RNA–Protein interactions for RNA: ENST00000579466.1

MSI2-208, Transcript of musashi RNA binding protein 2, human

TSL 3

Gene MSI2, Length 186 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MSI2-208	ENST00000579466	IL25	Q9H293	177 aa		11.16	□□□□□ -0.62
MSI2-208	ENST00000579466	MAD2L2	Q9UI95	211 aa		11.16	□□□□□ -0.62
MSI2-208	ENST00000579466	TELO2	Q9Y4R8	837 aa		11.16	□□□□□ -0.62
MSI2-208	ENST00000579466	SUPT16H	Q9Y5B9	1047 aa	Known RBP	11.16	□□□□□ -0.62
MSI2-208	ENST00000579466	PPAN-P2RY11	A0A0B4J1V8	794 aa	Predicted RBP	11.15	□□□□□ -0.62
MSI2-208	ENST00000579466	PI4K2B	G5E9Z4	385 aa		11.15	□□□□□ -0.62
MSI2-208	ENST00000579466		H3BRB1	525 aa		11.15	□□□□□ -0.62
MSI2-208	ENST00000579466	GCOM1	H8Y6P7	765 aa	Predicted RBP	11.15	□□□□□ -0.62
MSI2-208	ENST00000579466	GPR37L1	O60883	481 aa		11.15	□□□□□ -0.62
MSI2-208	ENST00000579466	POLR2M	P0CAP2	368 aa		11.15	□□□□□ -0.62
MSI2-208	ENST00000579466	HOXD8	P13378	290 aa	Predicted RBP	11.15	□□□□□ -0.62
MSI2-208	ENST00000579466	HTRA4	P83105	476 aa	Predicted RBP	11.15	□□□□□ -0.62
MSI2-208	ENST00000579466	GPM6B	Q13491	265 aa		11.15	□□□□□ -0.62
MSI2-208	ENST00000579466	CLUL1	Q15846	466 aa		11.15	□□□□□ -0.62
MSI2-208	ENST00000579466	PTPRO	Q16827	1216 aa		11.15	□□□□□ -0.62
MSI2-208	ENST00000579466	SLC35G1	Q2M3R5	365 aa		11.15	□□□□□ -0.62
MSI2-208	ENST00000579466	TIGD5	Q53EQ6	642 aa		11.15	□□□□□ -0.62
MSI2-208	ENST00000579466	PLEKHG4	Q58EX7	1191 aa		11.15	□□□□□ -0.62
MSI2-208	ENST00000579466	TCEAL5	Q5H9L2	206 aa		11.15	□□□□□ -0.62
MSI2-208	ENST00000579466	KCNV1	Q6PIU1	500 aa		11.15	□□□□□ -0.62
MSI2-208	ENST00000579466	STOX1	Q6ZVD7	989 aa		11.15	□□□□□ -0.62
MSI2-208	ENST00000579466	VSIG10L	Q86VR7	867 aa		11.15	□□□□□ -0.62
MSI2-208	ENST00000579466	BANK1	Q8NDB2	785 aa		11.15	□□□□□ -0.62
MSI2-208	ENST00000579466	MRPL38	Q96DV4	380 aa	Known RBP	11.15	□□□□□ -0.62
MSI2-208	ENST00000579466	DSCC1	Q9BVC3	393 aa		11.15	□□□□□ -0.62
MSI2-208	ENST00000579466	IFIH1	Q9BYX4	1025 aa	Known RBP	11.15	□□□□□ -0.62
MSI2-208	ENST00000579466	MAF1	Q9H063	256 aa		11.15	□□□□□ -0.62
MSI2-208	ENST00000579466	RNPEP	Q9H4A4	650 aa		11.15	□□□□□ -0.62
MSI2-208	ENST00000579466	TUT1	Q9H6E5	874 aa	Known RBP	11.15	□□□□□ -0.62
MSI2-208	ENST00000579466	CNNM2	Q9H8M5	875 aa		11.15	□□□□□ -0.62
MSI2-208	ENST00000579466	SENP2	Q9HC62	589 aa		11.15	□□□□□ -0.62
MSI2-208	ENST00000579466	SETD4	Q9NVD3	440 aa		11.15	□□□□□ -0.62
MSI2-208	ENST00000579466	RTEL1	Q9NZ71	1219 aa		11.15	□□□□□ -0.62
MSI2-208	ENST00000579466	CTNNA3	Q9UI47	895 aa		11.15	□□□□□ -0.62
MSI2-208	ENST00000579466	LOC101059915	A0A1B0GWI6	518 aa	Predicted RBP	11.14	□□□□□ -0.63
MSI2-208	ENST00000579466	CTNNB1	P35222	781 aa		11.14	□□□□□ -0.63
MSI2-208	ENST00000579466	ARHGAP4	P98171	946 aa		11.14	□□□□□ -0.63
MSI2-208	ENST00000579466	MKRN4P	Q13434	485 aa	Predicted RBP	11.14	□□□□□ -0.63
MSI2-208	ENST00000579466	SEC23A	Q15436	765 aa		11.14	□□□□□ -0.63
MSI2-208	ENST00000579466	CSPP1	Q1MSJ5	1256 aa		11.14	□□□□□ -0.63
MSI2-208	ENST00000579466	GNPTAB	Q3T906	1256 aa		11.14	□□□□□ -0.63
MSI2-208	ENST00000579466	CYFIP1	Q7L576	1253 aa		11.14	□□□□□ -0.63
MSI2-208	ENST00000579466	TICAM2	Q86XR7	235 aa		11.14	□□□□□ -0.63
MSI2-208	ENST00000579466	TMEM192	Q8IY95	271 aa		11.14	□□□□□ -0.63
MSI2-208	ENST00000579466	SP7	Q8TDD2	431 aa	Predicted RBP	11.14	□□□□□ -0.63
MSI2-208	ENST00000579466	CLDND1	Q9NY35	253 aa		11.14	□□□□□ -0.63
MSI2-208	ENST00000579466	KIAA1671	Q9BY89	1806 aa		11.14	□□□□□ -0.63
MSI2-208	ENST00000579466	PALM3	A6NDB9	673 aa	Predicted RBP	11.13	□□□□□ -0.63
MSI2-208	ENST00000579466	GRXCR2	A6NFK2	248 aa		11.13	□□□□□ -0.63
MSI2-208	ENST00000579466	HIP1	O00291	1037 aa		11.13	□□□□□ -0.63
MSI2-208	ENST00000579466	IFIT3	O14879	490 aa	Known RBP	11.13	□□□□□ -0.63
MSI2-208	ENST00000579466	IGHD	P01880	384 aa		11.13	□□□□□ -0.63
MSI2-208	ENST00000579466	GHRHR	Q02643	423 aa		11.13	□□□□□ -0.63
MSI2-208	ENST00000579466	GRM4	Q14833	912 aa		11.13	□□□□□ -0.63
MSI2-208	ENST00000579466	ALYREF	Q86V81	257 aa	Known RBP	11.13	□□□□□ -0.63
MSI2-208	ENST00000579466	SMC5	Q8IY18	1101 aa		11.13	□□□□□ -0.63
MSI2-208	ENST00000579466	MTMR8	Q96EF0	704 aa		11.13	□□□□□ -0.63
MSI2-208	ENST00000579466	RWDD1	Q9H446	243 aa	Predicted RBP	11.13	□□□□□ -0.63
MSI2-208	ENST00000579466	PKD2L1	Q9P0L9	805 aa		11.13	□□□□□ -0.63
MSI2-208	ENST00000579466	PIEZO1	Q92508	2521 aa		11.13	□□□□□ -0.63
MSI2-208	ENST00000579466	LOXHD1	Q8IVV2	1947 aa		11.13	□□□□□ -0.63
MSI2-208	ENST00000579466	ERICH2	A1L162	156 aa		11.12	□□□□□ -0.63
MSI2-208	ENST00000579466	PRR33	A8MZF0	331 aa		11.12	□□□□□ -0.63
MSI2-208	ENST00000579466		H3BNC9	293 aa		11.12	□□□□□ -0.63
MSI2-208	ENST00000579466	CYTH3	O43739	400 aa		11.12	□□□□□ -0.63
MSI2-208	ENST00000579466	TGFB3	P10600	412 aa		11.12	□□□□□ -0.63
MSI2-208	ENST00000579466	GHR	P10912	638 aa		11.12	□□□□□ -0.63
MSI2-208	ENST00000579466	IBSP	P21815	317 aa	Predicted RBP	11.12	□□□□□ -0.63
MSI2-208	ENST00000579466	MARK3	P27448	753 aa		11.12	□□□□□ -0.63
MSI2-208	ENST00000579466	NT5C2	P49902	561 aa		11.12	□□□□□ -0.63
MSI2-208	ENST00000579466	MRPS9	P82933	396 aa	Known RBP	11.12	□□□□□ -0.63
MSI2-208	ENST00000579466	NUCB1	Q02818	461 aa		11.12	□□□□□ -0.63
MSI2-208	ENST00000579466	TRDN	Q13061	729 aa		11.12	□□□□□ -0.63
MSI2-208	ENST00000579466	SEMA3F	Q13275	785 aa		11.12	□□□□□ -0.63
MSI2-208	ENST00000579466	METTL7B	Q6UX53	244 aa		11.12	□□□□□ -0.63
MSI2-208	ENST00000579466	FIBCD1	Q8N539	461 aa		11.12	□□□□□ -0.63
MSI2-208	ENST00000579466	SMARCC2	Q8TAQ2	1214 aa		11.12	□□□□□ -0.63
MSI2-208	ENST00000579466	NEK9	Q8TD19	979 aa		11.12	□□□□□ -0.63
MSI2-208	ENST00000579466	LMBR1	Q8WVP7	490 aa		11.12	□□□□□ -0.63
MSI2-208	ENST00000579466	TOP1MT	Q969P6	601 aa		11.12	□□□□□ -0.63
MSI2-208	ENST00000579466	SAMD11	Q96NU1	681 aa		11.12	□□□□□ -0.63
MSI2-208	ENST00000579466	GPR20	Q99678	358 aa		11.12	□□□□□ -0.63
MSI2-208	ENST00000579466	OSBPL3	Q9H4L5	887 aa		11.12	□□□□□ -0.63
MSI2-208	ENST00000579466	NSUN3	Q9H649	340 aa	Known RBP	11.12	□□□□□ -0.63
MSI2-208	ENST00000579466	MAP3K20	Q9NYL2	800 aa	Known RBP	11.12	□□□□□ -0.63
MSI2-208	ENST00000579466	ZNF215	Q9UL58	517 aa	Predicted RBP	11.12	□□□□□ -0.63
MSI2-208	ENST00000579466	PNMA6F	A0A0J9YX94	578 aa		11.11	□□□□□ -0.63
MSI2-208	ENST00000579466	FIBP	O43427	364 aa		11.11	□□□□□ -0.63
MSI2-208	ENST00000579466	ALAD	P13716	330 aa		11.11	□□□□□ -0.63
MSI2-208	ENST00000579466	HOXC8	P31273	242 aa		11.11	□□□□□ -0.63
MSI2-208	ENST00000579466	NEDD9	Q14511	834 aa		11.11	□□□□□ -0.63
MSI2-208	ENST00000579466	WTAP	Q15007	396 aa		11.11	□□□□□ -0.63
MSI2-208	ENST00000579466	USP17L6P	Q6QN14	398 aa		11.11	□□□□□ -0.63
MSI2-208	ENST00000579466	RUFY4	Q6ZNE9	571 aa		11.11	□□□□□ -0.63
MSI2-208	ENST00000579466	RALYL	Q86SE5	291 aa	Known RBP	11.11	□□□□□ -0.63
MSI2-208	ENST00000579466	RPAIN	Q86UA6	219 aa		11.11	□□□□□ -0.63
MSI2-208	ENST00000579466	PABPC5	Q96DU9	382 aa	Known RBP	11.11	□□□□□ -0.63
MSI2-208	ENST00000579466	MYL10	Q9BUA6	226 aa		11.11	□□□□□ -0.63
MSI2-208	ENST00000579466	USP26	Q9BXU7	913 aa		11.11	□□□□□ -0.63
MSI2-208	ENST00000579466	IGFLR1	Q9H665	355 aa		11.11	□□□□□ -0.63

Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms