RNA–Protein interactions for RNA: ENST00000573153.5

SMG6-212, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-212ENST00000573153 KATNAL1Q9BW62 490 aa19.9■□□□□ 0.78
SMG6-212ENST00000573153 PCDHA6Q9UN73 950 aa19.9■□□□□ 0.78
SMG6-212ENST00000573153 PCDHA8Q9Y5H6 950 aa19.9■□□□□ 0.78
SMG6-212ENST00000573153 PFKMP08237 780 aa19.89■□□□□ 0.77
SMG6-212ENST00000573153 ADAM17P78536 824 aa19.89■□□□□ 0.77
SMG6-212ENST00000573153 PKN1Q16512 942 aa19.89■□□□□ 0.77
SMG6-212ENST00000573153 GNPTABQ3T906 1256 aa19.89■□□□□ 0.77
SMG6-212ENST00000573153 PPP1R18Q6NYC8 613 aa19.89■□□□□ 0.77
SMG6-212ENST00000573153 TRIM50Q86XT4 487 aa19.89■□□□□ 0.77
SMG6-212ENST00000573153 UNC80Q8N2C7 3258 aa19.89■□□□□ 0.77
SMG6-212ENST00000573153 CAGE1Q8TC20 777 aa19.89■□□□□ 0.77
SMG6-212ENST00000573153 CRYGNQ8WXF5 182 aa19.89■□□□□ 0.77
SMG6-212ENST00000573153 BRF1Q92994 677 aa19.89■□□□□ 0.77
SMG6-212ENST00000573153 CUL5Q93034 780 aa19.89■□□□□ 0.77
SMG6-212ENST00000573153 TIFAQ96CG3 184 aa19.89■□□□□ 0.77
SMG6-212ENST00000573153 GPRASP2Q96D09 838 aa19.89■□□□□ 0.77
SMG6-212ENST00000573153 RIC8AQ9NPQ8 531 aa19.89■□□□□ 0.77
SMG6-212ENST00000573153 BARHL2Q9NY43 387 aa19.89■□□□□ 0.77
SMG6-212ENST00000573153 V9GY48 417 aaPredicted RBP19.89■□□□□ 0.77
SMG6-212ENST00000573153 PRUNE2Q8WUY3 3088 aa19.88■□□□□ 0.77
SMG6-212ENST00000573153 NBNO60934 754 aa19.88■□□□□ 0.77
SMG6-212ENST00000573153 CXCL10P02778 98 aa19.88■□□□□ 0.77
SMG6-212ENST00000573153 RFC2P35250 354 aa19.88■□□□□ 0.77
SMG6-212ENST00000573153 MKRN4PQ13434 485 aaPredicted RBP19.88■□□□□ 0.77
SMG6-212ENST00000573153 NEDD9Q14511 834 aa19.88■□□□□ 0.77
SMG6-212ENST00000573153 DEFB128Q7Z7B8 93 aa19.88■□□□□ 0.77
SMG6-212ENST00000573153 AFAP1L1Q8TED9 768 aa19.88■□□□□ 0.77
SMG6-212ENST00000573153 PGBD1Q96JS3 809 aa19.88■□□□□ 0.77
SMG6-212ENST00000573153 MLXIPQ9HAP2 919 aa19.88■□□□□ 0.77
SMG6-212ENST00000573153 H3BRB1 525 aa19.87■□□□□ 0.77
SMG6-212ENST00000573153 CKBP12277 381 aa19.87■□□□□ 0.77
SMG6-212ENST00000573153 CHMP4BP1P59074 171 aa19.87■□□□□ 0.77
SMG6-212ENST00000573153 PTK7Q13308 1070 aa19.87■□□□□ 0.77
SMG6-212ENST00000573153 BFSP2Q13515 415 aa19.87■□□□□ 0.77
SMG6-212ENST00000573153 TOB2Q14106 344 aaPredicted RBP19.87■□□□□ 0.77
SMG6-212ENST00000573153 BLOC1S2Q6QNY1 142 aa19.87■□□□□ 0.77
SMG6-212ENST00000573153 SERINC5Q86VE9 423 aa19.87■□□□□ 0.77
SMG6-212ENST00000573153 RPUSD2Q8IZ73 545 aaKnown RBP19.87■□□□□ 0.77
SMG6-212ENST00000573153 C7orf31Q8N865 590 aa19.87■□□□□ 0.77
SMG6-212ENST00000573153 CYP2W1Q8TAV3 490 aa19.87■□□□□ 0.77
SMG6-212ENST00000573153 USP26Q9BXU7 913 aa19.87■□□□□ 0.77
SMG6-212ENST00000573153 ZNF576Q9H609 170 aa19.87■□□□□ 0.77
SMG6-212ENST00000573153 TUT1Q9H6E5 874 aaKnown RBP19.87■□□□□ 0.77
SMG6-212ENST00000573153 GSTTP1A0A1W2PQM5 241 aa19.86■□□□□ 0.77
SMG6-212ENST00000573153 ARHGEF15O94989 841 aa19.86■□□□□ 0.77
SMG6-212ENST00000573153 MYOGP15173 224 aa19.86■□□□□ 0.77
SMG6-212ENST00000573153 SELPP16109 830 aa19.86■□□□□ 0.77
SMG6-212ENST00000573153 RABGGTBP53611 331 aa19.86■□□□□ 0.77
SMG6-212ENST00000573153 PFKFB3Q16875 520 aaPredicted RBP19.86■□□□□ 0.77
SMG6-212ENST00000573153 LRRC8DQ7L1W4 858 aa19.86■□□□□ 0.77
SMG6-212ENST00000573153 OSBPL7Q9BZF2 842 aa19.86■□□□□ 0.77
SMG6-212ENST00000573153 ZSWIM6Q9HCJ5 1215 aa19.86■□□□□ 0.77
SMG6-212ENST00000573153 JADE2Q9NQC1 790 aa19.86■□□□□ 0.77
SMG6-212ENST00000573153 TMEM260Q9NX78 707 aa19.86■□□□□ 0.77
SMG6-212ENST00000573153 hCG_1984214I3L0E3 225 aa19.85■□□□□ 0.77
SMG6-212ENST00000573153 EDIL3O43854 480 aa19.85■□□□□ 0.77
SMG6-212ENST00000573153 SMIM10L2AP0DMW4 78 aa19.85■□□□□ 0.77
SMG6-212ENST00000573153 SMIM10L2BP0DMW5 78 aa19.85■□□□□ 0.77
SMG6-212ENST00000573153 PSMA5P28066 241 aa19.85■□□□□ 0.77
SMG6-212ENST00000573153 METAP2P50579 478 aaKnown RBP eCLIP19.85■□□□□ 0.77
SMG6-212ENST00000573153 NAPAP54920 295 aa19.85■□□□□ 0.77
SMG6-212ENST00000573153 ZNF618Q5T7W0 954 aa19.85■□□□□ 0.77
SMG6-212ENST00000573153 ZNF713Q8N859 430 aaPredicted RBP19.85■□□□□ 0.77
SMG6-212ENST00000573153 PCYT2Q99447 389 aa19.85■□□□□ 0.77
SMG6-212ENST00000573153 ANO3Q9BYT9 981 aa19.85■□□□□ 0.77
SMG6-212ENST00000573153 NKX2-4Q9H2Z4 354 aa19.85■□□□□ 0.77
SMG6-212ENST00000573153 RNPEPQ9H4A4 650 aa19.85■□□□□ 0.77
SMG6-212ENST00000573153 SIP14410 1827 aa19.85■□□□□ 0.77
SMG6-212ENST00000573153 SREBF1P36956 1147 aa19.84■□□□□ 0.77
SMG6-212ENST00000573153 NLRX1Q86UT6 975 aa19.84■□□□□ 0.77
SMG6-212ENST00000573153 NOD1Q9Y239 953 aa19.84■□□□□ 0.77
SMG6-212ENST00000573153 ESYT2A0FGR8 921 aa19.83■□□□□ 0.77
SMG6-212ENST00000573153 SPDYE3A6NKU9 549 aa19.83■□□□□ 0.77
SMG6-212ENST00000573153 TREHO43280 583 aa19.83■□□□□ 0.77
SMG6-212ENST00000573153 PDIA3P30101 505 aaKnown RBP19.83■□□□□ 0.77
SMG6-212ENST00000573153 MTMR1Q13613 665 aa19.83■□□□□ 0.77
SMG6-212ENST00000573153 ADGRE1Q14246 886 aa19.83■□□□□ 0.77
SMG6-212ENST00000573153 USP38Q8NB14 1042 aa19.83■□□□□ 0.77
SMG6-212ENST00000573153 RETREG2Q8NC44 543 aa19.83■□□□□ 0.77
SMG6-212ENST00000573153 MXRA8Q9BRK3 442 aa19.83■□□□□ 0.77
SMG6-212ENST00000573153 ZMYND12Q9H0C1 365 aa19.83■□□□□ 0.77
SMG6-212ENST00000573153 SLC4A7Q9Y6M7 1214 aa19.83■□□□□ 0.77
SMG6-212ENST00000573153 CCDC196A0A1B0GTZ2 297 aa19.82■□□□□ 0.76
SMG6-212ENST00000573153 SMCO2A6NFE2 343 aa19.82■□□□□ 0.76
SMG6-212ENST00000573153 PRPF3O43395 683 aaKnown RBP19.82■□□□□ 0.76
SMG6-212ENST00000573153 ARP10275 920 aa19.82■□□□□ 0.76
SMG6-212ENST00000573153 SCG2P13521 617 aa19.82■□□□□ 0.76
SMG6-212ENST00000573153 ATP2A2P16615 1042 aaKnown RBP19.82■□□□□ 0.76
SMG6-212ENST00000573153 TCF7P36402 384 aaPredicted RBP19.82■□□□□ 0.76
SMG6-212ENST00000573153 ADCY7P51828 1080 aa19.82■□□□□ 0.76
SMG6-212ENST00000573153 ITGB3BPQ13352 177 aaPredicted RBP19.82■□□□□ 0.76
SMG6-212ENST00000573153 RAB30Q15771 203 aa19.82■□□□□ 0.76
SMG6-212ENST00000573153 RUFY3Q7L099 469 aa19.82■□□□□ 0.76
SMG6-212ENST00000573153 PHKBQ93100 1093 aa19.82■□□□□ 0.76
SMG6-212ENST00000573153 TM6SF1Q9BZW5 370 aa19.82■□□□□ 0.76
SMG6-212ENST00000573153 MTIF3Q9H2K0 278 aaKnown RBP19.82■□□□□ 0.76
SMG6-212ENST00000573153 KCNH7Q9NS40 1196 aa19.82■□□□□ 0.76
SMG6-212ENST00000573153 PCDHA11Q9Y5I1 949 aa19.82■□□□□ 0.76
SMG6-212ENST00000573153 A0A0C4DFX4 3053 aa19.82■□□□□ 0.76
SMG6-212ENST00000573153 IGLV3-22A0A075B6J6 115 aa19.81■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms