VSIG10LQ86VR7 867 aa12.06□□□□□ -0.48
CASC3-210ENST00000584997 FCHSD1Q86WN1 690 aa12.06□□□□□ -0.48
CASC3-210ENST00000584997 SP7Q8TDD2 431 aaPredicted RBP12.06□□□□□ -0.48
CASC3-210ENST00000584997 ZFP91Q96JP5 570 aaPredicted RBP12.06□□□□□ -0.48
CASC3-210ENST00000584997 C16orf70Q9BSU1 422 aa12.06□□□□□ -0.48
CASC3-210ENST00000584997 TUT1Q9H6E5 874 aaKnown RBP12.06□□□□□ -0.48
CASC3-210ENST00000584997 RALGAPA2Q2PPJ7 1873 aa12.06□□□□□ -0.48
CASC3-210ENST00000584997 DOCK5Q9H7D0 1870 aa12.06□□□□□ -0.48
CASC3-210ENST00000584997 PRR33A8MZF0 331 aa12.05□□□□□ -0.48
CASC3-210ENST00000584997 H3BQ06 376 aaPredicted RBP12.05□□□□□ -0.48
CASC3-210ENST00000584997 GCOM1H8Y6P7 765 aaPredicted RBP12.05□□□□□ -0.48
CASC3-210ENST00000584997 TREHO43280 583 aa12.05□□□□□ -0.48
CASC3-210ENST00000584997 CAND2O75155 1236 aa12.05□□□□□ -0.48
CASC3-210ENST00000584997 LGALS2P05162 132 aa12.05□□□□□ -0.48
CASC3-210ENST00000584997 POLR2MP0CAP2 368 aa12.05□□□□□ -0.48
CASC3-210ENST00000584997 ALADP13716 330 aa12.05□□□□□ -0.48
CASC3-210ENST00000584997 SP2Q02086 613 aa12.05□□□□□ -0.48
CASC3-210ENST00000584997 MKRN4PQ13434 485 aaPredicted RBP12.05□□□□□ -0.48
CASC3-210ENST00000584997 GNPTABQ3T906 1256 aa12.05□□□□□ -0.48
CASC3-210ENST00000584997 GPKOWQ92917 476 aaPredicted RBP eCLIP12.05□□□□□ -0.485e-7■■■■□ 23.9
CASC3-210ENST00000584997 TOP1MTQ969P6 601 aa12.05□□□□□ -0.48
CASC3-210ENST00000584997 MTMR8Q96EF0 704 aa12.05□□□□□ -0.48
CASC3-210ENST00000584997 UIMC1Q96RL1 719 aa12.05□□□□□ -0.48
CASC3-210ENST00000584997 MAD2L2Q9UI95 211 aa12.05□□□□□ -0.48
CASC3-210ENST00000584997 GRXCR2A6NFK2 248 aa12.04□□□□□ -0.48
CASC3-210ENST00000584997 H3BNC9 293 aa12.04□□□□□ -0.48
CASC3-210ENST00000584997 GNAT1P11488 350 aa12.04□□□□□ -0.48
CASC3-210ENST00000584997 HOXC8P31273 242 aa12.04□□□□□ -0.48
CASC3-210ENST00000584997 TRDNQ13061 729 aa12.04□□□□□ -0.48
CASC3-210ENST00000584997 GPM6BQ13491 265 aa12.04□□□□□ -0.48
CASC3-210ENST00000584997 CSPP1Q1MSJ5 1256 aa12.04□□□□□ -0.48
CASC3-210ENST00000584997 CHD1LQ86WJ1 897 aa12.04□□□□□ -0.48
CASC3-210ENST00000584997 PLEKHM2Q8IWE5 1019 aa12.04□□□□□ -0.48
CASC3-210ENST00000584997 SMC5Q8IY18 1101 aa12.04□□□□□ -0.48
CASC3-210ENST00000584997 TMEM192Q8IY95 271 aa12.04□□□□□ -0.48
CASC3-210ENST00000584997 BANK1Q8NDB2 785 aa12.04□□□□□ -0.48
CASC3-210ENST00000584997 PIGSQ96S52 555 aa12.04□□□□□ -0.48
CASC3-210ENST00000584997 USP26Q9BXU7 913 aa12.04□□□□□ -0.48
CASC3-210ENST00000584997 IFIH1Q9BYX4 1025 aaKnown RBP12.04□□□□□ -0.48
CASC3-210ENST00000584997 RWDD1Q9H446 243 aaPredicted RBP12.04□□□□□ -0.48
CASC3-210ENST00000584997 RNPEPQ9H4A4 650 aa12.04□□□□□ -0.48
CASC3-210ENST00000584997 OSBPL3Q9H4L5 887 aa12.04□□□□□ -0.48
CASC3-210ENST00000584997 FAM50BQ9Y247 325 aa12.04□□□□□ -0.48
CASC3-210ENST00000584997 COL4A6Q14031 1691 aa12.03□□□□□ -0.48
CASC3-210ENST00000584997 ERICH2A1L162 156 aa12.03□□□□□ -0.48
CASC3-210ENST00000584997 PALM3A6NDB9 673 aaPredicted RBP12.03□□□□□ -0.48
CASC3-210ENST00000584997 NEDD9Q14511 834 aa12.03□□□□□ -0.48
CASC3-210ENST00000584997 SEC23AQ15436 765 aa12.03□□□□□ -0.48
CASC3-210ENST00000584997 TCEAL5Q5H9L2 206 aa12.03□□□□□ -0.48
CASC3-210ENST00000584997 CYB5R4Q7L1T6 521 aa12.03□□□□□ -0.48
CASC3-210ENST00000584997 CYFIP1Q7L576 1253 aa12.03□□□□□ -0.48
CASC3-210ENST00000584997 EXOC6Q8TAG9 804 aa12.03□□□□□ -0.48
CASC3-210ENST00000584997 NEK9Q8TD19 979 aa12.03□□□□□ -0.48
CASC3-210ENST00000584997 APBB2Q92870 758 aa12.03□□□□□ -0.48
CASC3-210ENST00000584997 PABPC5Q96DU9 382 aaKnown RBP12.03□□□□□ -0.48
CASC3-210ENST00000584997 NSUN3Q9H649 340 aaKnown RBP12.03□□□□□ -0.48
CASC3-210ENST00000584997 SETD4Q9NVD3 440 aa12.03□□□□□ -0.48
CASC3-210ENST00000584997 ZNF215Q9UL58 517 aaPredicted RBP12.03□□□□□ -0.48
CASC3-210ENST00000584997 PNMA6FA0A0J9YX94 578 aa12.02□□□□□ -0.49
CASC3-210ENST00000584997 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.02□□□□□ -0.49
CASC3-210ENST00000584997 DCXO43602 365 aa12.02□□□□□ -0.49
CASC3-210ENST00000584997 STAM2O75886 525 aa12.02□□□□□ -0.49
CASC3-210ENST00000584997 CTNNB1P35222 781 aa12.02□□□□□ -0.49
CASC3-210ENST00000584997 AAMPQ13685 434 aa12.02□□□□□ -0.49
CASC3-210ENST00000584997 GRM4Q14833 912 aa12.02□□□□□ -0.49
CASC3-210ENST00000584997 METTL7BQ6UX53 244 aa12.02□□□□□ -0.49
CASC3-210ENST00000584997 TRIM50Q86XT4 487 aa12.02□□□□□ -0.49
CASC3-210ENST00000584997 FIBCD1Q8N539 461 aa12.02□□□□□ -0.49
CASC3-210ENST00000584997 INPP4AQ96PE3 977 aaPredicted RBP12.02□□□□□ -0.49
CASC3-210ENST00000584997 GPR20Q99678 358 aa12.02□□□□□ -0.49
CASC3-210ENST00000584997 BCAS3Q9H6U6 928 aa12.02□□□□□ -0.49
CASC3-210ENST00000584997 RIOX1Q9H6W3 641 aa12.02□□□□□ -0.49
CASC3-210ENST00000584997 CLDND1Q9NY35 253 aa12.02□□□□□ -0.49
CASC3-210ENST00000584997 ATG2AQ2TAZ0 1938 aa12.01□□□□□ -0.49
CASC3-210ENST00000584997 IFIT3O14879 490 aaKnown RBP12.01□□□□□ -0.49
CASC3-210ENST00000584997 FIBPO43427 364 aa12.01□□□□□ -0.49
CASC3-210ENST00000584997 ICAM3P32942 547 aa12.01□□□□□ -0.49
CASC3-210ENST00000584997 MRPS9P82933 396 aaKnown RBP12.01□□□□□ -0.49
CASC3-210ENST00000584997 ARHGAP4P98171 946 aa12.01□□□□□ -0.49
CASC3-210ENST00000584997 SP4Q02446 784 aa12.01□□□□□ -0.49
CASC3-210ENST00000584997 NUCB1Q02818 461 aa12.01□□□□□ -0.49
CASC3-210ENST00000584997 SART3Q15020 963 aaKnown RBP12.01□□□□□ -0.49
CASC3-210ENST00000584997 UTP14CQ5TAP6 766 aaKnown RBP12.01□□□□□ -0.49
CASC3-210ENST00000584997 IL17RAQ96F46 866 aa12.01□□□□□ -0.49
CASC3-210ENST00000584997 OSBPL7Q9BZF2 842 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms