RNA–Protein interactions for RNA: ENST00000580127.5

MKS1-209, Transcript of Meckel syndrome, type 1, humanhuman

TSL 5

Gene MKS1, Length 843 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-209ENST00000580127 ICAM3P32942 547 aa20.66■□□□□ 0.9
MKS1-209ENST00000580127 KIF5BP33176 963 aa20.66■□□□□ 0.9
MKS1-209ENST00000580127 PUS10Q3MIT2 529 aaKnown RBP20.66■□□□□ 0.9
MKS1-209ENST00000580127 NLRX1Q86UT6 975 aa20.66■□□□□ 0.9
MKS1-209ENST00000580127 EXOC6Q8TAG9 804 aa20.66■□□□□ 0.9
MKS1-209ENST00000580127 APBB2Q92870 758 aa20.66■□□□□ 0.9
MKS1-209ENST00000580127 RRP36Q96EU6 259 aaKnown RBP20.66■□□□□ 0.9
MKS1-209ENST00000580127 YME1L1Q96TA2 773 aa20.66■□□□□ 0.9
MKS1-209ENST00000580127 LZTS2Q9BRK4 669 aa20.66■□□□□ 0.9
MKS1-209ENST00000580127 RNPEPQ9H4A4 650 aa20.66■□□□□ 0.9
MKS1-209ENST00000580127 HTRA4P83105 476 aaPredicted RBP20.65■□□□□ 0.9
MKS1-209ENST00000580127 MBTPS1Q14703 1052 aa20.65■□□□□ 0.9
MKS1-209ENST00000580127 TMEM31Q5JXX7 168 aa20.65■□□□□ 0.9
MKS1-209ENST00000580127 TTC22Q5TAA0 569 aa20.65■□□□□ 0.9
MKS1-209ENST00000580127 LIN28BQ6ZN17 250 aaKnown RBP eCLIP20.65■□□□□ 0.9
MKS1-209ENST00000580127 CYFIP1Q7L576 1253 aa20.65■□□□□ 0.9
MKS1-209ENST00000580127 TMTC2Q8N394 836 aa20.65■□□□□ 0.9
MKS1-209ENST00000580127 IL31RAQ8NI17 732 aa20.65■□□□□ 0.9
MKS1-209ENST00000580127 CTCFLQ8NI51 663 aaPredicted RBP20.65■□□□□ 0.9
MKS1-209ENST00000580127 MAP3K14Q99558 947 aa20.65■□□□□ 0.9
MKS1-209ENST00000580127 SEC63Q9UGP8 760 aaKnown RBP20.65■□□□□ 0.9
MKS1-209ENST00000580127 HCN4Q9Y3Q4 1203 aa20.65■□□□□ 0.9
MKS1-209ENST00000580127 ARIH1Q9Y4X5 557 aaPredicted RBP20.65■□□□□ 0.9
MKS1-209ENST00000580127 PTPRSQ13332 1948 aa20.65■□□□□ 0.9
MKS1-209ENST00000580127 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP20.64■□□□□ 0.89
MKS1-209ENST00000580127 TREHO43280 583 aa20.64■□□□□ 0.89
MKS1-209ENST00000580127 CYP21A2P08686 494 aa20.64■□□□□ 0.89
MKS1-209ENST00000580127 SMARCA1P28370 1054 aa20.64■□□□□ 0.89
MKS1-209ENST00000580127 GNAQP50148 359 aa20.64■□□□□ 0.89
MKS1-209ENST00000580127 TROAPQ12815 778 aa20.64■□□□□ 0.89
MKS1-209ENST00000580127 WNT8BQ93098 351 aa20.64■□□□□ 0.89
MKS1-209ENST00000580127 ZFP91Q96JP5 570 aaPredicted RBP20.64■□□□□ 0.89
MKS1-209ENST00000580127 CDHR1Q96JP9 859 aa20.64■□□□□ 0.89
MKS1-209ENST00000580127 INPP4AQ96PE3 977 aaPredicted RBP20.64■□□□□ 0.89
MKS1-209ENST00000580127 SENP7Q9BQF6 1050 aa20.64■□□□□ 0.89
MKS1-209ENST00000580127 UBE2ZQ9H832 354 aaPredicted RBP20.64■□□□□ 0.89
MKS1-209ENST00000580127 RTEL1Q9NZ71 1219 aa20.64■□□□□ 0.89
MKS1-209ENST00000580127 MUC3AQ02505 3323 aa20.63■□□□□ 0.89
MKS1-209ENST00000580127 E7EWF7 191 aa20.63■□□□□ 0.89
MKS1-209ENST00000580127 PLA2G5P39877 138 aa20.63■□□□□ 0.89
MKS1-209ENST00000580127 TCTN1Q2MV58 587 aa20.63■□□□□ 0.89
MKS1-209ENST00000580127 PCNX4Q63HM2 1172 aa20.63■□□□□ 0.89
MKS1-209ENST00000580127 SPRED2Q7Z698 418 aa20.63■□□□□ 0.89
MKS1-209ENST00000580127 RSPH3Q86UC2 560 aa20.63■□□□□ 0.89
MKS1-209ENST00000580127 TOP1MTQ969P6 601 aa20.63■□□□□ 0.89
MKS1-209ENST00000580127 MRPL38Q96DV4 380 aaKnown RBP20.63■□□□□ 0.89
MKS1-209ENST00000580127 SETD4Q9NVD3 440 aa20.63■□□□□ 0.89
MKS1-209ENST00000580127 FAM50BQ9Y247 325 aa20.63■□□□□ 0.89
MKS1-209ENST00000580127 SIP14410 1827 aa20.62■□□□□ 0.89
MKS1-209ENST00000580127 NRCAMQ92823 1304 aa20.62■□□□□ 0.89
MKS1-209ENST00000580127 CYTH3O43739 400 aa20.62■□□□□ 0.89
MKS1-209ENST00000580127 UPP2O95045 317 aa20.62■□□□□ 0.89
MKS1-209ENST00000580127 CHMLP26374 656 aa20.62■□□□□ 0.89
MKS1-209ENST00000580127 HOXC8P31273 242 aa20.62■□□□□ 0.89
MKS1-209ENST00000580127 MRPS9P82933 396 aaKnown RBP20.62■□□□□ 0.89
MKS1-209ENST00000580127 HIC1Q14526 733 aa20.62■□□□□ 0.89
MKS1-209ENST00000580127 LEXMQ3ZCV2 418 aa20.62■□□□□ 0.89
MKS1-209ENST00000580127 TIGD5Q53EQ6 642 aa20.62■□□□□ 0.89
MKS1-209ENST00000580127 CASC1Q6TDU7 716 aa20.62■□□□□ 0.89
MKS1-209ENST00000580127 SP7Q8TDD2 431 aaPredicted RBP20.62■□□□□ 0.89
MKS1-209ENST00000580127 PIBF1Q8WXW3 757 aa20.62■□□□□ 0.89
MKS1-209ENST00000580127 GPKOWQ92917 476 aaPredicted RBP eCLIP20.62■□□□□ 0.89
MKS1-209ENST00000580127 GPR20Q99678 358 aa20.62■□□□□ 0.89
MKS1-209ENST00000580127 C17orf80Q9BSJ5 609 aa20.62■□□□□ 0.89
MKS1-209ENST00000580127 LRFN3Q9BTN0 628 aa20.62■□□□□ 0.89
MKS1-209ENST00000580127 EPHX3Q9H6B9 360 aa20.62■□□□□ 0.89
MKS1-209ENST00000580127 MICAL3Q7RTP6 2002 aa20.61■□□□□ 0.89
MKS1-209ENST00000580127 BRWD1Q9NSI6 2320 aa20.61■□□□□ 0.89
MKS1-209ENST00000580127 NCK2O43639 380 aa20.61■□□□□ 0.89
MKS1-209ENST00000580127 KCNA5P22460 613 aa20.61■□□□□ 0.89
MKS1-209ENST00000580127 ARHGAP4P98171 946 aa20.61■□□□□ 0.89
MKS1-209ENST00000580127 GPM6BQ13491 265 aa20.61■□□□□ 0.89
MKS1-209ENST00000580127 EPC2Q52LR7 807 aa20.61■□□□□ 0.89
MKS1-209ENST00000580127 UTP14CQ5TAP6 766 aaKnown RBP20.61■□□□□ 0.89
MKS1-209ENST00000580127 TNPO1Q92973 898 aaKnown RBP20.61■□□□□ 0.89
MKS1-209ENST00000580127 YTHDC1Q96MU7 727 aaKnown RBP20.61■□□□□ 0.89
MKS1-209ENST00000580127 MTA3Q9BTC8 594 aa20.61■□□□□ 0.89
MKS1-209ENST00000580127 SPZ1Q9BXG8 430 aa20.61■□□□□ 0.89
MKS1-209ENST00000580127 IFIH1Q9BYX4 1025 aaKnown RBP20.61■□□□□ 0.89
MKS1-209ENST00000580127 RAPGEFL1Q9UHV5 662 aa20.61■□□□□ 0.89
MKS1-209ENST00000580127 REV3LO60673 3130 aa20.6■□□□□ 0.89
MKS1-209ENST00000580127 FRMPD4Q14CM0 1322 aa20.6■□□□□ 0.89
MKS1-209ENST00000580127 H3BNC9 293 aa20.6■□□□□ 0.89
MKS1-209ENST00000580127 PIK3CDO00329 1044 aa20.6■□□□□ 0.89
MKS1-209ENST00000580127 GPR37L1O60883 481 aa20.6■□□□□ 0.89
MKS1-209ENST00000580127 DDAH1O94760 285 aa20.6■□□□□ 0.89
MKS1-209ENST00000580127 CTSHP09668 335 aa20.6■□□□□ 0.89
MKS1-209ENST00000580127 PTH1RQ03431 593 aa20.6■□□□□ 0.89
MKS1-209ENST00000580127 TAF2Q6P1X5 1199 aa20.6■□□□□ 0.89
MKS1-209ENST00000580127 NFXL1Q6ZNB6 911 aa20.6■□□□□ 0.89
MKS1-209ENST00000580127 TMEM192Q8IY95 271 aa20.6■□□□□ 0.89
MKS1-209ENST00000580127 IGDCC4Q8TDY8 1250 aa20.6■□□□□ 0.89
MKS1-209ENST00000580127 IL17RAQ96F46 866 aa20.6■□□□□ 0.89
MKS1-209ENST00000580127 RPLP2P05387 115 aaKnown RBP20.59■□□□□ 0.89
MKS1-209ENST00000580127 CALM1P0DP23 149 aa20.59■□□□□ 0.89
MKS1-209ENST00000580127 CALM2P0DP24 149 aa20.59■□□□□ 0.89
MKS1-209ENST00000580127 CALM3P0DP25 149 aa20.59■□□□□ 0.89
MKS1-209ENST00000580127 FAM26DQ5JW98 314 aa20.59■□□□□ 0.89
MKS1-209ENST00000580127 BANK1Q8NDB2 785 aa20.59■□□□□ 0.89
MKS1-209ENST00000580127 IL25Q9H293 177 aa20.59■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms