RNA–Protein interactions for RNA: ENST00000580158.1

KPNB1-209, Transcript of karyopherin subunit beta 1, human

TSL 2

Gene KPNB1, Length 603 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KPNB1-209	ENST00000580158	CHD8	Q9HCK8	2581 aa		7.25	□□□□□ -1.25
KPNB1-209	ENST00000580158	ASB14	A6NK59	587 aa		7.24	□□□□□ -1.25
KPNB1-209	ENST00000580158	SPINT1	O43278	529 aa		7.24	□□□□□ -1.25
KPNB1-209	ENST00000580158	IGSF3	O75054	1194 aa		7.24	□□□□□ -1.25
KPNB1-209	ENST00000580158	EYA4	O95677	639 aa		7.24	□□□□□ -1.25
KPNB1-209	ENST00000580158	PDGFB	P01127	241 aa	Predicted RBP	7.24	□□□□□ -1.25
KPNB1-209	ENST00000580158	AMH	P03971	560 aa		7.24	□□□□□ -1.25
KPNB1-209	ENST00000580158	POLR3D	P05423	398 aa	Predicted RBP	7.24	□□□□□ -1.25
KPNB1-209	ENST00000580158	MYL3	P08590	195 aa		7.24	□□□□□ -1.25
KPNB1-209	ENST00000580158	UQCRFS1P1	P0C7P4	283 aa		7.24	□□□□□ -1.25
KPNB1-209	ENST00000580158	SHMT1	P34896	483 aa		7.24	□□□□□ -1.25
KPNB1-209	ENST00000580158	CPT1A	P50416	773 aa		7.24	□□□□□ -1.25
KPNB1-209	ENST00000580158	PTPN11	Q06124	597 aa	Predicted RBP	7.24	□□□□□ -1.25
KPNB1-209	ENST00000580158	HYAL1	Q12794	435 aa		7.24	□□□□□ -1.25
KPNB1-209	ENST00000580158	PTPN21	Q16825	1174 aa		7.24	□□□□□ -1.25
KPNB1-209	ENST00000580158	BRDT	Q58F21	947 aa	Predicted RBP	7.24	□□□□□ -1.25
KPNB1-209	ENST00000580158	KIAA1755	Q5JYT7	1200 aa		7.24	□□□□□ -1.25
KPNB1-209	ENST00000580158	NFRKB	Q6P4R8	1299 aa		7.24	□□□□□ -1.25
KPNB1-209	ENST00000580158	PI16	Q6UXB8	463 aa		7.24	□□□□□ -1.25
KPNB1-209	ENST00000580158	TMEM192	Q8IY95	271 aa		7.24	□□□□□ -1.25
KPNB1-209	ENST00000580158	TMEM151A	Q8N4L1	468 aa		7.24	□□□□□ -1.25
KPNB1-209	ENST00000580158	NANOS1	Q8WY41	292 aa	Known RBP	7.24	□□□□□ -1.25
KPNB1-209	ENST00000580158	HAUS7	Q99871	368 aa		7.24	□□□□□ -1.25
KPNB1-209	ENST00000580158	MTG1	Q9BT17	334 aa	Predicted RBP	7.24	□□□□□ -1.25
KPNB1-209	ENST00000580158	PHF7	Q9BWX1	381 aa	Predicted RBP	7.24	□□□□□ -1.25
KPNB1-209	ENST00000580158	FBXO40	Q9UH90	709 aa		7.24	□□□□□ -1.25
KPNB1-209	ENST00000580158	MYH7B	A7E2Y1	1941 aa		7.24	□□□□□ -1.25
KPNB1-209	ENST00000580158	IL16	Q14005	1332 aa		7.24	□□□□□ -1.25
KPNB1-209	ENST00000580158	RAD21	O60216	631 aa		7.23	□□□□□ -1.25
KPNB1-209	ENST00000580158	TBX10	O75333	385 aa		7.23	□□□□□ -1.25
KPNB1-209	ENST00000580158	SELP	P16109	830 aa		7.23	□□□□□ -1.25
KPNB1-209	ENST00000580158	ARID4A	P29374	1257 aa	Predicted RBP	7.23	□□□□□ -1.25
KPNB1-209	ENST00000580158	DYNLL1	P63167	89 aa	Known RBP	7.23	□□□□□ -1.25
KPNB1-209	ENST00000580158	PURA	Q00577	322 aa	Known RBP	7.23	□□□□□ -1.25
KPNB1-209	ENST00000580158	ICA1	Q05084	483 aa		7.23	□□□□□ -1.25
KPNB1-209	ENST00000580158	EXOSC9	Q06265	439 aa	Known RBP	7.23	□□□□□ -1.25
KPNB1-209	ENST00000580158	ADAM15	Q13444	863 aa		7.23	□□□□□ -1.25
KPNB1-209	ENST00000580158	RSPO4	Q2I0M5	234 aa	Predicted RBP	7.23	□□□□□ -1.25
KPNB1-209	ENST00000580158	LRRC8D	Q7L1W4	858 aa		7.23	□□□□□ -1.25
KPNB1-209	ENST00000580158	FBXO11	Q86XK2	927 aa		7.23	□□□□□ -1.25
KPNB1-209	ENST00000580158	WWC1	Q8IX03	1113 aa		7.23	□□□□□ -1.25
KPNB1-209	ENST00000580158	CPXCR1	Q8N123	301 aa		7.23	□□□□□ -1.25
KPNB1-209	ENST00000580158	KCTD17	Q8N5Z5	321 aa		7.23	□□□□□ -1.25
KPNB1-209	ENST00000580158	TMEM105	Q8N8V8	129 aa		7.23	□□□□□ -1.25
KPNB1-209	ENST00000580158	YME1L1	Q96TA2	773 aa		7.23	□□□□□ -1.25
KPNB1-209	ENST00000580158	KATNBL1	Q9H079	304 aa		7.23	□□□□□ -1.25
KPNB1-209	ENST00000580158	USP44	Q9H0E7	712 aa		7.23	□□□□□ -1.25
KPNB1-209	ENST00000580158	MFSD1	Q9H3U5	465 aa		7.23	□□□□□ -1.25
KPNB1-209	ENST00000580158	GOPC	Q9HD26	462 aa		7.23	□□□□□ -1.25
KPNB1-209	ENST00000580158	FBXO28	Q9NVF7	368 aa		7.23	□□□□□ -1.25
KPNB1-209	ENST00000580158	FKBPL	Q9UIM3	349 aa		7.23	□□□□□ -1.25
KPNB1-209	ENST00000580158	RALY	Q9UKM9	306 aa	Known RBP	7.23	□□□□□ -1.25
KPNB1-209	ENST00000580158	HDAC5	Q9UQL6	1122 aa		7.23	□□□□□ -1.25
KPNB1-209	ENST00000580158	PCDHGC5	Q9Y5F6	944 aa		7.23	□□□□□ -1.25
KPNB1-209	ENST00000580158	EP300	Q09472	2414 aa	Predicted RBP	7.23	□□□□□ -1.25
KPNB1-209	ENST00000580158	DNAH14	Q0VDD8	3507 aa		7.23	□□□□□ -1.25
KPNB1-209	ENST00000580158	FANCI	Q9NVI1	1328 aa		7.23	□□□□□ -1.25
KPNB1-209	ENST00000580158	NCOR2	Q9Y618	2525 aa		7.23	□□□□□ -1.25
KPNB1-209	ENST00000580158	FANCM	Q8IYD8	2048 aa		7.22	□□□□□ -1.25
KPNB1-209	ENST00000580158	USP17L12	C9JPN9	530 aa		7.22	□□□□□ -1.25
KPNB1-209	ENST00000580158	USP17L21	D6R901	530 aa		7.22	□□□□□ -1.25
KPNB1-209	ENST00000580158	RNF225	M0QZC1	329 aa	Predicted RBP	7.22	□□□□□ -1.25
KPNB1-209	ENST00000580158	KPNA6	O60684	536 aa		7.22	□□□□□ -1.25
KPNB1-209	ENST00000580158	ZBED4	O75132	1171 aa		7.22	□□□□□ -1.25
KPNB1-209	ENST00000580158	RB1	P06400	928 aa		7.22	□□□□□ -1.25
KPNB1-209	ENST00000580158	CYP7A1	P22680	504 aa		7.22	□□□□□ -1.25
KPNB1-209	ENST00000580158	PLCD1	P51178	756 aa		7.22	□□□□□ -1.25
KPNB1-209	ENST00000580158	CLCN5	P51795	746 aa		7.22	□□□□□ -1.25
KPNB1-209	ENST00000580158	RRP1	P56182	461 aa	Known RBP	7.22	□□□□□ -1.25
KPNB1-209	ENST00000580158	HTRA4	P83105	476 aa	Predicted RBP	7.22	□□□□□ -1.25
KPNB1-209	ENST00000580158	KRT76	Q01546	638 aa		7.22	□□□□□ -1.25
KPNB1-209	ENST00000580158	PTGIS	Q16647	500 aa		7.22	□□□□□ -1.25
KPNB1-209	ENST00000580158	KIAA1211	Q6ZU35	1233 aa		7.22	□□□□□ -1.25
KPNB1-209	ENST00000580158	ADGRA1	Q86SQ6	560 aa		7.22	□□□□□ -1.25
KPNB1-209	ENST00000580158	UBALD2	Q8IYN6	164 aa		7.22	□□□□□ -1.25
KPNB1-209	ENST00000580158	MYOCD	Q8IZQ8	938 aa		7.22	□□□□□ -1.25
KPNB1-209	ENST00000580158	CHST13	Q8NET6	341 aa		7.22	□□□□□ -1.25
KPNB1-209	ENST00000580158	REPS2	Q8NFH8	660 aa		7.22	□□□□□ -1.25
KPNB1-209	ENST00000580158	MSLNL	Q96KJ4	702 aa		7.22	□□□□□ -1.25
KPNB1-209	ENST00000580158	SLF1	Q9BQI6	1058 aa		7.22	□□□□□ -1.25
KPNB1-209	ENST00000580158	INCENP	Q9NQS7	918 aa		7.22	□□□□□ -1.25
KPNB1-209	ENST00000580158	PA2G4	Q9UQ80	394 aa	Known RBP	7.22	□□□□□ -1.25
KPNB1-209	ENST00000580158	RWDD3	Q9Y3V2	267 aa		7.22	□□□□□ -1.25
KPNB1-209	ENST00000580158	RIPK3	Q9Y572	518 aa		7.22	□□□□□ -1.25
KPNB1-209	ENST00000580158	CFAP47	Q6ZTR5	3102 aa		7.22	□□□□□ -1.25
KPNB1-209	ENST00000580158	RAD50	Q92878	1312 aa		7.22	□□□□□ -1.25
KPNB1-209	ENST00000580158	ZFHX4	Q86UP3	3567 aa		7.21	□□□□□ -1.25
KPNB1-209	ENST00000580158	FAM208B	Q5VWN6	2430 aa		7.21	□□□□□ -1.25
KPNB1-209	ENST00000580158	MYH4	Q9Y623	1939 aa		7.21	□□□□□ -1.25
KPNB1-209	ENST00000580158	VPS13A	Q96RL7	3174 aa		7.21	□□□□□ -1.25
KPNB1-209	ENST00000580158	CXCL10	P02778	98 aa		7.21	□□□□□ -1.26
KPNB1-209	ENST00000580158	ATF7	P17544	494 aa	Predicted RBP	7.21	□□□□□ -1.26
KPNB1-209	ENST00000580158	CTNNB1	P35222	781 aa		7.21	□□□□□ -1.26
KPNB1-209	ENST00000580158	PTK2	Q05397	1052 aa		7.21	□□□□□ -1.26
KPNB1-209	ENST00000580158	DMWD	Q09019	674 aa		7.21	□□□□□ -1.26
KPNB1-209	ENST00000580158	TFCP2	Q12800	502 aa		7.21	□□□□□ -1.26
KPNB1-209	ENST00000580158	COASY	Q13057	564 aa		7.21	□□□□□ -1.26
KPNB1-209	ENST00000580158	EEPD1	Q7L9B9	569 aa		7.21	□□□□□ -1.26
KPNB1-209	ENST00000580158	PRPF38A	Q8NAV1	312 aa	Known RBP	7.21	□□□□□ -1.26
KPNB1-209	ENST00000580158	SMRP1	Q8NCR6	262 aa		7.21	□□□□□ -1.26

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