RNA–Protein interactions for RNA: ENST00000578063.5

PRKCA-203, Transcript of protein kinase C alpha, humanhuman

TSL 1 (best)

Gene PRKCA, Length 1,733 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCA-203ENST00000578063 FAM133AQ8N9E0 248 aa20.81■□□□□ 0.92
PRKCA-203ENST00000578063 RAD54LQ92698 747 aa20.81■□□□□ 0.92
PRKCA-203ENST00000578063 STAMQ92783 540 aa20.81■□□□□ 0.92
PRKCA-203ENST00000578063 MMP19Q99542 508 aa20.81■□□□□ 0.92
PRKCA-203ENST00000578063 POLR3CQ9BUI4 534 aaPredicted RBP20.81■□□□□ 0.92
PRKCA-203ENST00000578063 BLOC1S4Q9NUP1 217 aa20.81■□□□□ 0.92
PRKCA-203ENST00000578063 B4DLN1 442 aa20.8■□□□□ 0.92
PRKCA-203ENST00000578063 TOMM70O94826 608 aa20.8■□□□□ 0.92
PRKCA-203ENST00000578063 CNTN2Q02246 1040 aa20.8■□□□□ 0.92
PRKCA-203ENST00000578063 MORC3Q14149 939 aa20.8■□□□□ 0.92
PRKCA-203ENST00000578063 GNPTABQ3T906 1256 aa20.8■□□□□ 0.92
PRKCA-203ENST00000578063 B3GNT9Q6UX72 402 aa20.8■□□□□ 0.92
PRKCA-203ENST00000578063 SV2BQ7L1I2 683 aa20.8■□□□□ 0.92
PRKCA-203ENST00000578063 MPHOSPH6Q99547 160 aaKnown RBP20.8■□□□□ 0.92
PRKCA-203ENST00000578063 LRRC27Q9C0I9 530 aa20.8■□□□□ 0.92
PRKCA-203ENST00000578063 CBX8Q9HC52 389 aa20.8■□□□□ 0.92
PRKCA-203ENST00000578063 RMND1Q9NWS8 449 aa20.8■□□□□ 0.92
PRKCA-203ENST00000578063 ABT1Q9ULW3 272 aaKnown RBP20.8■□□□□ 0.92
PRKCA-203ENST00000578063 LCTP09848 1927 aa20.8■□□□□ 0.92
PRKCA-203ENST00000578063 A0A087WWV3 80 aa20.79■□□□□ 0.92
PRKCA-203ENST00000578063 POTEB3A0JP26 581 aa20.79■□□□□ 0.92
PRKCA-203ENST00000578063 MED24O75448 989 aa20.79■□□□□ 0.92
PRKCA-203ENST00000578063 FCER1AP12319 257 aa20.79■□□□□ 0.92
PRKCA-203ENST00000578063 SEMA3FQ13275 785 aa20.79■□□□□ 0.92
PRKCA-203ENST00000578063 CUL4BQ13620 913 aa20.79■□□□□ 0.92
PRKCA-203ENST00000578063 STXBP2Q15833 593 aa20.79■□□□□ 0.92
PRKCA-203ENST00000578063 POTEBQ6S5H4 581 aa20.79■□□□□ 0.92
PRKCA-203ENST00000578063 ANKRD13CQ8N6S4 541 aa20.79■□□□□ 0.92
PRKCA-203ENST00000578063 CCDC102AQ96A19 550 aa20.79■□□□□ 0.92
PRKCA-203ENST00000578063 HHIPL1Q96JK4 782 aa20.79■□□□□ 0.92
PRKCA-203ENST00000578063 BPIFA3Q9BQP9 254 aa20.79■□□□□ 0.92
PRKCA-203ENST00000578063 BLZF1Q9H2G9 400 aa20.79■□□□□ 0.92
PRKCA-203ENST00000578063 UNC45AQ9H3U1 944 aa20.79■□□□□ 0.92
PRKCA-203ENST00000578063 EML1O00423 815 aa20.78■□□□□ 0.92
PRKCA-203ENST00000578063 EDNRBP24530 442 aa20.78■□□□□ 0.92
PRKCA-203ENST00000578063 INHBEP58166 350 aa20.78■□□□□ 0.92
PRKCA-203ENST00000578063 ECM1Q16610 540 aa20.78■□□□□ 0.92
PRKCA-203ENST00000578063 FAM110CQ1W6H9 321 aa20.78■□□□□ 0.92
PRKCA-203ENST00000578063 WDR78Q5VTH9 848 aa20.78■□□□□ 0.92
PRKCA-203ENST00000578063 CATSPER3Q86XQ3 398 aa20.78■□□□□ 0.92
PRKCA-203ENST00000578063 NEK9Q8TD19 979 aa20.78■□□□□ 0.92
PRKCA-203ENST00000578063 EIF2AK1Q9BQI3 630 aaKnown RBP20.78■□□□□ 0.92
PRKCA-203ENST00000578063 PORCNQ9H237 461 aa20.78■□□□□ 0.92
PRKCA-203ENST00000578063 TUFT1Q9NNX1 390 aa20.78■□□□□ 0.92
PRKCA-203ENST00000578063 DACH1Q9UI36 760 aa20.78■□□□□ 0.92
PRKCA-203ENST00000578063 KIAA1024Q9UPX6 916 aa20.78■□□□□ 0.92
PRKCA-203ENST00000578063 ASTN1O14525 1302 aa20.78■□□□□ 0.92
PRKCA-203ENST00000578063 DNAJC25-GNG10A0A024R161 153 aa20.78■□□□□ 0.92
PRKCA-203ENST00000578063 SOWAHBA6NEL2 793 aa20.78■□□□□ 0.92
PRKCA-203ENST00000578063 TMEM88BA6NKF7 163 aa20.78■□□□□ 0.92
PRKCA-203ENST00000578063 DHX15O43143 795 aaKnown RBP20.78■□□□□ 0.92
PRKCA-203ENST00000578063 CHMP2AO43633 222 aa20.78■□□□□ 0.92
PRKCA-203ENST00000578063 EIF3JO75822 258 aaKnown RBP20.78■□□□□ 0.92
PRKCA-203ENST00000578063 MUTP22033 750 aa20.78■□□□□ 0.92
PRKCA-203ENST00000578063 CASP1P29466 404 aa20.78■□□□□ 0.92
PRKCA-203ENST00000578063 ITGB3BPQ13352 177 aaPredicted RBP20.78■□□□□ 0.92
PRKCA-203ENST00000578063 EPHA7Q15375 998 aa20.78■□□□□ 0.92
PRKCA-203ENST00000578063 MLKLQ8NB16 471 aa20.78■□□□□ 0.92
PRKCA-203ENST00000578063 C7orf25Q9BPX7 421 aa20.78■□□□□ 0.92
PRKCA-203ENST00000578063 TRIM9Q9C026 710 aa20.78■□□□□ 0.92
PRKCA-203ENST00000578063 TCEAL9Q9UHQ7 104 aa20.78■□□□□ 0.92
PRKCA-203ENST00000578063 LOC102724159A0A0B4J2E5 919 aa20.77■□□□□ 0.92
PRKCA-203ENST00000578063 RPN1P04843 607 aaKnown RBP20.77■□□□□ 0.92
PRKCA-203ENST00000578063 SPATA31C1P0DKV0 1188 aa20.77■□□□□ 0.92
PRKCA-203ENST00000578063 PWP2Q15269 919 aaKnown RBP20.77■□□□□ 0.92
PRKCA-203ENST00000578063 ISM2Q6H9L7 571 aa20.77■□□□□ 0.92
PRKCA-203ENST00000578063 KCNK18Q7Z418 384 aa20.77■□□□□ 0.92
PRKCA-203ENST00000578063 ANP32BQ92688 251 aaKnown RBP20.77■□□□□ 0.92
PRKCA-203ENST00000578063 HSD17B14Q9BPX1 270 aa20.77■□□□□ 0.92
PRKCA-203ENST00000578063 R3HDMLQ9H3Y0 253 aa20.77■□□□□ 0.92
PRKCA-203ENST00000578063 EFCC1Q9HA90 598 aa20.77■□□□□ 0.92
PRKCA-203ENST00000578063 PKD2L1Q9P0L9 805 aa20.77■□□□□ 0.92
PRKCA-203ENST00000578063 PDE4DQ08499 809 aa20.76■□□□□ 0.91
PRKCA-203ENST00000578063 MCM6Q14566 821 aa20.76■□□□□ 0.91
PRKCA-203ENST00000578063 KCNB1Q14721 858 aa20.76■□□□□ 0.91
PRKCA-203ENST00000578063 ABRAQ8N0Z2 381 aa20.76■□□□□ 0.91
PRKCA-203ENST00000578063 POTEFA5A3E0 1075 aa20.75■□□□□ 0.91
PRKCA-203ENST00000578063 FAM155AB1AL88 458 aaPredicted RBP20.75■□□□□ 0.91
PRKCA-203ENST00000578063 IGF2BP3O00425 579 aaKnown RBP eCLIP20.75■□□□□ 0.91
PRKCA-203ENST00000578063 RGS20O76081 388 aa20.75■□□□□ 0.91
PRKCA-203ENST00000578063 BMP6P22004 513 aa20.75■□□□□ 0.91
PRKCA-203ENST00000578063 ICAM3P32942 547 aa20.75■□□□□ 0.91
PRKCA-203ENST00000578063 KRT76Q01546 638 aa20.75■□□□□ 0.91
PRKCA-203ENST00000578063 SREBF2Q12772 1141 aa20.75■□□□□ 0.91
PRKCA-203ENST00000578063 IQCB1Q15051 598 aa20.75■□□□□ 0.91
PRKCA-203ENST00000578063 CNNM4Q6P4Q7 775 aa20.75■□□□□ 0.91
PRKCA-203ENST00000578063 POTEGQ6S5H5 508 aa20.75■□□□□ 0.91
PRKCA-203ENST00000578063 MIER3Q7Z3K6 550 aa20.75■□□□□ 0.91
PRKCA-203ENST00000578063 LUZP1Q86V48 1076 aa20.75■□□□□ 0.91
PRKCA-203ENST00000578063 CCDC47Q96A33 483 aaKnown RBP20.75■□□□□ 0.91
PRKCA-203ENST00000578063 DNM3Q9UQ16 869 aa20.75■□□□□ 0.91
PRKCA-203ENST00000578063 SPATA31C2B4DYI2 1134 aa20.75■□□□□ 0.91
PRKCA-203ENST00000578063 DDX39AO00148 427 aaKnown RBP20.75■□□□□ 0.91
PRKCA-203ENST00000578063 STRNO43815 780 aa20.75■□□□□ 0.91
PRKCA-203ENST00000578063 PGK2P07205 417 aa20.75■□□□□ 0.91
PRKCA-203ENST00000578063 CYP4A11Q02928 519 aa20.75■□□□□ 0.91
PRKCA-203ENST00000578063 CT47A1Q5JQC4 288 aaPredicted RBP20.75■□□□□ 0.91
PRKCA-203ENST00000578063 GTPBP4Q9BZE4 634 aaKnown RBP20.75■□□□□ 0.91
PRKCA-203ENST00000578063 NFASCO94856 1347 aa20.75■□□□□ 0.91
PRKCA-203ENST00000578063 BECN2A8MW95 431 aa20.74■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 111.8 ms