RNA–Protein interactions for RNA: ENST00000577730.5

CDH8-205, Transcript of cadherin 8, humanhuman

TSL 5 BASIC

Gene CDH8, Length 8,009 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-205ENST00000577730 OTUD6AQ7L8S5 288 aa4.78□□□□□ -1.64
CDH8-205ENST00000577730 TRIM50Q86XT4 487 aa4.78□□□□□ -1.64
CDH8-205ENST00000577730 SKA1Q96BD8 255 aa4.78□□□□□ -1.64
CDH8-205ENST00000577730 FAM96AQ9H5X1 160 aa4.78□□□□□ -1.64
CDH8-205ENST00000577730 GGA2Q9UJY4 613 aa4.78□□□□□ -1.64
CDH8-205ENST00000577730 UHRF1BP1Q6BDS2 1440 aa4.77□□□□□ -1.65
CDH8-205ENST00000577730 MINDY4BA8MYZ0 360 aa4.77□□□□□ -1.65
CDH8-205ENST00000577730 CALM1P0DP23 149 aa4.77□□□□□ -1.65
CDH8-205ENST00000577730 CALM2P0DP24 149 aa4.77□□□□□ -1.65
CDH8-205ENST00000577730 CALM3P0DP25 149 aa4.77□□□□□ -1.65
CDH8-205ENST00000577730 CALML3P27482 149 aa4.77□□□□□ -1.65
CDH8-205ENST00000577730 RASGRF1Q13972 1273 aa4.77□□□□□ -1.65
CDH8-205ENST00000577730 DTHD1Q6ZMT9 781 aa4.77□□□□□ -1.65
CDH8-205ENST00000577730 CHST3Q7LGC8 479 aa4.77□□□□□ -1.65
CDH8-205ENST00000577730 REXO1L1PQ8IX06 675 aa4.77□□□□□ -1.65
CDH8-205ENST00000577730 CRACR2BQ8N4Y2 399 aaPredicted RBP4.77□□□□□ -1.65
CDH8-205ENST00000577730 LINC00301Q8NCQ3 95 aa4.77□□□□□ -1.65
CDH8-205ENST00000577730 DCLRE1BQ9H816 532 aa4.77□□□□□ -1.65
CDH8-205ENST00000577730 ZWILCHQ9H900 591 aa4.77□□□□□ -1.65
CDH8-205ENST00000577730 CIDEBQ9UHD4 219 aa4.77□□□□□ -1.65
CDH8-205ENST00000577730 TLK1Q9UKI8 766 aa4.77□□□□□ -1.65
CDH8-205ENST00000577730 ZBTB21Q9ULJ3 1066 aa4.77□□□□□ -1.65
CDH8-205ENST00000577730 RBM47A0AV96 593 aaKnown RBP4.77□□□□□ -1.65
CDH8-205ENST00000577730 RAPGEF3O95398 923 aa4.77□□□□□ -1.65
CDH8-205ENST00000577730 CCDC166P0CW27 439 aa4.77□□□□□ -1.65
CDH8-205ENST00000577730 SCNN1BP51168 640 aa4.77□□□□□ -1.65
CDH8-205ENST00000577730 FLOT2Q14254 428 aa4.77□□□□□ -1.65
CDH8-205ENST00000577730 C16orf72Q14CZ0 275 aa4.77□□□□□ -1.65
CDH8-205ENST00000577730 P3H1Q32P28 736 aa4.77□□□□□ -1.65
CDH8-205ENST00000577730 CCDC153Q494R4 210 aa4.77□□□□□ -1.65
CDH8-205ENST00000577730 PAWRQ96IZ0 340 aaKnown RBP4.77□□□□□ -1.65
CDH8-205ENST00000577730 MTA3Q9BTC8 594 aa4.77□□□□□ -1.65
CDH8-205ENST00000577730 CLIC4Q9Y696 253 aa4.77□□□□□ -1.65
CDH8-205ENST00000577730 ATXN2Q99700 1313 aaKnown RBP4.77□□□□□ -1.65
CDH8-205ENST00000577730 KPNA4O00629 521 aaPredicted RBP4.77□□□□□ -1.65
CDH8-205ENST00000577730 CYP27A1Q02318 531 aa4.77□□□□□ -1.65
CDH8-205ENST00000577730 HIC1Q14526 733 aa4.77□□□□□ -1.65
CDH8-205ENST00000577730 LRRC14Q15048 493 aa4.77□□□□□ -1.65
CDH8-205ENST00000577730 TRIP10Q15642 601 aa4.77□□□□□ -1.65
CDH8-205ENST00000577730 DCAF17Q5H9S7 520 aaPredicted RBP4.77□□□□□ -1.65
CDH8-205ENST00000577730 ATG16L1Q676U5 607 aa4.77□□□□□ -1.65
CDH8-205ENST00000577730 MAML1Q92585 1016 aa4.77□□□□□ -1.65
CDH8-205ENST00000577730 ANKZF1Q9H8Y5 726 aa4.77□□□□□ -1.65
CDH8-205ENST00000577730 C6orf203Q9P0P8 240 aaPredicted RBP4.77□□□□□ -1.65
CDH8-205ENST00000577730 CCDC189A1A4V9 331 aa4.77□□□□□ -1.65
CDH8-205ENST00000577730 IRF6O14896 467 aa4.77□□□□□ -1.65
CDH8-205ENST00000577730 HNRNPRO43390 633 aaKnown RBP4.77□□□□□ -1.65
CDH8-205ENST00000577730 GEN1Q17RS7 908 aa4.77□□□□□ -1.65
CDH8-205ENST00000577730 RBBP8NLQ8NC74 664 aaPredicted RBP4.77□□□□□ -1.65
CDH8-205ENST00000577730 ST13P5Q8NFI4 369 aaPredicted RBP4.77□□□□□ -1.65
CDH8-205ENST00000577730 PLIN2Q99541 437 aa4.77□□□□□ -1.65
CDH8-205ENST00000577730 MAK16Q9BXY0 300 aaKnown RBP4.77□□□□□ -1.65
CDH8-205ENST00000577730 SLC39A2Q9NP94 309 aa4.77□□□□□ -1.65
CDH8-205ENST00000577730 EPB41P11171 864 aaKnown RBP4.77□□□□□ -1.65
CDH8-205ENST00000577730 BRAFP15056 766 aa4.77□□□□□ -1.65
CDH8-205ENST00000577730 KRT31Q15323 416 aa4.77□□□□□ -1.65
CDH8-205ENST00000577730 TTC38Q5R3I4 469 aa4.77□□□□□ -1.65
CDH8-205ENST00000577730 MIS18BP1Q6P0N0 1132 aa4.77□□□□□ -1.65
CDH8-205ENST00000577730 GALNT15Q8N3T1 639 aa4.77□□□□□ -1.65
CDH8-205ENST00000577730 TSPYL6Q8N831 410 aa4.77□□□□□ -1.65
CDH8-205ENST00000577730 CNBD1Q8NA66 436 aa4.77□□□□□ -1.65
CDH8-205ENST00000577730 ZFYVE19Q96K21 471 aa4.77□□□□□ -1.65
CDH8-205ENST00000577730 CNBD2Q96M20 576 aa4.77□□□□□ -1.65
CDH8-205ENST00000577730 POLR3CQ9BUI4 534 aaPredicted RBP4.77□□□□□ -1.65
CDH8-205ENST00000577730 UPF3AQ9H1J1 476 aaKnown RBP4.77□□□□□ -1.65
CDH8-205ENST00000577730 MRPL44Q9H9J2 332 aaKnown RBP4.77□□□□□ -1.65
CDH8-205ENST00000577730 ABHD10Q9NUJ1 306 aa4.77□□□□□ -1.65
CDH8-205ENST00000577730 LRP2BPQ9P2M1 347 aa4.77□□□□□ -1.65
CDH8-205ENST00000577730 AP4S1Q9Y587 144 aa4.77□□□□□ -1.65
CDH8-205ENST00000577730 PRXQ9BXM0 1461 aa4.77□□□□□ -1.65
CDH8-205ENST00000577730 A0A1B0GW55 424 aa4.77□□□□□ -1.65
CDH8-205ENST00000577730 DUX4L2P0CJ85 424 aa4.77□□□□□ -1.65
CDH8-205ENST00000577730 DUX4L3P0CJ86 424 aa4.77□□□□□ -1.65
CDH8-205ENST00000577730 DUX4L4P0CJ87 422 aa4.77□□□□□ -1.65
CDH8-205ENST00000577730 DUX4L5P0CJ88 424 aa4.77□□□□□ -1.65
CDH8-205ENST00000577730 DUX4L6P0CJ89 424 aa4.77□□□□□ -1.65
CDH8-205ENST00000577730 DUX4L7P0CJ90 424 aa4.77□□□□□ -1.65
CDH8-205ENST00000577730 EIF4A3P38919 411 aaKnown RBP4.77□□□□□ -1.65
CDH8-205ENST00000577730 IGBP1P78318 339 aa4.77□□□□□ -1.65
CDH8-205ENST00000577730 ATP1A4Q13733 1029 aa4.77□□□□□ -1.65
CDH8-205ENST00000577730 LIN9Q5TKA1 542 aa4.77□□□□□ -1.65
CDH8-205ENST00000577730 PCNX4Q63HM2 1172 aa4.77□□□□□ -1.65
CDH8-205ENST00000577730 CAPN12Q6ZSI9 719 aa4.77□□□□□ -1.65
CDH8-205ENST00000577730 LRRC34Q8IZ02 419 aa4.77□□□□□ -1.65
CDH8-205ENST00000577730 NOA1Q8NC60 698 aaKnown RBP4.77□□□□□ -1.65
CDH8-205ENST00000577730 ZNF274Q96GC6 653 aaPredicted RBP4.77□□□□□ -1.65
CDH8-205ENST00000577730 ANKIB1Q9P2G1 1089 aa4.77□□□□□ -1.65
CDH8-205ENST00000577730 DUX4Q9UBX2 424 aa4.77□□□□□ -1.65
CDH8-205ENST00000577730 TBK1Q9UHD2 729 aa4.77□□□□□ -1.65
CDH8-205ENST00000577730 MAN1B1Q9UKM7 699 aa4.77□□□□□ -1.65
CDH8-205ENST00000577730 MAD1L1Q9Y6D9 718 aa4.77□□□□□ -1.65
CDH8-205ENST00000577730 EXOC1LA0A1B0GW35 172 aa4.76□□□□□ -1.65
CDH8-205ENST00000577730 HNRNPCL2B2RXH8 293 aa4.76□□□□□ -1.65
CDH8-205ENST00000577730 PSMD14O00487 310 aa4.76□□□□□ -1.65
CDH8-205ENST00000577730 ASNA1O43681 348 aa4.76□□□□□ -1.65
CDH8-205ENST00000577730 MT-ND3P03897 115 aa4.76□□□□□ -1.65
CDH8-205ENST00000577730 MYL1P05976 194 aa4.76□□□□□ -1.65
CDH8-205ENST00000577730 TMOD1P28289 359 aa4.76□□□□□ -1.65
CDH8-205ENST00000577730 CDC25CP30307 473 aa4.76□□□□□ -1.65
CDH8-205ENST00000577730 MRPL28Q13084 256 aaKnown RBP4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms