RNA–Protein interactions for RNA: ENST00000583634.1

TSEN54-210, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 2

Gene TSEN54, Length 282 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-210ENST00000583634 PGBD1Q96JS3 809 aa13.78□□□□□ -0.2
TSEN54-210ENST00000583634 A1CFQ9NQ94 594 aaKnown RBP13.78□□□□□ -0.2
TSEN54-210ENST00000583634 CYP39A1Q9NYL5 469 aa13.78□□□□□ -0.2
TSEN54-210ENST00000583634 MYADML2A6NDP7 307 aa13.77□□□□□ -0.21
TSEN54-210ENST00000583634 LAD1O00515 517 aa13.77□□□□□ -0.21
TSEN54-210ENST00000583634 CCNT1O60563 726 aaKnown RBP13.77□□□□□ -0.21
TSEN54-210ENST00000583634 PPP6R2O75170 966 aa13.77□□□□□ -0.21
TSEN54-210ENST00000583634 PRPF40AO75400 957 aaKnown RBP13.77□□□□□ -0.21
TSEN54-210ENST00000583634 SNAI1O95863 264 aaPredicted RBP13.77□□□□□ -0.21
TSEN54-210ENST00000583634 ACLYP53396 1101 aa13.77□□□□□ -0.21
TSEN54-210ENST00000583634 ARHGAP4P98171 946 aa13.77□□□□□ -0.21
TSEN54-210ENST00000583634 FPGSQ05932 587 aa13.77□□□□□ -0.21
TSEN54-210ENST00000583634 GRIN2CQ14957 1233 aa13.77□□□□□ -0.21
TSEN54-210ENST00000583634 PTPAQ15257 358 aa13.77□□□□□ -0.21
TSEN54-210ENST00000583634 NFKBIBQ15653 356 aa13.77□□□□□ -0.21
TSEN54-210ENST00000583634 ZNF174Q15697 407 aa13.77□□□□□ -0.21
TSEN54-210ENST00000583634 KCNA10Q16322 511 aa13.77□□□□□ -0.21
TSEN54-210ENST00000583634 PPP4R3AQ6IN85 833 aa13.77□□□□□ -0.21
TSEN54-210ENST00000583634 CRYGNQ8WXF5 182 aa13.77□□□□□ -0.21
TSEN54-210ENST00000583634 STARD7Q9NQZ5 370 aa13.77□□□□□ -0.21
TSEN54-210ENST00000583634 ZHX1Q9UKY1 873 aaPredicted RBP13.77□□□□□ -0.21
TSEN54-210ENST00000583634 SYNRGQ9UMZ2 1314 aa13.77□□□□□ -0.21
TSEN54-210ENST00000583634 CYP3A7-CYP3A51PA0A087WV96 503 aa13.76□□□□□ -0.21
TSEN54-210ENST00000583634 GOLGA6L4A6NEF3 574 aa13.76□□□□□ -0.21
TSEN54-210ENST00000583634 B4DLN1 442 aa13.76□□□□□ -0.21
TSEN54-210ENST00000583634 CYP3A7P24462 503 aa13.76□□□□□ -0.21
TSEN54-210ENST00000583634 CIITAP33076 1130 aa13.76□□□□□ -0.21
TSEN54-210ENST00000583634 MCM7P33993 719 aa13.76□□□□□ -0.21
TSEN54-210ENST00000583634 ZNF76P36508 570 aa13.76□□□□□ -0.21
TSEN54-210ENST00000583634 NBR1Q14596 966 aa13.76□□□□□ -0.21
TSEN54-210ENST00000583634 ARHGEF16Q5VV41 709 aa13.76□□□□□ -0.21
TSEN54-210ENST00000583634 CCSAPQ6IQ19 270 aaPredicted RBP13.76□□□□□ -0.21
TSEN54-210ENST00000583634 XRRA1Q6P2D8 792 aa13.76□□□□□ -0.21
TSEN54-210ENST00000583634 SLC30A10Q6XR72 485 aa13.76□□□□□ -0.21
TSEN54-210ENST00000583634 ANKRD33Q7Z3H0 272 aa13.76□□□□□ -0.21
TSEN54-210ENST00000583634 KLHDC9Q8NEP7 349 aa13.76□□□□□ -0.21
TSEN54-210ENST00000583634 DNERQ8NFT8 737 aa13.76□□□□□ -0.21
TSEN54-210ENST00000583634 TAAR1Q96RJ0 339 aa13.76□□□□□ -0.21
TSEN54-210ENST00000583634 RMDN3Q96TC7 470 aa13.76□□□□□ -0.21
TSEN54-210ENST00000583634 TSEN34Q9BSV6 310 aaKnown RBP13.76□□□□□ -0.21
TSEN54-210ENST00000583634 FTOQ9C0B1 505 aaKnown RBP eCLIP13.76□□□□□ -0.21
TSEN54-210ENST00000583634 GDPD2Q9HCC8 539 aa13.76□□□□□ -0.21
TSEN54-210ENST00000583634 FAM184BQ9ULE4 1060 aa13.76□□□□□ -0.21
TSEN54-210ENST00000583634 PRUNE2Q8WUY3 3088 aa13.76□□□□□ -0.21
TSEN54-210ENST00000583634 VCANP13611 3396 aa13.75□□□□□ -0.21
TSEN54-210ENST00000583634 FRMPD4Q14CM0 1322 aa13.75□□□□□ -0.21
TSEN54-210ENST00000583634 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.75□□□□□ -0.21
TSEN54-210ENST00000583634 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.75□□□□□ -0.21
TSEN54-210ENST00000583634 DCDC2CA8MYV0 355 aa13.75□□□□□ -0.21
TSEN54-210ENST00000583634 ADCY6O43306 1168 aa13.75□□□□□ -0.21
TSEN54-210ENST00000583634 ATP2C1P98194 919 aaPredicted RBP13.75□□□□□ -0.21
TSEN54-210ENST00000583634 PTGDRQ13258 359 aa13.75□□□□□ -0.21
TSEN54-210ENST00000583634 ARL6IP4Q66PJ3 421 aaKnown RBP13.75□□□□□ -0.21
TSEN54-210ENST00000583634 USP38Q8NB14 1042 aa13.75□□□□□ -0.21
TSEN54-210ENST00000583634 NSUN6Q8TEA1 469 aaKnown RBP13.75□□□□□ -0.21
TSEN54-210ENST00000583634 TOX2Q96NM4 488 aa13.75□□□□□ -0.21
TSEN54-210ENST00000583634 MPHOSPH6Q99547 160 aaKnown RBP13.75□□□□□ -0.21
TSEN54-210ENST00000583634 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.75□□□□□ -0.213e-6■■□□□ 12.8
TSEN54-210ENST00000583634 PXMP2Q9NR77 195 aa13.75□□□□□ -0.21
TSEN54-210ENST00000583634 LMBRD1Q9NUN5 540 aa13.75□□□□□ -0.21
TSEN54-210ENST00000583634 COL20A1Q9P218 1284 aa13.75□□□□□ -0.21
TSEN54-210ENST00000583634 ADD3Q9UEY8 706 aaKnown RBP13.75□□□□□ -0.21
TSEN54-210ENST00000583634 CDH23Q9H251 3354 aa13.74□□□□□ -0.21
TSEN54-210ENST00000583634 LCTP09848 1927 aa13.74□□□□□ -0.21
TSEN54-210ENST00000583634 DNAJC25-GNG10A0A024R161 153 aa13.74□□□□□ -0.21
TSEN54-210ENST00000583634 TMEM265A0A087WTH1 108 aa13.74□□□□□ -0.21
TSEN54-210ENST00000583634 LOC102724159A0A0B4J2E5 919 aa13.74□□□□□ -0.21
TSEN54-210ENST00000583634 MOXD2PA6NHM9 499 aa13.74□□□□□ -0.21
TSEN54-210ENST00000583634 WNT7AO00755 349 aa13.74□□□□□ -0.21
TSEN54-210ENST00000583634 NEMFO60524 1076 aa13.74□□□□□ -0.21
TSEN54-210ENST00000583634 TIMP1P01033 207 aa13.74□□□□□ -0.21
TSEN54-210ENST00000583634 DNAJB2P25686 324 aa13.74□□□□□ -0.21
TSEN54-210ENST00000583634 PRPHP41219 470 aa13.74□□□□□ -0.21
TSEN54-210ENST00000583634 ME1P48163 572 aa13.74□□□□□ -0.21
TSEN54-210ENST00000583634 UBE2HP62256 183 aa13.74□□□□□ -0.21
TSEN54-210ENST00000583634 PWP2Q15269 919 aaKnown RBP13.74□□□□□ -0.21
TSEN54-210ENST00000583634 Q4G0T1 1027 aa13.74□□□□□ -0.21
TSEN54-210ENST00000583634 PCNX4Q63HM2 1172 aa13.74□□□□□ -0.21
TSEN54-210ENST00000583634 MAMDC4Q6UXC1 1216 aa13.74□□□□□ -0.21
TSEN54-210ENST00000583634 C16orf59Q7L2K0 433 aa13.74□□□□□ -0.21
TSEN54-210ENST00000583634 C4orf32Q8N8J7 132 aa13.74□□□□□ -0.21
TSEN54-210ENST00000583634 KRI1Q8N9T8 703 aaKnown RBP13.74□□□□□ -0.21
TSEN54-210ENST00000583634 MBOAT7Q96N66 472 aa13.74□□□□□ -0.21
TSEN54-210ENST00000583634 IWS1Q96ST2 819 aa13.74□□□□□ -0.21
TSEN54-210ENST00000583634 DDX25Q9UHL0 483 aaKnown RBP13.74□□□□□ -0.21
TSEN54-210ENST00000583634 SRPRBQ9Y5M8 271 aaKnown RBP13.74□□□□□ -0.21
TSEN54-210ENST00000583634 MCM3APO60318 1980 aa13.74□□□□□ -0.21
TSEN54-210ENST00000583634 SYNGAP1Q96PV0 1343 aa13.73□□□□□ -0.21
TSEN54-210ENST00000583634 GRXCR1A8MXD5 290 aa13.73□□□□□ -0.21
TSEN54-210ENST00000583634 EDIL3O43854 480 aa13.73□□□□□ -0.21
TSEN54-210ENST00000583634 CUTAO60888 179 aa13.73□□□□□ -0.21
TSEN54-210ENST00000583634 DUSP11O75319 330 aaKnown RBP13.73□□□□□ -0.21
TSEN54-210ENST00000583634 TDP2O95551 362 aa13.73□□□□□ -0.21
TSEN54-210ENST00000583634 C6orf222P0C671 652 aaPredicted RBP13.73□□□□□ -0.21
TSEN54-210ENST00000583634 MARCKSP29966 332 aaPredicted RBP13.73□□□□□ -0.21
TSEN54-210ENST00000583634 CCND2P30279 289 aa13.73□□□□□ -0.21
TSEN54-210ENST00000583634 ACVR2BQ13705 512 aa13.73□□□□□ -0.21
TSEN54-210ENST00000583634 PGM5Q15124 567 aa13.73□□□□□ -0.21
TSEN54-210ENST00000583634 CALCRLQ16602 461 aa13.73□□□□□ -0.21
TSEN54-210ENST00000583634 SKOR2Q2VWA4 1001 aaPredicted RBP13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms