RNA–Protein interactions for RNA: ENST00000582114.5

CDK5RAP3-223, Transcript of CDK5 regulatory subunit associated protein 3, human

TSL 2

Gene CDK5RAP3, Length 647 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK5RAP3-223	ENST00000582114	TGFB3	P10600	412 aa		13.43	□□□□□ -0.26
CDK5RAP3-223	ENST00000582114	KCNQ1	P51787	676 aa		13.43	□□□□□ -0.26
CDK5RAP3-223	ENST00000582114	SEMA3F	Q13275	785 aa		13.43	□□□□□ -0.26
CDK5RAP3-223	ENST00000582114	CASC1	Q6TDU7	716 aa		13.43	□□□□□ -0.26
CDK5RAP3-223	ENST00000582114	LIN28B	Q6ZN17	250 aa	Known RBP eCLIP	13.43	□□□□□ -0.26
CDK5RAP3-223	ENST00000582114	NFXL1	Q6ZNB6	911 aa		13.43	□□□□□ -0.26
CDK5RAP3-223	ENST00000582114	TRIM50	Q86XT4	487 aa		13.43	□□□□□ -0.26
CDK5RAP3-223	ENST00000582114	CTCFL	Q8NI51	663 aa	Predicted RBP	13.43	□□□□□ -0.26
CDK5RAP3-223	ENST00000582114	SMARCC2	Q8TAQ2	1214 aa		13.43	□□□□□ -0.26
CDK5RAP3-223	ENST00000582114	ATP6V0A1	Q93050	837 aa		13.43	□□□□□ -0.26
CDK5RAP3-223	ENST00000582114	TUT1	Q9H6E5	874 aa	Known RBP	13.43	□□□□□ -0.26
CDK5RAP3-223	ENST00000582114	TRANK1	O15050	2925 aa		13.43	□□□□□ -0.26
CDK5RAP3-223	ENST00000582114	ABHD14A-ACY1	A0A1B0GW23	586 aa		13.42	□□□□□ -0.26
CDK5RAP3-223	ENST00000582114	hCG_1642624	A0A1W2PR95	340 aa		13.42	□□□□□ -0.26
CDK5RAP3-223	ENST00000582114	RSPH10B2	B2RC85	870 aa		13.42	□□□□□ -0.26
CDK5RAP3-223	ENST00000582114	TREH	O43280	583 aa		13.42	□□□□□ -0.26
CDK5RAP3-223	ENST00000582114	LGR5	O75473	907 aa		13.42	□□□□□ -0.26
CDK5RAP3-223	ENST00000582114	PARN	O95453	639 aa	Known RBP	13.42	□□□□□ -0.26
CDK5RAP3-223	ENST00000582114	RSPH10B	P0C881	870 aa		13.42	□□□□□ -0.26
CDK5RAP3-223	ENST00000582114	IKBKE	Q14164	716 aa		13.42	□□□□□ -0.26
CDK5RAP3-223	ENST00000582114	GNPTAB	Q3T906	1256 aa		13.42	□□□□□ -0.26
CDK5RAP3-223	ENST00000582114	UTP14C	Q5TAP6	766 aa	Known RBP	13.42	□□□□□ -0.26
CDK5RAP3-223	ENST00000582114	SERINC5	Q86VE9	423 aa		13.42	□□□□□ -0.26
CDK5RAP3-223	ENST00000582114	SRBD1	Q8N5C6	995 aa	Known RBP	13.42	□□□□□ -0.26
CDK5RAP3-223	ENST00000582114	RRP36	Q96EU6	259 aa	Known RBP	13.42	□□□□□ -0.26
CDK5RAP3-223	ENST00000582114	INPP4A	Q96PE3	977 aa	Predicted RBP	13.42	□□□□□ -0.26
CDK5RAP3-223	ENST00000582114	LRRC2	Q9BYS8	371 aa		13.42	□□□□□ -0.26
CDK5RAP3-223	ENST00000582114	OSBPL7	Q9BZF2	842 aa		13.42	□□□□□ -0.26
CDK5RAP3-223	ENST00000582114	SEC63	Q9UGP8	760 aa	Known RBP	13.42	□□□□□ -0.26
CDK5RAP3-223	ENST00000582114	FRMPD4	Q14CM0	1322 aa		13.41	□□□□□ -0.26
CDK5RAP3-223	ENST00000582114	CCDC69	A6NI79	296 aa		13.41	□□□□□ -0.26
CDK5RAP3-223	ENST00000582114	SPATA31C2	B4DYI2	1134 aa		13.41	□□□□□ -0.26
CDK5RAP3-223	ENST00000582114	LPXN	O60711	386 aa		13.41	□□□□□ -0.26
CDK5RAP3-223	ENST00000582114	DDAH1	O94760	285 aa		13.41	□□□□□ -0.26
CDK5RAP3-223	ENST00000582114	GJB5	O95377	273 aa		13.41	□□□□□ -0.26
CDK5RAP3-223	ENST00000582114	KIF5B	P33176	963 aa		13.41	□□□□□ -0.26
CDK5RAP3-223	ENST00000582114	METTL7B	Q6UX53	244 aa		13.41	□□□□□ -0.26
CDK5RAP3-223	ENST00000582114	SKAP1	Q86WV1	359 aa		13.41	□□□□□ -0.26
CDK5RAP3-223	ENST00000582114	MYOCD	Q8IZQ8	938 aa		13.41	□□□□□ -0.26
CDK5RAP3-223	ENST00000582114	CCDC82	Q8N4S0	544 aa		13.41	□□□□□ -0.26
CDK5RAP3-223	ENST00000582114	DBF4B	Q8NFT6	615 aa		13.41	□□□□□ -0.26
CDK5RAP3-223	ENST00000582114	CUL5	Q93034	780 aa		13.41	□□□□□ -0.26
CDK5RAP3-223	ENST00000582114	RAD9A	Q99638	391 aa		13.41	□□□□□ -0.26
CDK5RAP3-223	ENST00000582114	GPR20	Q99678	358 aa		13.41	□□□□□ -0.26
CDK5RAP3-223	ENST00000582114	SPZ1	Q9BXG8	430 aa		13.41	□□□□□ -0.26
CDK5RAP3-223	ENST00000582114	LSG1	Q9H089	658 aa	Known RBP	13.41	□□□□□ -0.26
CDK5RAP3-223	ENST00000582114	RNPEP	Q9H4A4	650 aa		13.41	□□□□□ -0.26
CDK5RAP3-223	ENST00000582114	SETD4	Q9NVD3	440 aa		13.41	□□□□□ -0.26
CDK5RAP3-223	ENST00000582114	LINC01553	A4QN01	128 aa		13.4	□□□□□ -0.26
CDK5RAP3-223	ENST00000582114	SH2B2	O14492	632 aa	Predicted RBP	13.4	□□□□□ -0.26
CDK5RAP3-223	ENST00000582114	MEIS2	O14770	477 aa		13.4	□□□□□ -0.26
CDK5RAP3-223	ENST00000582114	SLC27A2	O14975	620 aa		13.4	□□□□□ -0.26
CDK5RAP3-223	ENST00000582114	FIBP	O43427	364 aa		13.4	□□□□□ -0.26
CDK5RAP3-223	ENST00000582114	BMP1	P13497	986 aa		13.4	□□□□□ -0.26
CDK5RAP3-223	ENST00000582114	POU3F3	P20264	500 aa	Predicted RBP	13.4	□□□□□ -0.26
CDK5RAP3-223	ENST00000582114	ICAM3	P32942	547 aa		13.4	□□□□□ -0.26
CDK5RAP3-223	ENST00000582114	NEDD9	Q14511	834 aa		13.4	□□□□□ -0.26
CDK5RAP3-223	ENST00000582114	UBE2S	Q16763	222 aa		13.4	□□□□□ -0.26
CDK5RAP3-223	ENST00000582114	PKD2L1	Q9P0L9	805 aa		13.4	□□□□□ -0.26
CDK5RAP3-223	ENST00000582114	EFCAB14	O75071	495 aa		13.39	□□□□□ -0.27
CDK5RAP3-223	ENST00000582114	STAM2	O75886	525 aa		13.39	□□□□□ -0.27
CDK5RAP3-223	ENST00000582114	MCM5	P33992	734 aa		13.39	□□□□□ -0.27
CDK5RAP3-223	ENST00000582114	ARHGAP4	P98171	946 aa		13.39	□□□□□ -0.27
CDK5RAP3-223	ENST00000582114	PCNX4	Q63HM2	1172 aa		13.39	□□□□□ -0.27
CDK5RAP3-223	ENST00000582114	TGS1	Q96RS0	853 aa	Known RBP	13.39	□□□□□ -0.27
CDK5RAP3-223	ENST00000582114	MAP3K14	Q99558	947 aa		13.39	□□□□□ -0.27
CDK5RAP3-223	ENST00000582114	USP26	Q9BXU7	913 aa		13.39	□□□□□ -0.27
CDK5RAP3-223	ENST00000582114	SUGCT	Q9HAC7	445 aa		13.39	□□□□□ -0.27
CDK5RAP3-223	ENST00000582114	ANO2	Q9NQ90	1003 aa		13.39	□□□□□ -0.27
CDK5RAP3-223	ENST00000582114	RAPGEFL1	Q9UHV5	662 aa		13.39	□□□□□ -0.27
CDK5RAP3-223	ENST00000582114	MICAL3	Q7RTP6	2002 aa		13.39	□□□□□ -0.27
CDK5RAP3-223	ENST00000582114	EMSY	Q7Z589	1322 aa		13.39	□□□□□ -0.27
CDK5RAP3-223	ENST00000582114	ATP9A	O75110	1047 aa		13.38	□□□□□ -0.27
CDK5RAP3-223	ENST00000582114	UPP2	O95045	317 aa		13.38	□□□□□ -0.27
CDK5RAP3-223	ENST00000582114	AMH	P03971	560 aa		13.38	□□□□□ -0.27
CDK5RAP3-223	ENST00000582114	MARK3	P27448	753 aa		13.38	□□□□□ -0.27
CDK5RAP3-223	ENST00000582114	HOXC8	P31273	242 aa		13.38	□□□□□ -0.27
CDK5RAP3-223	ENST00000582114	AAK1	Q2M2I8	961 aa		13.38	□□□□□ -0.27
CDK5RAP3-223	ENST00000582114	PLEKHG4	Q58EX7	1191 aa		13.38	□□□□□ -0.27
CDK5RAP3-223	ENST00000582114	CREB3L3	Q68CJ9	461 aa		13.38	□□□□□ -0.27
CDK5RAP3-223	ENST00000582114	NLRX1	Q86UT6	975 aa		13.38	□□□□□ -0.27
CDK5RAP3-223	ENST00000582114	MICU3	Q86XE3	530 aa		13.38	□□□□□ -0.27
CDK5RAP3-223	ENST00000582114	HLA-C	Q95604	372 aa		13.38	□□□□□ -0.27
CDK5RAP3-223	ENST00000582114	LZTS2	Q9BRK4	669 aa		13.38	□□□□□ -0.27
CDK5RAP3-223	ENST00000582114	C17orf80	Q9BSJ5	609 aa		13.38	□□□□□ -0.27
CDK5RAP3-223	ENST00000582114	ESYT1	Q9BSJ8	1104 aa		13.38	□□□□□ -0.27
CDK5RAP3-223	ENST00000582114	PSTPIP2	Q9H939	334 aa		13.38	□□□□□ -0.27
CDK5RAP3-223	ENST00000582114	ZNF215	Q9UL58	517 aa	Predicted RBP	13.38	□□□□□ -0.27
CDK5RAP3-223	ENST00000582114	PIK3CD	O00329	1044 aa		13.37	□□□□□ -0.27
CDK5RAP3-223	ENST00000582114	GNAT1	P11488	350 aa		13.37	□□□□□ -0.27
CDK5RAP3-223	ENST00000582114	GNAQ	P50148	359 aa		13.37	□□□□□ -0.27
CDK5RAP3-223	ENST00000582114	ERVK-21	P61565	698 aa		13.37	□□□□□ -0.27
CDK5RAP3-223	ENST00000582114	RUFY4	Q6ZNE9	571 aa		13.37	□□□□□ -0.27
CDK5RAP3-223	ENST00000582114	HEATR3	Q7Z4Q2	680 aa		13.37	□□□□□ -0.27
CDK5RAP3-223	ENST00000582114	LMBR1	Q8WVP7	490 aa		13.37	□□□□□ -0.27
CDK5RAP3-223	ENST00000582114	SEPT8	Q92599	483 aa		13.37	□□□□□ -0.27
CDK5RAP3-223	ENST00000582114	TMEM87B	Q96K49	555 aa		13.37	□□□□□ -0.27
CDK5RAP3-223	ENST00000582114	COG5	Q9UP83	839 aa		13.37	□□□□□ -0.27
CDK5RAP3-223	ENST00000582114	INSL6	Q9Y581	213 aa		13.37	□□□□□ -0.27
CDK5RAP3-223	ENST00000582114	SLC12A7	Q9Y666	1083 aa		13.37	□□□□□ -0.27

Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms