RNA–Protein interactions for RNA: ENST00000578299.1

PTP4A1-204, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 2 BASIC

Gene PTP4A1, Length 135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-204ENST00000578299 TTLL11Q8NHH1 800 aa3.2□□□□□ -1.9
PTP4A1-204ENST00000578299 CPA5Q8WXQ8 436 aa3.2□□□□□ -1.9
PTP4A1-204ENST00000578299 DDX1Q92499 740 aaKnown RBP3.2□□□□□ -1.9
PTP4A1-204ENST00000578299 SLC38A3Q99624 504 aa3.2□□□□□ -1.9
PTP4A1-204ENST00000578299 YIPF4Q9BSR8 244 aa3.2□□□□□ -1.9
PTP4A1-204ENST00000578299 PDGFDQ9GZP0 370 aaPredicted RBP3.2□□□□□ -1.9
PTP4A1-204ENST00000578299 KCNK12Q9HB15 430 aa3.2□□□□□ -1.9
PTP4A1-204ENST00000578299 NGRNQ9NPE2 291 aaKnown RBP3.2□□□□□ -1.9
PTP4A1-204ENST00000578299 ASH2LQ9UBL3 628 aa3.2□□□□□ -1.9
PTP4A1-204ENST00000578299 COQ6Q9Y2Z9 468 aa3.2□□□□□ -1.9
PTP4A1-204ENST00000578299 PRKAB1Q9Y478 270 aa3.2□□□□□ -1.9
PTP4A1-204ENST00000578299 TCRBV5S4A2TA0A5A2 114 aa3.19□□□□□ -1.9
PTP4A1-204ENST00000578299 ETV2O00321 342 aaPredicted RBP3.19□□□□□ -1.9
PTP4A1-204ENST00000578299 NFIBO00712 420 aa3.19□□□□□ -1.9
PTP4A1-204ENST00000578299 MAN2B1O00754 1011 aa3.19□□□□□ -1.9
PTP4A1-204ENST00000578299 AMY2AP04746 511 aa3.19□□□□□ -1.9
PTP4A1-204ENST00000578299 JMJD7P0C870 316 aa3.19□□□□□ -1.9
PTP4A1-204ENST00000578299 MED14OSP0DP75 135 aa3.19□□□□□ -1.9
PTP4A1-204ENST00000578299 MYCLP1P12525 358 aaPredicted RBP3.19□□□□□ -1.9
PTP4A1-204ENST00000578299 KRT15P19012 456 aa3.19□□□□□ -1.9
PTP4A1-204ENST00000578299 AMY2BP19961 511 aa3.19□□□□□ -1.9
PTP4A1-204ENST00000578299 TXKP42681 527 aa3.19□□□□□ -1.9
PTP4A1-204ENST00000578299 NEK4P51957 841 aa3.19□□□□□ -1.9
PTP4A1-204ENST00000578299 EPHB3P54753 998 aa3.19□□□□□ -1.9
PTP4A1-204ENST00000578299 JAM2P57087 298 aa3.19□□□□□ -1.9
PTP4A1-204ENST00000578299 TUSC3Q13454 348 aa3.19□□□□□ -1.9
PTP4A1-204ENST00000578299 ARHGAP44Q17R89 818 aa3.19□□□□□ -1.9
PTP4A1-204ENST00000578299 PIK3R6Q5UE93 754 aa3.19□□□□□ -1.9
PTP4A1-204ENST00000578299 CDCA2Q69YH5 1023 aaPredicted RBP3.19□□□□□ -1.9
PTP4A1-204ENST00000578299 CNNM4Q6P4Q7 775 aa3.19□□□□□ -1.9
PTP4A1-204ENST00000578299 HHIPL2Q6UWX4 724 aa3.19□□□□□ -1.9
PTP4A1-204ENST00000578299 PNPLA5Q7Z6Z6 429 aaPredicted RBP3.19□□□□□ -1.9
PTP4A1-204ENST00000578299 ZC3H18Q86VM9 953 aaKnown RBP3.19□□□□□ -1.9
PTP4A1-204ENST00000578299 PTRH1Q86Y79 214 aaKnown RBP3.19□□□□□ -1.9
PTP4A1-204ENST00000578299 IGDCC3Q8IVU1 814 aa3.19□□□□□ -1.9
PTP4A1-204ENST00000578299 FAM126BQ8IXS8 530 aa3.19□□□□□ -1.9
PTP4A1-204ENST00000578299 AHI1Q8N157 1196 aa3.19□□□□□ -1.9
PTP4A1-204ENST00000578299 CISD2Q8N5K1 135 aaKnown RBP3.19□□□□□ -1.9
PTP4A1-204ENST00000578299 C2orf69Q8N8R5 385 aa3.19□□□□□ -1.9
PTP4A1-204ENST00000578299 ARRDC4Q8NCT1 418 aa3.19□□□□□ -1.9
PTP4A1-204ENST00000578299 SH3RF2Q8TEC5 729 aa3.19□□□□□ -1.9
PTP4A1-204ENST00000578299 DDX11Q96FC9 970 aa3.19□□□□□ -1.9
PTP4A1-204ENST00000578299 TOE1Q96GM8 510 aaKnown RBP3.19□□□□□ -1.9
PTP4A1-204ENST00000578299 WNK4Q96J92 1243 aa3.19□□□□□ -1.9
PTP4A1-204ENST00000578299 TARS2Q9BW92 718 aaKnown RBP3.19□□□□□ -1.9
PTP4A1-204ENST00000578299 SGPP1Q9BX95 441 aa3.19□□□□□ -1.9
PTP4A1-204ENST00000578299 BCAS3Q9H6U6 928 aa3.19□□□□□ -1.9
PTP4A1-204ENST00000578299 SMURF1Q9HCE7 757 aa3.19□□□□□ -1.9
PTP4A1-204ENST00000578299 PCDH18Q9HCL0 1135 aa3.19□□□□□ -1.9
PTP4A1-204ENST00000578299 GCM1Q9NP62 436 aa3.19□□□□□ -1.9
PTP4A1-204ENST00000578299 CABP5Q9NP86 173 aa3.19□□□□□ -1.9
PTP4A1-204ENST00000578299 SRPK3Q9UPE1 567 aa3.19□□□□□ -1.9
PTP4A1-204ENST00000578299 MAPRE3Q9UPY8 281 aa3.19□□□□□ -1.9
PTP4A1-204ENST00000578299 PCDHA5Q9Y5H7 936 aa3.19□□□□□ -1.9
PTP4A1-204ENST00000578299 ATP23Q9Y6H3 246 aa3.19□□□□□ -1.9
PTP4A1-204ENST00000578299 SHROOM4Q9ULL8 1493 aa3.19□□□□□ -1.9
PTP4A1-204ENST00000578299 TCAF2A6NFQ2 919 aa3.18□□□□□ -1.9
PTP4A1-204ENST00000578299 GSG1L2A8MUP6 293 aa3.18□□□□□ -1.9
PTP4A1-204ENST00000578299 M0R2C6 588 aa3.18□□□□□ -1.9
PTP4A1-204ENST00000578299 CBX4O00257 560 aa3.18□□□□□ -1.9
PTP4A1-204ENST00000578299 BUB1BO60566 1050 aaPredicted RBP3.18□□□□□ -1.9
PTP4A1-204ENST00000578299 PDE8AO60658 829 aa3.18□□□□□ -1.9
PTP4A1-204ENST00000578299 CLASP2O75122 1294 aaKnown RBP3.18□□□□□ -1.9
PTP4A1-204ENST00000578299 GLRX3O76003 335 aaKnown RBP3.18□□□□□ -1.9
PTP4A1-204ENST00000578299 TSPAN15O95858 294 aa3.18□□□□□ -1.9
PTP4A1-204ENST00000578299 CYP2C8P10632 490 aa3.18□□□□□ -1.9
PTP4A1-204ENST00000578299 ATF2P15336 505 aa3.18□□□□□ -1.9
PTP4A1-204ENST00000578299 IGFBP6P24592 240 aaPredicted RBP3.18□□□□□ -1.9
PTP4A1-204ENST00000578299 GJA4P35212 333 aa3.18□□□□□ -1.9
PTP4A1-204ENST00000578299 MASP1P48740 699 aa3.18□□□□□ -1.9
PTP4A1-204ENST00000578299 MECP2P51608 486 aaKnown RBP3.18□□□□□ -1.9
PTP4A1-204ENST00000578299 NCKAP1LP55160 1127 aa3.18□□□□□ -1.9
PTP4A1-204ENST00000578299 CACNB2Q08289 660 aaPredicted RBP3.18□□□□□ -1.9
PTP4A1-204ENST00000578299 PKN1Q16512 942 aa3.18□□□□□ -1.9
PTP4A1-204ENST00000578299 ZNF648Q5T619 568 aaPredicted RBP3.18□□□□□ -1.9
PTP4A1-204ENST00000578299 RNF187Q5TA31 235 aaPredicted RBP3.18□□□□□ -1.9
PTP4A1-204ENST00000578299 B3GNT8Q7Z7M8 397 aa3.18□□□□□ -1.9
PTP4A1-204ENST00000578299 KIF18BQ86Y91 864 aa3.18□□□□□ -1.9
PTP4A1-204ENST00000578299 CHST14Q8NCH0 376 aa3.18□□□□□ -1.9
PTP4A1-204ENST00000578299 CLEC4DQ8WXI8 215 aa3.18□□□□□ -1.9
PTP4A1-204ENST00000578299 SIGLEC10Q96LC7 697 aa3.18□□□□□ -1.9
PTP4A1-204ENST00000578299 ORAI3Q9BRQ5 295 aa3.18□□□□□ -1.9
PTP4A1-204ENST00000578299 CD244Q9BZW8 370 aa3.18□□□□□ -1.9
PTP4A1-204ENST00000578299 DTLQ9NZJ0 730 aa3.18□□□□□ -1.9
PTP4A1-204ENST00000578299 HSPBP1Q9NZL4 362 aa3.18□□□□□ -1.9
PTP4A1-204ENST00000578299 PLA2G2DQ9UNK4 145 aa3.18□□□□□ -1.9
PTP4A1-204ENST00000578299 FAN1Q9Y2M0 1017 aa3.18□□□□□ -1.9
PTP4A1-204ENST00000578299 IRAK3Q9Y616 596 aa3.18□□□□□ -1.9
PTP4A1-204ENST00000578299 SBNO2Q9Y2G9 1366 aa3.17□□□□□ -1.9
PTP4A1-204ENST00000578299 A0A087X0B3 334 aa3.17□□□□□ -1.9
PTP4A1-204ENST00000578299 SLC12A8A0AV02 714 aa3.17□□□□□ -1.9
PTP4A1-204ENST00000578299 PTPDC1A2A3K4 754 aa3.17□□□□□ -1.9
PTP4A1-204ENST00000578299 FAM83GA6ND36 823 aa3.17□□□□□ -1.9
PTP4A1-204ENST00000578299 RFXAPO00287 272 aa3.17□□□□□ -1.9
PTP4A1-204ENST00000578299 TRAF5O00463 557 aa3.17□□□□□ -1.9
PTP4A1-204ENST00000578299 KPNA6O60684 536 aa3.17□□□□□ -1.9
PTP4A1-204ENST00000578299 LRG1P02750 347 aa3.17□□□□□ -1.9
PTP4A1-204ENST00000578299 LTFP02788 710 aa3.17□□□□□ -1.9
PTP4A1-204ENST00000578299 C8BP07358 591 aa3.17□□□□□ -1.9
PTP4A1-204ENST00000578299 VIL1P09327 827 aaKnown RBP3.17□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms