RNA–Protein interactions for RNA: ENST00000569062.1

ABCA3-206, Transcript of ATP binding cassette subfamily A member 3, humanhuman

TSL 5

Gene ABCA3, Length 900 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3-206ENST00000569062 HERVK_113Q902F9 699 aa23.08■■□□□ 1.29
ABCA3-206ENST00000569062 PHKBQ93100 1093 aa23.08■■□□□ 1.29
ABCA3-206ENST00000569062 GPR20Q99678 358 aa23.08■■□□□ 1.29
ABCA3-206ENST00000569062 TMEM260Q9NX78 707 aa23.08■■□□□ 1.29
ABCA3-206ENST00000569062 CXXC1Q9P0U4 656 aaPredicted RBP23.08■■□□□ 1.29
ABCA3-206ENST00000569062 GRXCR1A8MXD5 290 aa23.07■■□□□ 1.28
ABCA3-206ENST00000569062 IQCF3P0C7M6 154 aa23.07■■□□□ 1.28
ABCA3-206ENST00000569062 SCG2P13521 617 aa23.07■■□□□ 1.28
ABCA3-206ENST00000569062 EVCP57679 992 aa23.07■■□□□ 1.28
ABCA3-206ENST00000569062 ZNF200P98182 395 aaPredicted RBP23.07■■□□□ 1.28
ABCA3-206ENST00000569062 SP4Q02446 784 aa23.07■■□□□ 1.28
ABCA3-206ENST00000569062 BFSP2Q13515 415 aa23.07■■□□□ 1.28
ABCA3-206ENST00000569062 HIC1Q14526 733 aa23.07■■□□□ 1.28
ABCA3-206ENST00000569062 NTRK3Q16288 839 aa23.07■■□□□ 1.28
ABCA3-206ENST00000569062 PKN1Q16512 942 aa23.07■■□□□ 1.28
ABCA3-206ENST00000569062 DEFB128Q7Z7B8 93 aa23.07■■□□□ 1.28
ABCA3-206ENST00000569062 DHX38Q92620 1227 aaKnown RBP23.07■■□□□ 1.28
ABCA3-206ENST00000569062 LARP6Q9BRS8 491 aaKnown RBP23.07■■□□□ 1.28
ABCA3-206ENST00000569062 UPF3BQ9BZI7 483 aaKnown RBP23.07■■□□□ 1.28
ABCA3-206ENST00000569062 TM6SF1Q9BZW5 370 aa23.07■■□□□ 1.28
ABCA3-206ENST00000569062 NCOA5Q9HCD5 579 aaKnown RBP23.07■■□□□ 1.28
ABCA3-206ENST00000569062 CYP46A1Q9Y6A2 500 aa23.07■■□□□ 1.28
ABCA3-206ENST00000569062 H3BRB1 525 aa23.06■■□□□ 1.28
ABCA3-206ENST00000569062 PRPF3O43395 683 aaKnown RBP23.06■■□□□ 1.28
ABCA3-206ENST00000569062 KCNA2P16389 499 aa23.06■■□□□ 1.28
ABCA3-206ENST00000569062 CLK2P49760 499 aaKnown RBP23.06■■□□□ 1.28
ABCA3-206ENST00000569062 MTMR1Q13613 665 aa23.06■■□□□ 1.28
ABCA3-206ENST00000569062 RETREG2Q8NC44 543 aa23.06■■□□□ 1.28
ABCA3-206ENST00000569062 GUCD1Q96NT3 240 aa23.06■■□□□ 1.28
ABCA3-206ENST00000569062 ANO3Q9BYT9 981 aa23.06■■□□□ 1.28
ABCA3-206ENST00000569062 TTYH1Q9H313 450 aaPredicted RBP23.06■■□□□ 1.28
ABCA3-206ENST00000569062 TUT1Q9H6E5 874 aaKnown RBP23.06■■□□□ 1.28
ABCA3-206ENST00000569062 EHMT1Q9H9B1 1298 aa23.06■■□□□ 1.28
ABCA3-206ENST00000569062 PKD2L1Q9P0L9 805 aa23.06■■□□□ 1.28
ABCA3-206ENST00000569062 TET1Q8NFU7 2136 aa23.05■■□□□ 1.28
ABCA3-206ENST00000569062 ADAMTS3O15072 1205 aa23.05■■□□□ 1.28
ABCA3-206ENST00000569062 TRIM50Q86XT4 487 aa23.05■■□□□ 1.28
ABCA3-206ENST00000569062 CAGE1Q8TC20 777 aa23.05■■□□□ 1.28
ABCA3-206ENST00000569062 CDHR1Q96JP9 859 aa23.05■■□□□ 1.28
ABCA3-206ENST00000569062 SEMA6BQ9H3T3 888 aa23.05■■□□□ 1.28
ABCA3-206ENST00000569062 JADE2Q9NQC1 790 aa23.05■■□□□ 1.28
ABCA3-206ENST00000569062 FOSP01100 380 aaPredicted RBP23.04■■□□□ 1.28
ABCA3-206ENST00000569062 DNAJB2P25686 324 aa23.04■■□□□ 1.28
ABCA3-206ENST00000569062 UTP14CQ5TAP6 766 aaKnown RBP23.04■■□□□ 1.28
ABCA3-206ENST00000569062 TEX2Q8IWB9 1127 aa23.04■■□□□ 1.28
ABCA3-206ENST00000569062 GIMAP8Q8ND71 665 aaPredicted RBP23.04■■□□□ 1.28
ABCA3-206ENST00000569062 CYP2W1Q8TAV3 490 aa23.04■■□□□ 1.28
ABCA3-206ENST00000569062 WNT8BQ93098 351 aa23.04■■□□□ 1.28
ABCA3-206ENST00000569062 MXRA8Q9BRK3 442 aa23.04■■□□□ 1.28
ABCA3-206ENST00000569062 RBAK-RBAKDNI3L0D1 243 aa23.03■■□□□ 1.28
ABCA3-206ENST00000569062 IFNAR1P17181 557 aa23.03■■□□□ 1.28
ABCA3-206ENST00000569062 RFC2P35250 354 aa23.03■■□□□ 1.28
ABCA3-206ENST00000569062 PBX2P40425 430 aa23.03■■□□□ 1.28
ABCA3-206ENST00000569062 AP3B2Q13367 1082 aa23.03■■□□□ 1.28
ABCA3-206ENST00000569062 JAKMIP3Q5VZ66 844 aa23.03■■□□□ 1.28
ABCA3-206ENST00000569062 CCDC155Q8N6L0 562 aa23.03■■□□□ 1.28
ABCA3-206ENST00000569062 AFAP1L1Q8TED9 768 aa23.03■■□□□ 1.28
ABCA3-206ENST00000569062 SLC26A6Q9BXS9 759 aa23.03■■□□□ 1.28
ABCA3-206ENST00000569062 RNF26Q9BY78 433 aaPredicted RBP23.03■■□□□ 1.28
ABCA3-206ENST00000569062 PBX4Q9BYU1 374 aa23.03■■□□□ 1.28
ABCA3-206ENST00000569062 ZMYND12Q9H0C1 365 aa23.03■■□□□ 1.28
ABCA3-206ENST00000569062 GLT8D2Q9H1C3 349 aa23.03■■□□□ 1.28
ABCA3-206ENST00000569062 MTIF3Q9H2K0 278 aaKnown RBP23.03■■□□□ 1.28
ABCA3-206ENST00000569062 MAFGO15525 162 aa23.02■■□□□ 1.28
ABCA3-206ENST00000569062 PFKMP08237 780 aa23.02■■□□□ 1.28
ABCA3-206ENST00000569062 SMIM10L2AP0DMW4 78 aa23.02■■□□□ 1.28
ABCA3-206ENST00000569062 SMIM10L2BP0DMW5 78 aa23.02■■□□□ 1.28
ABCA3-206ENST00000569062 CKBP12277 381 aa23.02■■□□□ 1.28
ABCA3-206ENST00000569062 TCF7P36402 384 aaPredicted RBP23.02■■□□□ 1.28
ABCA3-206ENST00000569062 SREBF1P36956 1147 aa23.02■■□□□ 1.28
ABCA3-206ENST00000569062 AKAP17AQ02040 695 aaKnown RBP23.02■■□□□ 1.28
ABCA3-206ENST00000569062 RBL2Q08999 1139 aa23.02■■□□□ 1.28
ABCA3-206ENST00000569062 PTK7Q13308 1070 aa23.02■■□□□ 1.28
ABCA3-206ENST00000569062 RNPEPQ9H4A4 650 aa23.02■■□□□ 1.28
ABCA3-206ENST00000569062 KCNH7Q9NS40 1196 aa23.02■■□□□ 1.28
ABCA3-206ENST00000569062 PDRG1Q9NUG6 133 aa23.02■■□□□ 1.28
ABCA3-206ENST00000569062 STXBP5LQ9Y2K9 1186 aa23.02■■□□□ 1.28
ABCA3-206ENST00000569062 GSTTP1A0A1W2PQM5 241 aa23.01■■□□□ 1.27
ABCA3-206ENST00000569062 ESYT2A0FGR8 921 aa23.01■■□□□ 1.27
ABCA3-206ENST00000569062 C17orf102A2RUQ5 167 aa23.01■■□□□ 1.27
ABCA3-206ENST00000569062 ZBBXA8MT70 800 aa23.01■■□□□ 1.27
ABCA3-206ENST00000569062 ARP10275 920 aa23.01■■□□□ 1.27
ABCA3-206ENST00000569062 SELPP16109 830 aa23.01■■□□□ 1.27
ABCA3-206ENST00000569062 GPNMBQ14956 572 aa23.01■■□□□ 1.27
ABCA3-206ENST00000569062 TRIM71Q2Q1W2 868 aaKnown RBP23.01■■□□□ 1.27
ABCA3-206ENST00000569062 LRRC8DQ7L1W4 858 aa23.01■■□□□ 1.27
ABCA3-206ENST00000569062 ZNF274Q96GC6 653 aaPredicted RBP23.01■■□□□ 1.27
ABCA3-206ENST00000569062 KAT6AQ92794 2004 aa23■■□□□ 1.27
ABCA3-206ENST00000569062 HOXC8P31273 242 aa23■■□□□ 1.27
ABCA3-206ENST00000569062 STK3Q13188 491 aa23■■□□□ 1.27
ABCA3-206ENST00000569062 CEP55Q53EZ4 464 aa23■■□□□ 1.27
ABCA3-206ENST00000569062 CCDC12Q8WUD4 166 aaPredicted RBP23■■□□□ 1.27
ABCA3-206ENST00000569062 ATP6V0A1Q93050 837 aa23■■□□□ 1.27
ABCA3-206ENST00000569062 CDX2Q99626 313 aaPredicted RBP23■■□□□ 1.27
ABCA3-206ENST00000569062 FTOQ9C0B1 505 aaKnown RBP eCLIP23■■□□□ 1.27
ABCA3-206ENST00000569062 C6orf50Q9HD87 102 aa23■■□□□ 1.27
ABCA3-206ENST00000569062 SLC4A7Q9Y6M7 1214 aa23■■□□□ 1.27
ABCA3-206ENST00000569062 TMEM265A0A087WTH1 108 aa22.99■■□□□ 1.27
ABCA3-206ENST00000569062 TREHO43280 583 aa22.99■■□□□ 1.27
ABCA3-206ENST00000569062 ARHGAP4P98171 946 aa22.99■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms