RNA–Protein interactions for RNA: ENST00000575483.5

CDC27-217, Transcript of cell division cycle 27, humanhuman

TSL 5

Gene CDC27, Length 781 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-217ENST00000575483 PTK7Q13308 1070 aa16.16■□□□□ 0.18
CDC27-217ENST00000575483 KIAA0753Q2KHM9 967 aa16.16■□□□□ 0.18
CDC27-217ENST00000575483 CELF3Q5SZQ8 465 aaKnown RBP16.16■□□□□ 0.18
CDC27-217ENST00000575483 GPKOWQ92917 476 aaPredicted RBP eCLIP16.16■□□□□ 0.18
CDC27-217ENST00000575483 YTHDC1Q96MU7 727 aaKnown RBP16.16■□□□□ 0.18
CDC27-217ENST00000575483 PIGSQ96S52 555 aa16.16■□□□□ 0.18
CDC27-217ENST00000575483 C16orf70Q9BSU1 422 aa16.16■□□□□ 0.18
CDC27-217ENST00000575483 PPFIA4O75335 1185 aa16.15■□□□□ 0.18
CDC27-217ENST00000575483 CHMLP26374 656 aa16.15■□□□□ 0.18
CDC27-217ENST00000575483 ANTXR2P58335 489 aa16.15■□□□□ 0.18
CDC27-217ENST00000575483 CNKSR3Q6P9H4 555 aa16.15■□□□□ 0.18
CDC27-217ENST00000575483 DHX37Q8IY37 1157 aaKnown RBP16.15■□□□□ 0.18
CDC27-217ENST00000575483 C7orf31Q8N865 590 aa16.15■□□□□ 0.18
CDC27-217ENST00000575483 KATNAL1Q9BW62 490 aa16.15■□□□□ 0.18
CDC27-217ENST00000575483 BCAS3Q9H6U6 928 aa16.15■□□□□ 0.18
CDC27-217ENST00000575483 PARNO95453 639 aaKnown RBP16.14■□□□□ 0.17
CDC27-217ENST00000575483 GGPS1O95749 300 aa16.14■□□□□ 0.17
CDC27-217ENST00000575483 MYCLP12524 364 aaPredicted RBP16.14■□□□□ 0.17
CDC27-217ENST00000575483 MRPS9P82933 396 aaKnown RBP16.14■□□□□ 0.17
CDC27-217ENST00000575483 SEMA3FQ13275 785 aa16.14■□□□□ 0.17
CDC27-217ENST00000575483 GRB10Q13322 594 aa16.14■□□□□ 0.17
CDC27-217ENST00000575483 ZNF618Q5T7W0 954 aa16.14■□□□□ 0.17
CDC27-217ENST00000575483 KCNV1Q6PIU1 500 aa16.14■□□□□ 0.17
CDC27-217ENST00000575483 SERINC5Q86VE9 423 aa16.14■□□□□ 0.17
CDC27-217ENST00000575483 HOMER1Q86YM7 354 aa16.14■□□□□ 0.17
CDC27-217ENST00000575483 ARNTL2Q8WYA1 636 aa16.14■□□□□ 0.17
CDC27-217ENST00000575483 NECAB3Q96P71 396 aaPredicted RBP16.14■□□□□ 0.17
CDC27-217ENST00000575483 UHRF1Q96T88 793 aaPredicted RBP16.14■□□□□ 0.17
CDC27-217ENST00000575483 ALG1Q9BT22 464 aa16.14■□□□□ 0.17
CDC27-217ENST00000575483 E7EWF7 191 aa16.13■□□□□ 0.17
CDC27-217ENST00000575483 GTPBP6O43824 516 aaPredicted RBP16.13■□□□□ 0.17
CDC27-217ENST00000575483 TLL1O43897 1013 aa16.13■□□□□ 0.17
CDC27-217ENST00000575483 GJB5O95377 273 aa16.13■□□□□ 0.17
CDC27-217ENST00000575483 TGFB3P10600 412 aa16.13■□□□□ 0.17
CDC27-217ENST00000575483 KCNQ1P51787 676 aa16.13■□□□□ 0.17
CDC27-217ENST00000575483 MICALL1Q8N3F8 863 aa16.13■□□□□ 0.17
CDC27-217ENST00000575483 IGDCC4Q8TDY8 1250 aa16.13■□□□□ 0.17
CDC27-217ENST00000575483 SPATA33Q96N06 139 aa16.13■□□□□ 0.17
CDC27-217ENST00000575483 INPP4AQ96PE3 977 aaPredicted RBP16.13■□□□□ 0.17
CDC27-217ENST00000575483 PNMA6FA0A0J9YX94 578 aa16.12■□□□□ 0.17
CDC27-217ENST00000575483 ABHD14A-ACY1A0A1B0GW23 586 aa16.12■□□□□ 0.17
CDC27-217ENST00000575483 KIF28PB7ZC32 967 aa16.12■□□□□ 0.17
CDC27-217ENST00000575483 GCOM1H8Y6P7 765 aaPredicted RBP16.12■□□□□ 0.17
CDC27-217ENST00000575483 IFIT3O14879 490 aaKnown RBP16.12■□□□□ 0.17
CDC27-217ENST00000575483 SGSM2O43147 1006 aa16.12■□□□□ 0.17
CDC27-217ENST00000575483 SORBS3O60504 671 aa16.12■□□□□ 0.17
CDC27-217ENST00000575483 POLR2MP0CAP2 368 aa16.12■□□□□ 0.17
CDC27-217ENST00000575483 ICAM3P32942 547 aa16.12■□□□□ 0.17
CDC27-217ENST00000575483 KCNJ6P48051 423 aa16.12■□□□□ 0.17
CDC27-217ENST00000575483 COL9A3Q14050 684 aaPredicted RBP16.12■□□□□ 0.17
CDC27-217ENST00000575483 MB21D2Q8IYB1 491 aaPredicted RBP16.12■□□□□ 0.17
CDC27-217ENST00000575483 COL4A6Q14031 1691 aa16.11■□□□□ 0.17
CDC27-217ENST00000575483 CCND2P30279 289 aa16.11■□□□□ 0.17
CDC27-217ENST00000575483 TRDNQ13061 729 aa16.11■□□□□ 0.17
CDC27-217ENST00000575483 FCHSD1Q86WN1 690 aa16.11■□□□□ 0.17
CDC27-217ENST00000575483 MAP4K1Q92918 833 aa16.11■□□□□ 0.17
CDC27-217ENST00000575483 OSBPL7Q9BZF2 842 aa16.11■□□□□ 0.17
CDC27-217ENST00000575483 TELO2Q9Y4R8 837 aa16.11■□□□□ 0.17
CDC27-217ENST00000575483 ATG2AQ2TAZ0 1938 aa16.11■□□□□ 0.17
CDC27-217ENST00000575483 C5orf42Q9H799 3197 aa16.11■□□□□ 0.17
CDC27-217ENST00000575483 NLRC5Q86WI3 1866 aa16.1■□□□□ 0.17
CDC27-217ENST00000575483 TRIOO75962 3097 aa16.1■□□□□ 0.17
CDC27-217ENST00000575483 LINC01553A4QN01 128 aa16.1■□□□□ 0.17
CDC27-217ENST00000575483 SPATA31C2B4DYI2 1134 aa16.1■□□□□ 0.17
CDC27-217ENST00000575483 LGR5O75473 907 aa16.1■□□□□ 0.17
CDC27-217ENST00000575483 LGALS2P05162 132 aa16.1■□□□□ 0.17
CDC27-217ENST00000575483 TRAF1Q13077 416 aa16.1■□□□□ 0.17
CDC27-217ENST00000575483 WTAPQ15007 396 aa16.1■□□□□ 0.17
CDC27-217ENST00000575483 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.1■□□□□ 0.172e-9■■■■□ 21.4
CDC27-217ENST00000575483 NCOA7Q8NI08 942 aa16.1■□□□□ 0.17
CDC27-217ENST00000575483 RAD9AQ99638 391 aa16.1■□□□□ 0.17
CDC27-217ENST00000575483 LY9Q9HBG7 655 aa16.1■□□□□ 0.17
CDC27-217ENST00000575483 KAT6AQ92794 2004 aa16.1■□□□□ 0.17
CDC27-217ENST00000575483 H3BRB1 525 aa16.09■□□□□ 0.17
CDC27-217ENST00000575483 EFCAB14O75071 495 aa16.09■□□□□ 0.17
CDC27-217ENST00000575483 ERVK-21P61565 698 aa16.09■□□□□ 0.17
CDC27-217ENST00000575483 ADAM17P78536 824 aa16.09■□□□□ 0.17
CDC27-217ENST00000575483 PLEKHG4Q58EX7 1191 aa16.09■□□□□ 0.17
CDC27-217ENST00000575483 METTL7BQ6UX53 244 aa16.09■□□□□ 0.17
CDC27-217ENST00000575483 SPRYD3Q8NCJ5 442 aa16.09■□□□□ 0.17
CDC27-217ENST00000575483 GDPD5Q8WTR4 605 aa16.09■□□□□ 0.17
CDC27-217ENST00000575483 RUFY2Q8WXA3 655 aa16.09■□□□□ 0.17
CDC27-217ENST00000575483 MAP3K14Q99558 947 aa16.09■□□□□ 0.17
CDC27-217ENST00000575483 GPR20Q99678 358 aa16.09■□□□□ 0.17
CDC27-217ENST00000575483 SPZ1Q9BXG8 430 aa16.09■□□□□ 0.17
CDC27-217ENST00000575483 TUT1Q9H6E5 874 aaKnown RBP16.09■□□□□ 0.17
CDC27-217ENST00000575483 SUGCTQ9HAC7 445 aa16.09■□□□□ 0.17
CDC27-217ENST00000575483 MYO7AQ13402 2215 aa16.09■□□□□ 0.17
CDC27-217ENST00000575483 PIK3CDO00329 1044 aa16.08■□□□□ 0.16
CDC27-217ENST00000575483 MEIS2O14770 477 aa16.08■□□□□ 0.16
CDC27-217ENST00000575483 TREHO43280 583 aa16.08■□□□□ 0.16
CDC27-217ENST00000575483 STAM2O75886 525 aa16.08■□□□□ 0.16
CDC27-217ENST00000575483 SMIM10L2AP0DMW4 78 aa16.08■□□□□ 0.16
CDC27-217ENST00000575483 SMIM10L2BP0DMW5 78 aa16.08■□□□□ 0.16
CDC27-217ENST00000575483 HTRA4P83105 476 aaPredicted RBP16.08■□□□□ 0.16
CDC27-217ENST00000575483 IKBKEQ14164 716 aa16.08■□□□□ 0.16
CDC27-217ENST00000575483 AAK1Q2M2I8 961 aa16.08■□□□□ 0.16
CDC27-217ENST00000575483 RALYLQ86SE5 291 aaKnown RBP16.08■□□□□ 0.16
CDC27-217ENST00000575483 DBF4BQ8NFT6 615 aa16.08■□□□□ 0.16
CDC27-217ENST00000575483 RNPEPQ9H4A4 650 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms