RNA–Protein interactions for RNA: ENST00000584112.1

CCDC47-206, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2

Gene CCDC47, Length 588 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-206ENST00000584112 FRMPD2Q68DX3 1309 aaPredicted RBP13.02□□□□□ -0.33
CCDC47-206ENST00000584112 CSPG5O95196 566 aa13.01□□□□□ -0.33
CCDC47-206ENST00000584112 ANGPT1Q15389 498 aa13.01□□□□□ -0.33
CCDC47-206ENST00000584112 MUM1L1Q5H9M0 696 aa13.01□□□□□ -0.33
CCDC47-206ENST00000584112 ASTLQ6HA08 431 aaPredicted RBP13.01□□□□□ -0.33
CCDC47-206ENST00000584112 NSMFQ6X4W1 530 aa13.01□□□□□ -0.33
CCDC47-206ENST00000584112 RUFY2Q8WXA3 655 aa13.01□□□□□ -0.33
CCDC47-206ENST00000584112 KRT23Q9C075 422 aa13.01□□□□□ -0.33
CCDC47-206ENST00000584112 KATNBL1Q9H079 304 aa13.01□□□□□ -0.33
CCDC47-206ENST00000584112 CNNM2Q9H8M5 875 aa13.01□□□□□ -0.33
CCDC47-206ENST00000584112 ADD3Q9UEY8 706 aaKnown RBP13.01□□□□□ -0.33
CCDC47-206ENST00000584112 WDR19Q8NEZ3 1342 aa13.01□□□□□ -0.33
CCDC47-206ENST00000584112 RAD50Q92878 1312 aa13.01□□□□□ -0.33
CCDC47-206ENST00000584112 NLRC5Q86WI3 1866 aa13.01□□□□□ -0.33
CCDC47-206ENST00000584112 LOC102724159A0A0B4J2E5 919 aa13□□□□□ -0.33
CCDC47-206ENST00000584112 C11orf97A0A1B0GVM6 126 aaPredicted RBP13□□□□□ -0.33
CCDC47-206ENST00000584112 H3BNC9 293 aa13□□□□□ -0.33
CCDC47-206ENST00000584112 CABYRO75952 493 aa13□□□□□ -0.33
CCDC47-206ENST00000584112 PDE4AP27815 886 aa13□□□□□ -0.33
CCDC47-206ENST00000584112 TNFAIP2Q03169 654 aa13□□□□□ -0.33
CCDC47-206ENST00000584112 PWP2Q15269 919 aaKnown RBP13□□□□□ -0.33
CCDC47-206ENST00000584112 PNMA1Q8ND90 353 aa13□□□□□ -0.33
CCDC47-206ENST00000584112 MSLNLQ96KJ4 702 aa13□□□□□ -0.33
CCDC47-206ENST00000584112 ZSCAN10Q96SZ4 725 aaPredicted RBP13□□□□□ -0.33
CCDC47-206ENST00000584112 ZKSCAN3Q9BRR0 538 aa13□□□□□ -0.33
CCDC47-206ENST00000584112 SMOC2Q9H3U7 446 aa13□□□□□ -0.33
CCDC47-206ENST00000584112 KAT14Q9H8E8 782 aa13□□□□□ -0.33
CCDC47-206ENST00000584112 DSPP15924 2871 aaKnown RBP12.99□□□□□ -0.33
CCDC47-206ENST00000584112 PTPDC1A2A3K4 754 aa12.99□□□□□ -0.33
CCDC47-206ENST00000584112 B4E1Z4 1266 aa12.99□□□□□ -0.33
CCDC47-206ENST00000584112 NCK2O43639 380 aa12.99□□□□□ -0.33
CCDC47-206ENST00000584112 EYA4O95677 639 aa12.99□□□□□ -0.33
CCDC47-206ENST00000584112 NKX3-2P78367 333 aa12.99□□□□□ -0.33
CCDC47-206ENST00000584112 GPNMBQ14956 572 aa12.99□□□□□ -0.33
CCDC47-206ENST00000584112 NOL8Q76FK4 1167 aaKnown RBP12.99□□□□□ -0.33
CCDC47-206ENST00000584112 ZBTB33Q86T24 672 aa12.99□□□□□ -0.33
CCDC47-206ENST00000584112 RUBCNQ92622 972 aa12.99□□□□□ -0.33
CCDC47-206ENST00000584112 MPHOSPH6Q99547 160 aaKnown RBP12.99□□□□□ -0.33
CCDC47-206ENST00000584112 UBAC1Q9BSL1 405 aa12.99□□□□□ -0.33
CCDC47-206ENST00000584112 VTA1Q9NP79 307 aa12.99□□□□□ -0.33
CCDC47-206ENST00000584112 IGF2RP11717 2491 aa12.99□□□□□ -0.33
CCDC47-206ENST00000584112 GSPT1P15170 499 aaKnown RBP12.98□□□□□ -0.33
CCDC47-206ENST00000584112 IRX6P78412 446 aaPredicted RBP12.98□□□□□ -0.33
CCDC47-206ENST00000584112 BAATQ14032 418 aaPredicted RBP12.98□□□□□ -0.33
CCDC47-206ENST00000584112 FSCN1Q16658 493 aaKnown RBP12.98□□□□□ -0.33
CCDC47-206ENST00000584112 ASPRV1Q53RT3 343 aa12.98□□□□□ -0.33
CCDC47-206ENST00000584112 IQSEC1Q6DN90 963 aa12.98□□□□□ -0.33
CCDC47-206ENST00000584112 ENAHQ8N8S7 591 aaPredicted RBP12.98□□□□□ -0.33
CCDC47-206ENST00000584112 MORC4Q8TE76 937 aa12.98□□□□□ -0.33
CCDC47-206ENST00000584112 AP5M1Q9H0R1 490 aa12.98□□□□□ -0.33
CCDC47-206ENST00000584112 ZSWIM5Q9P217 1185 aa12.98□□□□□ -0.33
CCDC47-206ENST00000584112 USP15Q9Y4E8 981 aaPredicted RBP12.98□□□□□ -0.33
CCDC47-206ENST00000584112 SCN10AQ9Y5Y9 1956 aa12.98□□□□□ -0.33
CCDC47-206ENST00000584112 SMG1Q96Q15 3661 aaKnown RBP12.97□□□□□ -0.33
CCDC47-206ENST00000584112 MICAL3Q7RTP6 2002 aa12.97□□□□□ -0.33
CCDC47-206ENST00000584112 CNOT1A5YKK6 2376 aaKnown RBP12.97□□□□□ -0.33
CCDC47-206ENST00000584112 B4DLN1 442 aa12.97□□□□□ -0.33
CCDC47-206ENST00000584112 NFIBO00712 420 aa12.97□□□□□ -0.33
CCDC47-206ENST00000584112 PI15O43692 258 aa12.97□□□□□ -0.33
CCDC47-206ENST00000584112 ZEB2O60315 1214 aa12.97□□□□□ -0.33
CCDC47-206ENST00000584112 GOLGA8HP0CJ92 632 aa12.97□□□□□ -0.33
CCDC47-206ENST00000584112 NDUFV1P49821 464 aa12.97□□□□□ -0.33
CCDC47-206ENST00000584112 ALDH5A1P51649 535 aaPredicted RBP12.97□□□□□ -0.33
CCDC47-206ENST00000584112 MRPL12P52815 198 aaKnown RBP12.97□□□□□ -0.33
CCDC47-206ENST00000584112 TRDNQ13061 729 aa12.97□□□□□ -0.33
CCDC47-206ENST00000584112 RNF207Q6ZRF8 634 aa12.97□□□□□ -0.33
CCDC47-206ENST00000584112 TLK2Q86UE8 772 aa12.97□□□□□ -0.33
CCDC47-206ENST00000584112 LURAP1LQ8IV03 231 aa12.97□□□□□ -0.33
CCDC47-206ENST00000584112 FBXO16Q8IX29 292 aaPredicted RBP12.97□□□□□ -0.33
CCDC47-206ENST00000584112 RETREG2Q8NC44 543 aa12.97□□□□□ -0.33
CCDC47-206ENST00000584112 PHF7Q9BWX1 381 aaPredicted RBP12.97□□□□□ -0.33
CCDC47-206ENST00000584112 MAF1Q9H063 256 aa12.97□□□□□ -0.33
CCDC47-206ENST00000584112 Q9Y3F1 56 aa12.97□□□□□ -0.33
CCDC47-206ENST00000584112 PARP1P09874 1014 aaKnown RBP12.96□□□□□ -0.33
CCDC47-206ENST00000584112 SUPT20HL2P0C7V6 817 aa12.96□□□□□ -0.33
CCDC47-206ENST00000584112 SP100P23497 879 aaPredicted RBP12.96□□□□□ -0.33
CCDC47-206ENST00000584112 CHMLP26374 656 aa12.96□□□□□ -0.33
CCDC47-206ENST00000584112 CALML3P27482 149 aa12.96□□□□□ -0.33
CCDC47-206ENST00000584112 RPS6P62753 249 aaKnown RBP12.96□□□□□ -0.33
CCDC47-206ENST00000584112 ADAM15Q13444 863 aa12.96□□□□□ -0.33
CCDC47-206ENST00000584112 IFIT1BQ5T764 474 aaKnown RBP12.96□□□□□ -0.33
CCDC47-206ENST00000584112 TAPT1Q6NXT6 567 aa12.96□□□□□ -0.33
CCDC47-206ENST00000584112 EEPD1Q7L9B9 569 aa12.96□□□□□ -0.33
CCDC47-206ENST00000584112 SMRP1Q8NCR6 262 aa12.96□□□□□ -0.33
CCDC47-206ENST00000584112 KREMEN2Q8NCW0 462 aa12.96□□□□□ -0.33
CCDC47-206ENST00000584112 DNERQ8NFT8 737 aa12.96□□□□□ -0.33
CCDC47-206ENST00000584112 CLEC4DQ8WXI8 215 aa12.96□□□□□ -0.33
CCDC47-206ENST00000584112 SEMA4AQ9H3S1 761 aa12.96□□□□□ -0.33
CCDC47-206ENST00000584112 CLEC1BQ9P126 229 aa12.96□□□□□ -0.33
CCDC47-206ENST00000584112 GNEQ9Y223 722 aaKnown RBP12.96□□□□□ -0.33
CCDC47-206ENST00000584112 ABCB11O95342 1321 aa12.95□□□□□ -0.34
CCDC47-206ENST00000584112 BRD1O95696 1058 aa12.95□□□□□ -0.34
CCDC47-206ENST00000584112 SMPD1P17405 629 aa12.95□□□□□ -0.34
CCDC47-206ENST00000584112 CDC37Q16543 378 aaPredicted RBP12.95□□□□□ -0.34
CCDC47-206ENST00000584112 USH1GQ495M9 461 aa12.95□□□□□ -0.34
CCDC47-206ENST00000584112 DUSP28Q4G0W2 176 aa12.95□□□□□ -0.34
CCDC47-206ENST00000584112 SLC30A10Q6XR72 485 aa12.95□□□□□ -0.34
CCDC47-206ENST00000584112 KIAA1211Q6ZU35 1233 aa12.95□□□□□ -0.34
CCDC47-206ENST00000584112 ADGRF4Q8IZF3 695 aa12.95□□□□□ -0.34
CCDC47-206ENST00000584112 RGS22Q8NE09 1264 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms