RNA–Protein interactions for RNA: ENST00000581265.1

RFFL-209, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 596 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-209ENST00000581265 STAM2O75886 525 aa12.27□□□□□ -0.45
RFFL-209ENST00000581265 HOXC8P31273 242 aa12.27□□□□□ -0.45
RFFL-209ENST00000581265 ICAM3P32942 547 aa12.27□□□□□ -0.45
RFFL-209ENST00000581265 WTAPQ15007 396 aa12.27□□□□□ -0.45
RFFL-209ENST00000581265 SART3Q15020 963 aaKnown RBP12.27□□□□□ -0.45
RFFL-209ENST00000581265 SPRED2Q7Z698 418 aa12.27□□□□□ -0.45
RFFL-209ENST00000581265 TMCO2Q7Z6W1 182 aaPredicted RBP12.27□□□□□ -0.45
RFFL-209ENST00000581265 RALYLQ86SE5 291 aaKnown RBP12.27□□□□□ -0.45
RFFL-209ENST00000581265 FCHSD1Q86WN1 690 aa12.27□□□□□ -0.45
RFFL-209ENST00000581265 IGDCC4Q8TDY8 1250 aa12.27□□□□□ -0.45
RFFL-209ENST00000581265 ZFP91Q96JP5 570 aaPredicted RBP12.27□□□□□ -0.45
RFFL-209ENST00000581265 INPP4AQ96PE3 977 aaPredicted RBP12.27□□□□□ -0.45
RFFL-209ENST00000581265 MAP3K14Q99558 947 aa12.27□□□□□ -0.45
RFFL-209ENST00000581265 TUT1Q9H6E5 874 aaKnown RBP12.27□□□□□ -0.45
RFFL-209ENST00000581265 EMSYQ7Z589 1322 aa12.27□□□□□ -0.45
RFFL-209ENST00000581265 RSPH10B2B2RC85 870 aa12.26□□□□□ -0.45
RFFL-209ENST00000581265 SGSM2O43147 1006 aa12.26□□□□□ -0.45
RFFL-209ENST00000581265 SORBS3O60504 671 aa12.26□□□□□ -0.45
RFFL-209ENST00000581265 RSPH10BP0C881 870 aa12.26□□□□□ -0.45
RFFL-209ENST00000581265 SMARCA1P28370 1054 aa12.26□□□□□ -0.45
RFFL-209ENST00000581265 ERVK-21P61565 698 aa12.26□□□□□ -0.45
RFFL-209ENST00000581265 MRPS9P82933 396 aaKnown RBP12.26□□□□□ -0.45
RFFL-209ENST00000581265 MKRN4PQ13434 485 aaPredicted RBP12.26□□□□□ -0.45
RFFL-209ENST00000581265 NEDD9Q14511 834 aa12.26□□□□□ -0.45
RFFL-209ENST00000581265 GNPTABQ3T906 1256 aa12.26□□□□□ -0.45
RFFL-209ENST00000581265 CATIPQ7Z7H3 387 aa12.26□□□□□ -0.45
RFFL-209ENST00000581265 GPKOWQ92917 476 aaPredicted RBP eCLIP12.26□□□□□ -0.45
RFFL-209ENST00000581265 MAP4K1Q92918 833 aa12.26□□□□□ -0.45
RFFL-209ENST00000581265 USP26Q9BXU7 913 aa12.26□□□□□ -0.45
RFFL-209ENST00000581265 RNPEPQ9H4A4 650 aa12.26□□□□□ -0.45
RFFL-209ENST00000581265 BCAS3Q9H6U6 928 aa12.26□□□□□ -0.45
RFFL-209ENST00000581265 SUGCTQ9HAC7 445 aa12.26□□□□□ -0.45
RFFL-209ENST00000581265 TAF6LQ9Y6J9 622 aa12.26□□□□□ -0.45
RFFL-209ENST00000581265 FRMPD4Q14CM0 1322 aa12.26□□□□□ -0.45
RFFL-209ENST00000581265 BRWD1Q9NSI6 2320 aa12.25□□□□□ -0.45
RFFL-209ENST00000581265 C17orf102A2RUQ5 167 aa12.25□□□□□ -0.45
RFFL-209ENST00000581265 LGALS2P05162 132 aa12.25□□□□□ -0.45
RFFL-209ENST00000581265 THPOP40225 353 aa12.25□□□□□ -0.45
RFFL-209ENST00000581265 ANTXR2P58335 489 aa12.25□□□□□ -0.45
RFFL-209ENST00000581265 METTL7BQ6UX53 244 aa12.25□□□□□ -0.45
RFFL-209ENST00000581265 DBF4BQ8NFT6 615 aa12.25□□□□□ -0.45
RFFL-209ENST00000581265 ATP6V0A1Q93050 837 aa12.25□□□□□ -0.45
RFFL-209ENST00000581265 TGS1Q96RS0 853 aaKnown RBP12.25□□□□□ -0.45
RFFL-209ENST00000581265 MTA3Q9BTC8 594 aa12.25□□□□□ -0.45
RFFL-209ENST00000581265 INSL6Q9Y581 213 aa12.25□□□□□ -0.45
RFFL-209ENST00000581265 LINC01553A4QN01 128 aa12.24□□□□□ -0.45
RFFL-209ENST00000581265 PIK3CDO00329 1044 aa12.24□□□□□ -0.45
RFFL-209ENST00000581265 NOP56O00567 594 aaKnown RBP12.24□□□□□ -0.45
RFFL-209ENST00000581265 TREHO43280 583 aa12.24□□□□□ -0.45
RFFL-209ENST00000581265 FIBPO43427 364 aa12.24□□□□□ -0.45
RFFL-209ENST00000581265 CAND2O75155 1236 aa12.24□□□□□ -0.45
RFFL-209ENST00000581265 SMIM10L2AP0DMW4 78 aa12.24□□□□□ -0.45
RFFL-209ENST00000581265 SMIM10L2BP0DMW5 78 aa12.24□□□□□ -0.45
RFFL-209ENST00000581265 HTRA4P83105 476 aaPredicted RBP12.24□□□□□ -0.45
RFFL-209ENST00000581265 SEMA3FQ13275 785 aa12.24□□□□□ -0.45
RFFL-209ENST00000581265 PTPRSQ13332 1948 aa12.24□□□□□ -0.45
RFFL-209ENST00000581265 PLEKHG4Q58EX7 1191 aa12.24□□□□□ -0.45
RFFL-209ENST00000581265 XRRA1Q6P2D8 792 aa12.24□□□□□ -0.45
RFFL-209ENST00000581265 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.24□□□□□ -0.45
RFFL-209ENST00000581265 FAM178BQ8IXR5 827 aa12.24□□□□□ -0.45
RFFL-209ENST00000581265 MB21D2Q8IYB1 491 aaPredicted RBP12.24□□□□□ -0.45
RFFL-209ENST00000581265 GPR20Q99678 358 aa12.24□□□□□ -0.45
RFFL-209ENST00000581265 SENP7Q9BQF6 1050 aa12.24□□□□□ -0.45
RFFL-209ENST00000581265 SPZ1Q9BXG8 430 aa12.24□□□□□ -0.45
RFFL-209ENST00000581265 UBE2ZQ9H832 354 aaPredicted RBP12.24□□□□□ -0.45
RFFL-209ENST00000581265 RTEL1Q9NZ71 1219 aa12.24□□□□□ -0.45
RFFL-209ENST00000581265 SUPT16HQ9Y5B9 1047 aaKnown RBP12.24□□□□□ -0.45
RFFL-209ENST00000581265 MEIS2O14770 477 aa12.23□□□□□ -0.45
RFFL-209ENST00000581265 DCXO43602 365 aa12.23□□□□□ -0.45
RFFL-209ENST00000581265 ST18O60284 1047 aa12.23□□□□□ -0.45
RFFL-209ENST00000581265 AMHP03971 560 aa12.23□□□□□ -0.45
RFFL-209ENST00000581265 GNAT1P11488 350 aa12.23□□□□□ -0.45
RFFL-209ENST00000581265 KIF5BP33176 963 aa12.23□□□□□ -0.45
RFFL-209ENST00000581265 ADAM17P78536 824 aa12.23□□□□□ -0.45
RFFL-209ENST00000581265 PCNX4Q63HM2 1172 aa12.23□□□□□ -0.45
RFFL-209ENST00000581265 USP17L6PQ6QN14 398 aa12.23□□□□□ -0.45
RFFL-209ENST00000581265 CYFIP1Q7L576 1253 aa12.23□□□□□ -0.45
RFFL-209ENST00000581265 TMTC2Q8N394 836 aa12.23□□□□□ -0.45
RFFL-209ENST00000581265 RRP36Q96EU6 259 aaKnown RBP12.23□□□□□ -0.45
RFFL-209ENST00000581265 LZTS2Q9BRK4 669 aa12.23□□□□□ -0.45
RFFL-209ENST00000581265 LY9Q9HBG7 655 aa12.23□□□□□ -0.45
RFFL-209ENST00000581265 SETD4Q9NVD3 440 aa12.23□□□□□ -0.45
RFFL-209ENST00000581265 REV3LO60673 3130 aa12.22□□□□□ -0.45
RFFL-209ENST00000581265 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.22□□□□□ -0.45
RFFL-209ENST00000581265 DDAH1O94760 285 aa12.22□□□□□ -0.45
RFFL-209ENST00000581265 KCNA5P22460 613 aa12.22□□□□□ -0.45
RFFL-209ENST00000581265 PTCRAQ6ISU1 281 aaPredicted RBP12.22□□□□□ -0.45
RFFL-209ENST00000581265 FAM117BQ6P1L5 589 aa12.22□□□□□ -0.45
RFFL-209ENST00000581265 ZNF654Q8IZM8 581 aa12.22□□□□□ -0.45
RFFL-209ENST00000581265 GIMAP8Q8ND71 665 aaPredicted RBP12.22□□□□□ -0.45
RFFL-209ENST00000581265 CTCFLQ8NI51 663 aaPredicted RBP12.22□□□□□ -0.45
RFFL-209ENST00000581265 SMARCC2Q8TAQ2 1214 aa12.22□□□□□ -0.45
RFFL-209ENST00000581265 SP7Q8TDD2 431 aaPredicted RBP12.22□□□□□ -0.45
RFFL-209ENST00000581265 GDPD5Q8WTR4 605 aa12.22□□□□□ -0.45
RFFL-209ENST00000581265 PIBF1Q8WXW3 757 aa12.22□□□□□ -0.45
RFFL-209ENST00000581265 SEPT8Q92599 483 aa12.22□□□□□ -0.45
RFFL-209ENST00000581265 CUL5Q93034 780 aa12.22□□□□□ -0.45
RFFL-209ENST00000581265 TOP1MTQ969P6 601 aa12.22□□□□□ -0.45
RFFL-209ENST00000581265 MFSD14AQ96MC6 490 aa12.22□□□□□ -0.45
RFFL-209ENST00000581265 MTUS1Q9ULD2 1270 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms