RNA–Protein interactions for RNA: ENST00000581711.1

SMCHD1-207, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 4

Gene SMCHD1, Length 546 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-207ENST00000581711 KCNAB2Q13303 367 aa7.36□□□□□ -1.23
SMCHD1-207ENST00000581711 SMN1Q16637 294 aaKnown RBP7.36□□□□□ -1.23
SMCHD1-207ENST00000581711 IGFL4Q6B9Z1 124 aa7.36□□□□□ -1.23
SMCHD1-207ENST00000581711 TCTN3Q6NUS6 607 aa7.36□□□□□ -1.23
SMCHD1-207ENST00000581711 RALYLQ86SE5 291 aaKnown RBP7.36□□□□□ -1.23
SMCHD1-207ENST00000581711 PPP1R14AQ96A00 147 aa7.36□□□□□ -1.23
SMCHD1-207ENST00000581711 ZNF503Q96F45 646 aa7.36□□□□□ -1.23
SMCHD1-207ENST00000581711 RBPJLQ9UBG7 517 aa7.36□□□□□ -1.23
SMCHD1-207ENST00000581711 WDR33Q9C0J8 1336 aaKnown RBP7.35□□□□□ -1.23
SMCHD1-207ENST00000581711 SCAMP3O14828 347 aaKnown RBP7.35□□□□□ -1.23
SMCHD1-207ENST00000581711 MEFVO15553 781 aaPredicted RBP7.35□□□□□ -1.23
SMCHD1-207ENST00000581711 KLHL18O94889 574 aa7.35□□□□□ -1.23
SMCHD1-207ENST00000581711 ABHD18Q0P651 414 aa7.35□□□□□ -1.23
SMCHD1-207ENST00000581711 METTL16Q86W50 562 aaKnown RBP7.35□□□□□ -1.23
SMCHD1-207ENST00000581711 SHDQ96IW2 340 aa7.35□□□□□ -1.23
SMCHD1-207ENST00000581711 ADOQ96SZ5 270 aa7.35□□□□□ -1.23
SMCHD1-207ENST00000581711 H7BY64 318 aa7.34□□□□□ -1.23
SMCHD1-207ENST00000581711 INHBEP58166 350 aa7.34□□□□□ -1.23
SMCHD1-207ENST00000581711 NRN1LQ496H8 165 aa7.34□□□□□ -1.23
SMCHD1-207ENST00000581711 RCBTB1Q8NDN9 531 aa7.34□□□□□ -1.23
SMCHD1-207ENST00000581711 BTN2A2Q8WVV5 523 aa7.34□□□□□ -1.23
SMCHD1-207ENST00000581711 CHFRQ96EP1 664 aa7.34□□□□□ -1.23
SMCHD1-207ENST00000581711 LMF1Q96S06 567 aa7.34□□□□□ -1.23
SMCHD1-207ENST00000581711 MYOTQ9UBF9 498 aa7.34□□□□□ -1.23
SMCHD1-207ENST00000581711 SLC4A7Q9Y6M7 1214 aa7.34□□□□□ -1.23
SMCHD1-207ENST00000581711 ZNF202O95125 648 aa7.33□□□□□ -1.24
SMCHD1-207ENST00000581711 PHF19Q5T6S3 580 aa7.33□□□□□ -1.24
SMCHD1-207ENST00000581711 Q6ZUG5 572 aa7.33□□□□□ -1.24
SMCHD1-207ENST00000581711 PPIL4Q8WUA2 492 aaKnown RBP eCLIP7.33□□□□□ -1.24
SMCHD1-207ENST00000581711 LRRC37BQ96QE4 947 aa7.33□□□□□ -1.24
SMCHD1-207ENST00000581711 HSPBP1Q9NZL4 362 aa7.33□□□□□ -1.24
SMCHD1-207ENST00000581711 PCDHA2Q9Y5H9 948 aa7.33□□□□□ -1.24
SMCHD1-207ENST00000581711 TBX1O43435 398 aa7.32□□□□□ -1.24
SMCHD1-207ENST00000581711 DGKIO75912 1065 aa7.32□□□□□ -1.24
SMCHD1-207ENST00000581711 ECI1P42126 302 aa7.32□□□□□ -1.24
SMCHD1-207ENST00000581711 PURAQ00577 322 aaKnown RBP7.32□□□□□ -1.24
SMCHD1-207ENST00000581711 LSAMPQ13449 338 aa7.32□□□□□ -1.24
SMCHD1-207ENST00000581711 TESK1Q15569 626 aa7.32□□□□□ -1.24
SMCHD1-207ENST00000581711 ACBD5Q5T8D3 534 aaPredicted RBP7.32□□□□□ -1.24
SMCHD1-207ENST00000581711 PROSER1Q86XN7 944 aa7.32□□□□□ -1.24
SMCHD1-207ENST00000581711 ZNF654Q8IZM8 581 aa7.32□□□□□ -1.24
SMCHD1-207ENST00000581711 KREMEN2Q8NCW0 462 aa7.32□□□□□ -1.24
SMCHD1-207ENST00000581711 GIMAP8Q8ND71 665 aaPredicted RBP7.32□□□□□ -1.24
SMCHD1-207ENST00000581711 PHOSPHO1Q8TCT1 267 aa7.32□□□□□ -1.24
SMCHD1-207ENST00000581711 RASGRP4Q8TDF6 673 aa7.32□□□□□ -1.24
SMCHD1-207ENST00000581711 CHAMP1Q96JM3 812 aa7.32□□□□□ -1.24
SMCHD1-207ENST00000581711 EPB41L1Q9H4G0 881 aa7.32□□□□□ -1.24
SMCHD1-207ENST00000581711 ZFR2Q9UPR6 939 aaKnown RBP7.32□□□□□ -1.24
SMCHD1-207ENST00000581711 SCG5P05408 212 aa7.31□□□□□ -1.24
SMCHD1-207ENST00000581711 SNRPB2P08579 225 aaKnown RBP7.31□□□□□ -1.24
SMCHD1-207ENST00000581711 HOXC12P31275 282 aa7.31□□□□□ -1.24
SMCHD1-207ENST00000581711 SMAD2Q15796 467 aaKnown RBP7.31□□□□□ -1.24
SMCHD1-207ENST00000581711 USP39Q53GS9 565 aaKnown RBP7.31□□□□□ -1.24
SMCHD1-207ENST00000581711 GPR155Q7Z3F1 870 aa7.31□□□□□ -1.24
SMCHD1-207ENST00000581711 NT5DC4Q86YG4 428 aa7.31□□□□□ -1.24
SMCHD1-207ENST00000581711 DTX3Q8N9I9 347 aa7.31□□□□□ -1.24
SMCHD1-207ENST00000581711 GPRASP2Q96D09 838 aa7.31□□□□□ -1.24
SMCHD1-207ENST00000581711 DLL4Q9NR61 685 aa7.31□□□□□ -1.24
SMCHD1-207ENST00000581711 CLDND1Q9NY35 253 aa7.31□□□□□ -1.24
SMCHD1-207ENST00000581711 LCP1P13796 627 aa7.3□□□□□ -1.24
SMCHD1-207ENST00000581711 CSF2RBP32927 897 aa7.3□□□□□ -1.24
SMCHD1-207ENST00000581711 LTBRP36941 435 aa7.3□□□□□ -1.24
SMCHD1-207ENST00000581711 NCAPHQ15003 741 aa7.3□□□□□ -1.24
SMCHD1-207ENST00000581711 VASNQ6EMK4 673 aa7.3□□□□□ -1.24
SMCHD1-207ENST00000581711 AMER2Q8N7J2 671 aa7.3□□□□□ -1.24
SMCHD1-207ENST00000581711 FAM169BQ8N8A8 192 aa7.3□□□□□ -1.24
SMCHD1-207ENST00000581711 AJUBAQ96IF1 538 aa7.3□□□□□ -1.24
SMCHD1-207ENST00000581711 CEP89Q96ST8 783 aa7.3□□□□□ -1.24
SMCHD1-207ENST00000581711 CSRNP2Q9H175 543 aa7.3□□□□□ -1.24
SMCHD1-207ENST00000581711 SMOC1Q9H4F8 434 aa7.3□□□□□ -1.24
SMCHD1-207ENST00000581711 NARSO43776 548 aaKnown RBP7.29□□□□□ -1.24
SMCHD1-207ENST00000581711 KNG1P01042 644 aa7.29□□□□□ -1.24
SMCHD1-207ENST00000581711 CHGBP05060 677 aa7.29□□□□□ -1.24
SMCHD1-207ENST00000581711 PRSS53Q2L4Q9 553 aa7.29□□□□□ -1.24
SMCHD1-207ENST00000581711 TAX1BP1Q86VP1 789 aa7.29□□□□□ -1.24
SMCHD1-207ENST00000581711 ZNF575Q86XF7 245 aa7.29□□□□□ -1.24
SMCHD1-207ENST00000581711 PPIL6Q8IXY8 311 aa7.29□□□□□ -1.24
SMCHD1-207ENST00000581711 IFNL2Q8IZJ0 200 aa7.29□□□□□ -1.24
SMCHD1-207ENST00000581711 EDAQ92838 391 aa7.29□□□□□ -1.24
SMCHD1-207ENST00000581711 IKZF4Q9H2S9 585 aa7.29□□□□□ -1.24
SMCHD1-207ENST00000581711 ASH2LQ9UBL3 628 aa7.29□□□□□ -1.24
SMCHD1-207ENST00000581711 MAFKO60675 156 aa7.28□□□□□ -1.24
SMCHD1-207ENST00000581711 COMTP21964 271 aa7.28□□□□□ -1.24
SMCHD1-207ENST00000581711 NASPP49321 788 aaPredicted RBP7.28□□□□□ -1.24
SMCHD1-207ENST00000581711 PTH1RQ03431 593 aa7.28□□□□□ -1.24
SMCHD1-207ENST00000581711 DPTQ07507 201 aa7.28□□□□□ -1.24
SMCHD1-207ENST00000581711 TTLL11Q8NHH1 800 aa7.28□□□□□ -1.24
SMCHD1-207ENST00000581711 CPLX3Q8WVH0 158 aa7.28□□□□□ -1.24
SMCHD1-207ENST00000581711 EXTL1Q92935 676 aa7.28□□□□□ -1.24
SMCHD1-207ENST00000581711 TRIM8Q9BZR9 551 aa7.28□□□□□ -1.24
SMCHD1-207ENST00000581711 ITGAVP06756 1048 aa7.27□□□□□ -1.25
SMCHD1-207ENST00000581711 TCF3P15923 654 aa7.27□□□□□ -1.25
SMCHD1-207ENST00000581711 MCM7P33993 719 aa7.27□□□□□ -1.25
SMCHD1-207ENST00000581711 SF1Q15637 639 aaKnown RBP7.27□□□□□ -1.25
SMCHD1-207ENST00000581711 AGBL4Q5VU57 503 aa7.27□□□□□ -1.25
SMCHD1-207ENST00000581711 CYP4F22Q6NT55 531 aa7.27□□□□□ -1.25
SMCHD1-207ENST00000581711 ZNF227Q86WZ6 799 aa7.27□□□□□ -1.25
SMCHD1-207ENST00000581711 NEIL1Q96FI4 390 aaPredicted RBP7.27□□□□□ -1.25
SMCHD1-207ENST00000581711 E9PSI1 815 aa7.26□□□□□ -1.25
SMCHD1-207ENST00000581711 FBXO21O94952 628 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms