RNA–Protein interactions for RNA: ENST00000573328.5

NPLOC4-212, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 2

Gene NPLOC4, Length 428 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-212ENST00000573328 PTK7Q13308 1070 aa11.08□□□□□ -0.64
NPLOC4-212ENST00000573328 UTP14CQ5TAP6 766 aaKnown RBP11.08□□□□□ -0.64
NPLOC4-212ENST00000573328 XRRA1Q6P2D8 792 aa11.08□□□□□ -0.64
NPLOC4-212ENST00000573328 METTL7BQ6UX53 244 aa11.08□□□□□ -0.64
NPLOC4-212ENST00000573328 RASEFQ8IZ41 740 aa11.08□□□□□ -0.64
NPLOC4-212ENST00000573328 PPM1EQ8WY54 764 aa11.08□□□□□ -0.64
NPLOC4-212ENST00000573328 DHX38Q92620 1227 aaKnown RBP11.08□□□□□ -0.64
NPLOC4-212ENST00000573328 PKD2L1Q9P0L9 805 aa11.08□□□□□ -0.64
NPLOC4-212ENST00000573328 ZNF215Q9UL58 517 aaPredicted RBP11.08□□□□□ -0.64
NPLOC4-212ENST00000573328 YBX2Q9Y2T7 364 aaKnown RBP11.08□□□□□ -0.64
NPLOC4-212ENST00000573328 PCDHA11Q9Y5I1 949 aa11.08□□□□□ -0.64
NPLOC4-212ENST00000573328 MYH9P35579 1960 aaKnown RBP11.08□□□□□ -0.64
NPLOC4-212ENST00000573328 NLRC5Q86WI3 1866 aa11.07□□□□□ -0.64
NPLOC4-212ENST00000573328 SPATA31C2B4DYI2 1134 aa11.07□□□□□ -0.64
NPLOC4-212ENST00000573328 H3BRB1 525 aa11.07□□□□□ -0.64
NPLOC4-212ENST00000573328 BAIAP3O94812 1187 aa11.07□□□□□ -0.64
NPLOC4-212ENST00000573328 PARNO95453 639 aaKnown RBP11.07□□□□□ -0.64
NPLOC4-212ENST00000573328 CPA1P15085 419 aa11.07□□□□□ -0.64
NPLOC4-212ENST00000573328 MYOGP15173 224 aa11.07□□□□□ -0.64
NPLOC4-212ENST00000573328 IGFBP4P22692 258 aa11.07□□□□□ -0.64
NPLOC4-212ENST00000573328 METAP2P50579 478 aaKnown RBP eCLIP11.07□□□□□ -0.64
NPLOC4-212ENST00000573328 ZNF200P98182 395 aaPredicted RBP11.07□□□□□ -0.64
NPLOC4-212ENST00000573328 EXOSC10Q01780 885 aaKnown RBP11.07□□□□□ -0.64
NPLOC4-212ENST00000573328 SEMA3FQ13275 785 aa11.07□□□□□ -0.64
NPLOC4-212ENST00000573328 WWC2Q6AWC2 1192 aa11.07□□□□□ -0.64
NPLOC4-212ENST00000573328 TRIM50Q86XT4 487 aa11.07□□□□□ -0.64
NPLOC4-212ENST00000573328 GIMAP8Q8ND71 665 aaPredicted RBP11.07□□□□□ -0.64
NPLOC4-212ENST00000573328 ATP6V0A1Q93050 837 aa11.07□□□□□ -0.64
NPLOC4-212ENST00000573328 CDHR1Q96JP9 859 aa11.07□□□□□ -0.64
NPLOC4-212ENST00000573328 JAKMIP1Q96N16 626 aaKnown RBP11.07□□□□□ -0.64
NPLOC4-212ENST00000573328 CTAGE1Q96RT6 745 aa11.07□□□□□ -0.64
NPLOC4-212ENST00000573328 C16orf70Q9BSU1 422 aa11.07□□□□□ -0.64
NPLOC4-212ENST00000573328 USP26Q9BXU7 913 aa11.07□□□□□ -0.64
NPLOC4-212ENST00000573328 TUT1Q9H6E5 874 aaKnown RBP11.07□□□□□ -0.64
NPLOC4-212ENST00000573328 BCAS3Q9H6U6 928 aa11.07□□□□□ -0.64
NPLOC4-212ENST00000573328 BRPF3Q9ULD4 1205 aa11.07□□□□□ -0.64
NPLOC4-212ENST00000573328 WDR81Q562E7 1941 aa11.07□□□□□ -0.64
NPLOC4-212ENST00000573328 TRANK1O15050 2925 aa11.07□□□□□ -0.64
NPLOC4-212ENST00000573328 KIF28PB7ZC32 967 aa11.06□□□□□ -0.64
NPLOC4-212ENST00000573328 REC8O95072 547 aa11.06□□□□□ -0.64
NPLOC4-212ENST00000573328 CA3P07451 260 aa11.06□□□□□ -0.64
NPLOC4-212ENST00000573328 SMIM10L2AP0DMW4 78 aa11.06□□□□□ -0.64
NPLOC4-212ENST00000573328 SMIM10L2BP0DMW5 78 aa11.06□□□□□ -0.64
NPLOC4-212ENST00000573328 THPOP40225 353 aa11.06□□□□□ -0.64
NPLOC4-212ENST00000573328 ADCY7P51828 1080 aa11.06□□□□□ -0.64
NPLOC4-212ENST00000573328 MTMR1Q13613 665 aa11.06□□□□□ -0.64
NPLOC4-212ENST00000573328 TSGA10IPQ3SY00 556 aa11.06□□□□□ -0.64
NPLOC4-212ENST00000573328 ZNF618Q5T7W0 954 aa11.06□□□□□ -0.64
NPLOC4-212ENST00000573328 PPP1R18Q6NYC8 613 aa11.06□□□□□ -0.64
NPLOC4-212ENST00000573328 CNKSR3Q6P9H4 555 aa11.06□□□□□ -0.64
NPLOC4-212ENST00000573328 BLOC1S2Q6QNY1 142 aa11.06□□□□□ -0.64
NPLOC4-212ENST00000573328 Q6ZUG5 572 aa11.06□□□□□ -0.64
NPLOC4-212ENST00000573328 GPRASP2Q96D09 838 aa11.06□□□□□ -0.64
NPLOC4-212ENST00000573328 VWCEQ96DN2 955 aa11.06□□□□□ -0.64
NPLOC4-212ENST00000573328 PGBD1Q96JS3 809 aa11.06□□□□□ -0.64
NPLOC4-212ENST00000573328 GPR20Q99678 358 aa11.06□□□□□ -0.64
NPLOC4-212ENST00000573328 PCDHA6Q9UN73 950 aa11.06□□□□□ -0.64
NPLOC4-212ENST00000573328 PCDHA8Q9Y5H6 950 aa11.06□□□□□ -0.64
NPLOC4-212ENST00000573328 hCG_1984214I3L0E3 225 aa11.05□□□□□ -0.64
NPLOC4-212ENST00000573328 CTSHP09668 335 aa11.05□□□□□ -0.64
NPLOC4-212ENST00000573328 GNAT1P11488 350 aa11.05□□□□□ -0.64
NPLOC4-212ENST00000573328 TCF7P36402 384 aaPredicted RBP11.05□□□□□ -0.64
NPLOC4-212ENST00000573328 WDR5P61964 334 aaKnown RBP11.05□□□□□ -0.64
NPLOC4-212ENST00000573328 ARHGAP4P98171 946 aa11.05□□□□□ -0.64
NPLOC4-212ENST00000573328 RBL2Q08999 1139 aa11.05□□□□□ -0.64
NPLOC4-212ENST00000573328 APOBRQ0VD83 1088 aa11.05□□□□□ -0.64
NPLOC4-212ENST00000573328 MICALL1Q8N3F8 863 aa11.05□□□□□ -0.64
NPLOC4-212ENST00000573328 ZNF713Q8N859 430 aaPredicted RBP11.05□□□□□ -0.64
NPLOC4-212ENST00000573328 PHOSPHO2Q8TCD6 241 aa11.05□□□□□ -0.64
NPLOC4-212ENST00000573328 BRF1Q92994 677 aa11.05□□□□□ -0.64
NPLOC4-212ENST00000573328 WNT8BQ93098 351 aa11.05□□□□□ -0.64
NPLOC4-212ENST00000573328 SENP7Q9BQF6 1050 aa11.05□□□□□ -0.64
NPLOC4-212ENST00000573328 ZBED2Q9BTP6 218 aa11.05□□□□□ -0.64
NPLOC4-212ENST00000573328 V9GY48 417 aaPredicted RBP11.05□□□□□ -0.64
NPLOC4-212ENST00000573328 EMSYQ7Z589 1322 aa11.05□□□□□ -0.64
NPLOC4-212ENST00000573328 REV3LO60673 3130 aa11.04□□□□□ -0.64
NPLOC4-212ENST00000573328 CCDC196A0A1B0GTZ2 297 aa11.04□□□□□ -0.64
NPLOC4-212ENST00000573328 SMCO2A6NFE2 343 aa11.04□□□□□ -0.64
NPLOC4-212ENST00000573328 RSPH10B2B2RC85 870 aa11.04□□□□□ -0.64
NPLOC4-212ENST00000573328 TREHO43280 583 aa11.04□□□□□ -0.64
NPLOC4-212ENST00000573328 TLL1O43897 1013 aa11.04□□□□□ -0.64
NPLOC4-212ENST00000573328 NBNO60934 754 aa11.04□□□□□ -0.64
NPLOC4-212ENST00000573328 RSPH10BP0C881 870 aa11.04□□□□□ -0.64
NPLOC4-212ENST00000573328 KCNA2P16389 499 aa11.04□□□□□ -0.64
NPLOC4-212ENST00000573328 ITGB5P18084 799 aa11.04□□□□□ -0.64
NPLOC4-212ENST00000573328 MARK3P27448 753 aa11.04□□□□□ -0.64
NPLOC4-212ENST00000573328 PSMA5P28066 241 aa11.04□□□□□ -0.64
NPLOC4-212ENST00000573328 CDC27P30260 824 aa11.04□□□□□ -0.64
NPLOC4-212ENST00000573328 HSPA4P34932 840 aa11.04□□□□□ -0.64
NPLOC4-212ENST00000573328 RCAN1P53805 252 aa11.04□□□□□ -0.64
NPLOC4-212ENST00000573328 HIC1Q14526 733 aa11.04□□□□□ -0.64
NPLOC4-212ENST00000573328 CCDC85BQ15834 202 aaPredicted RBP11.04□□□□□ -0.64
NPLOC4-212ENST00000573328 TRIM71Q2Q1W2 868 aaKnown RBP11.04□□□□□ -0.64
NPLOC4-212ENST00000573328 SERINC5Q86VE9 423 aa11.04□□□□□ -0.64
NPLOC4-212ENST00000573328 HERC6Q8IVU3 1022 aa11.04□□□□□ -0.64
NPLOC4-212ENST00000573328 GLG1Q92896 1179 aa11.04□□□□□ -0.64
NPLOC4-212ENST00000573328 ANO3Q9BYT9 981 aa11.04□□□□□ -0.64
NPLOC4-212ENST00000573328 GLT8D2Q9H1C3 349 aa11.04□□□□□ -0.64
NPLOC4-212ENST00000573328 RNPEPQ9H4A4 650 aa11.04□□□□□ -0.64
NPLOC4-212ENST00000573328 CERS4Q9HA82 394 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms