RNA–Protein interactions for RNA: ENST00000573903.1

CCDC40-210, Transcript of coiled-coil domain containing 40, humanhuman

TSL 4

Gene CCDC40, Length 561 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-210ENST00000573903 SMIM10L2BP0DMW5 78 aa14.06□□□□□ -0.16
CCDC40-210ENST00000573903 BMP1P13497 986 aa14.06□□□□□ -0.16
CCDC40-210ENST00000573903 COL9A1P20849 921 aa14.06□□□□□ -0.16
CCDC40-210ENST00000573903 SP2Q02086 613 aa14.06□□□□□ -0.16
CCDC40-210ENST00000573903 METTL7BQ6UX53 244 aa14.06□□□□□ -0.16
CCDC40-210ENST00000573903 MYOCDQ8IZQ8 938 aa14.06□□□□□ -0.16
CCDC40-210ENST00000573903 WNT8BQ93098 351 aa14.06□□□□□ -0.16
CCDC40-210ENST00000573903 INSL6Q9Y581 213 aa14.06□□□□□ -0.16
CCDC40-210ENST00000573903 FRMPD4Q14CM0 1322 aa14.06□□□□□ -0.16
CCDC40-210ENST00000573903 DOCK5Q9H7D0 1870 aa14.06□□□□□ -0.16
CCDC40-210ENST00000573903 TTC28Q96AY4 2481 aa14.05□□□□□ -0.16
CCDC40-210ENST00000573903 SGSM2O43147 1006 aa14.05□□□□□ -0.16
CCDC40-210ENST00000573903 CAND2O75155 1236 aa14.05□□□□□ -0.16
CCDC40-210ENST00000573903 ICAM3P32942 547 aa14.05□□□□□ -0.16
CCDC40-210ENST00000573903 ERVK-21P61565 698 aa14.05□□□□□ -0.16
CCDC40-210ENST00000573903 SLC35G1Q2M3R5 365 aa14.05□□□□□ -0.16
CCDC40-210ENST00000573903 TRAF7Q6Q0C0 670 aa14.05□□□□□ -0.16
CCDC40-210ENST00000573903 NFXL1Q6ZNB6 911 aa14.05□□□□□ -0.16
CCDC40-210ENST00000573903 CYFIP1Q7L576 1253 aa14.05□□□□□ -0.16
CCDC40-210ENST00000573903 NLRX1Q86UT6 975 aa14.05□□□□□ -0.16
CCDC40-210ENST00000573903 ZNF654Q8IZM8 581 aa14.05□□□□□ -0.16
CCDC40-210ENST00000573903 DBF4BQ8NFT6 615 aa14.05□□□□□ -0.16
CCDC40-210ENST00000573903 SEPT8Q92599 483 aa14.05□□□□□ -0.16
CCDC40-210ENST00000573903 GPKOWQ92917 476 aaPredicted RBP eCLIP14.05□□□□□ -0.16
CCDC40-210ENST00000573903 CCDC136Q96JN2 1154 aa14.05□□□□□ -0.16
CCDC40-210ENST00000573903 NECAB3Q96P71 396 aaPredicted RBP14.05□□□□□ -0.16
CCDC40-210ENST00000573903 INPP4AQ96PE3 977 aaPredicted RBP14.05□□□□□ -0.16
CCDC40-210ENST00000573903 MAP3K14Q99558 947 aa14.05□□□□□ -0.16
CCDC40-210ENST00000573903 LZTS2Q9BRK4 669 aa14.05□□□□□ -0.16
CCDC40-210ENST00000573903 SPZ1Q9BXG8 430 aa14.05□□□□□ -0.16
CCDC40-210ENST00000573903 SENP2Q9HC62 589 aa14.05□□□□□ -0.16
CCDC40-210ENST00000573903 LINC01553A4QN01 128 aa14.04□□□□□ -0.16
CCDC40-210ENST00000573903 CCDC69A6NI79 296 aa14.04□□□□□ -0.16
CCDC40-210ENST00000573903 CTSHP09668 335 aa14.04□□□□□ -0.16
CCDC40-210ENST00000573903 GNAQP50148 359 aa14.04□□□□□ -0.16
CCDC40-210ENST00000573903 MRPS9P82933 396 aaKnown RBP14.04□□□□□ -0.16
CCDC40-210ENST00000573903 MBTPS1Q14703 1052 aa14.04□□□□□ -0.16
CCDC40-210ENST00000573903 TCTN1Q2MV58 587 aa14.04□□□□□ -0.16
CCDC40-210ENST00000573903 XRRA1Q6P2D8 792 aa14.04□□□□□ -0.16
CCDC40-210ENST00000573903 SPRED2Q7Z698 418 aa14.04□□□□□ -0.16
CCDC40-210ENST00000573903 MB21D2Q8IYB1 491 aaPredicted RBP14.04□□□□□ -0.16
CCDC40-210ENST00000573903 GIMAP8Q8ND71 665 aaPredicted RBP14.04□□□□□ -0.16
CCDC40-210ENST00000573903 C1QTNF1Q9BXJ1 281 aa14.04□□□□□ -0.16
CCDC40-210ENST00000573903 RTEL1Q9NZ71 1219 aa14.04□□□□□ -0.16
CCDC40-210ENST00000573903 RBM8AQ9Y5S9 174 aaKnown RBP14.04□□□□□ -0.16
CCDC40-210ENST00000573903 SPATA31C2B4DYI2 1134 aa14.03□□□□□ -0.16
CCDC40-210ENST00000573903 TREHO43280 583 aa14.03□□□□□ -0.16
CCDC40-210ENST00000573903 LPXNO60711 386 aa14.03□□□□□ -0.16
CCDC40-210ENST00000573903 SMARCA1P28370 1054 aa14.03□□□□□ -0.16
CCDC40-210ENST00000573903 ANTXR2P58335 489 aa14.03□□□□□ -0.16
CCDC40-210ENST00000573903 SP4Q02446 784 aa14.03□□□□□ -0.16
CCDC40-210ENST00000573903 HIC1Q14526 733 aa14.03□□□□□ -0.16
CCDC40-210ENST00000573903 PLEKHG4Q58EX7 1191 aa14.03□□□□□ -0.16
CCDC40-210ENST00000573903 UTP14CQ5TAP6 766 aaKnown RBP14.03□□□□□ -0.16
CCDC40-210ENST00000573903 PCNX4Q63HM2 1172 aa14.03□□□□□ -0.16
CCDC40-210ENST00000573903 LIN28BQ6ZN17 250 aaKnown RBP eCLIP14.03□□□□□ -0.16
CCDC40-210ENST00000573903 TMTC2Q8N394 836 aa14.03□□□□□ -0.16
CCDC40-210ENST00000573903 FBXO22Q8NEZ5 403 aa14.03□□□□□ -0.16
CCDC40-210ENST00000573903 IGDCC4Q8TDY8 1250 aa14.03□□□□□ -0.16
CCDC40-210ENST00000573903 MAP4K1Q92918 833 aa14.03□□□□□ -0.16
CCDC40-210ENST00000573903 CDHR1Q96JP9 859 aa14.03□□□□□ -0.16
CCDC40-210ENST00000573903 SAMD11Q96NU1 681 aa14.03□□□□□ -0.16
CCDC40-210ENST00000573903 YME1L1Q96TA2 773 aa14.03□□□□□ -0.16
CCDC40-210ENST00000573903 GPR20Q99678 358 aa14.03□□□□□ -0.16
CCDC40-210ENST00000573903 MTA3Q9BTC8 594 aa14.03□□□□□ -0.16
CCDC40-210ENST00000573903 RNPEPQ9H4A4 650 aa14.03□□□□□ -0.16
CCDC40-210ENST00000573903 SUGCTQ9HAC7 445 aa14.03□□□□□ -0.16
CCDC40-210ENST00000573903 LY9Q9HBG7 655 aa14.03□□□□□ -0.16
CCDC40-210ENST00000573903 TAF6LQ9Y6J9 622 aa14.03□□□□□ -0.16
CCDC40-210ENST00000573903 KAT6AQ92794 2004 aa14.03□□□□□ -0.16
CCDC40-210ENST00000573903 PIK3CDO00329 1044 aa14.02□□□□□ -0.17
CCDC40-210ENST00000573903 PRC1O43663 620 aa14.02□□□□□ -0.17
CCDC40-210ENST00000573903 CALM1P0DP23 149 aa14.02□□□□□ -0.17
CCDC40-210ENST00000573903 CALM2P0DP24 149 aa14.02□□□□□ -0.17
CCDC40-210ENST00000573903 CALM3P0DP25 149 aa14.02□□□□□ -0.17
CCDC40-210ENST00000573903 HOXC8P31273 242 aa14.02□□□□□ -0.17
CCDC40-210ENST00000573903 MCM5P33992 734 aa14.02□□□□□ -0.17
CCDC40-210ENST00000573903 ARHGAP4P98171 946 aa14.02□□□□□ -0.17
CCDC40-210ENST00000573903 PTPROQ16827 1216 aa14.02□□□□□ -0.17
CCDC40-210ENST00000573903 USP17L6PQ6QN14 398 aa14.02□□□□□ -0.17
CCDC40-210ENST00000573903 APBB2Q92870 758 aa14.02□□□□□ -0.17
CCDC40-210ENST00000573903 TMEM87BQ96K49 555 aa14.02□□□□□ -0.17
CCDC40-210ENST00000573903 SENP7Q9BQF6 1050 aa14.02□□□□□ -0.17
CCDC40-210ENST00000573903 MYL10Q9BUA6 226 aa14.02□□□□□ -0.17
CCDC40-210ENST00000573903 SETD4Q9NVD3 440 aa14.02□□□□□ -0.17
CCDC40-210ENST00000573903 MUC3AQ02505 3323 aa14.01□□□□□ -0.17
CCDC40-210ENST00000573903 NRCAMQ92823 1304 aa14.01□□□□□ -0.17
CCDC40-210ENST00000573903 HTRA4P83105 476 aaPredicted RBP14.01□□□□□ -0.17
CCDC40-210ENST00000573903 SEMA3FQ13275 785 aa14.01□□□□□ -0.17
CCDC40-210ENST00000573903 TRIM50Q86XT4 487 aa14.01□□□□□ -0.17
CCDC40-210ENST00000573903 GPRASP2Q96D09 838 aa14.01□□□□□ -0.17
CCDC40-210ENST00000573903 BCAS3Q9H6U6 928 aa14.01□□□□□ -0.17
CCDC40-210ENST00000573903 EHMT1Q9H9B1 1298 aa14.01□□□□□ -0.17
CCDC40-210ENST00000573903 NLRC5Q86WI3 1866 aa14□□□□□ -0.17
CCDC40-210ENST00000573903 TRANK1O15050 2925 aa14□□□□□ -0.17
CCDC40-210ENST00000573903 SPDYE3A6NKU9 549 aa14□□□□□ -0.17
CCDC40-210ENST00000573903 MEIS2O14770 477 aa14□□□□□ -0.17
CCDC40-210ENST00000573903 UPP2O95045 317 aa14□□□□□ -0.17
CCDC40-210ENST00000573903 TCF7P36402 384 aaPredicted RBP14□□□□□ -0.17
CCDC40-210ENST00000573903 ERICH6BQ5W0A0 696 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms