RNA–Protein interactions for RNA: ENST00000568676.5

HERPUD1-215, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 571 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-215ENST00000568676 MAD2L2Q9UI95 211 aa18.26■□□□□ 0.51
HERPUD1-215ENST00000568676 H3BNC9 293 aa18.25■□□□□ 0.51
HERPUD1-215ENST00000568676 NOP56O00567 594 aaKnown RBP18.25■□□□□ 0.51
HERPUD1-215ENST00000568676 ICAM3P32942 547 aa18.25■□□□□ 0.51
HERPUD1-215ENST00000568676 TRDNQ13061 729 aa18.25■□□□□ 0.51
HERPUD1-215ENST00000568676 SEC23AQ15436 765 aa18.25■□□□□ 0.51
HERPUD1-215ENST00000568676 EPC2Q52LR7 807 aa18.25■□□□□ 0.51
HERPUD1-215ENST00000568676 GADD45GIP1Q8TAE8 222 aaPredicted RBP18.25■□□□□ 0.51
HERPUD1-215ENST00000568676 YME1L1Q96TA2 773 aa18.25■□□□□ 0.51
HERPUD1-215ENST00000568676 RIOX1Q9H6W3 641 aa18.25■□□□□ 0.51
HERPUD1-215ENST00000568676 C11orf16Q9NQ32 467 aa18.25■□□□□ 0.51
HERPUD1-215ENST00000568676 MYH7BA7E2Y1 1941 aa18.24■□□□□ 0.51
HERPUD1-215ENST00000568676 GRXCR2A6NFK2 248 aa18.24■□□□□ 0.51
HERPUD1-215ENST00000568676 NCK2O43639 380 aa18.24■□□□□ 0.51
HERPUD1-215ENST00000568676 PPP1R11O60927 126 aaPredicted RBP18.24■□□□□ 0.51
HERPUD1-215ENST00000568676 LGALS2P05162 132 aa18.24■□□□□ 0.51
HERPUD1-215ENST00000568676 SMIM10L2AP0DMW4 78 aa18.24■□□□□ 0.51
HERPUD1-215ENST00000568676 SMIM10L2BP0DMW5 78 aa18.24■□□□□ 0.51
HERPUD1-215ENST00000568676 HOXA13P31271 388 aaPredicted RBP18.24■□□□□ 0.51
HERPUD1-215ENST00000568676 SP2Q02086 613 aa18.24■□□□□ 0.51
HERPUD1-215ENST00000568676 NUCB1Q02818 461 aa18.24■□□□□ 0.51
HERPUD1-215ENST00000568676 HIC1Q14526 733 aa18.24■□□□□ 0.51
HERPUD1-215ENST00000568676 PTCRAQ6ISU1 281 aaPredicted RBP18.24■□□□□ 0.51
HERPUD1-215ENST00000568676 METTL7BQ6UX53 244 aa18.24■□□□□ 0.51
HERPUD1-215ENST00000568676 NEK9Q8TD19 979 aa18.24■□□□□ 0.51
HERPUD1-215ENST00000568676 KHSRPQ92945 711 aaKnown RBP eCLIP18.24■□□□□ 0.51
HERPUD1-215ENST00000568676 CD320Q9NPF0 282 aa18.24■□□□□ 0.51
HERPUD1-215ENST00000568676 ZNF215Q9UL58 517 aaPredicted RBP18.24■□□□□ 0.51
HERPUD1-215ENST00000568676 MICAL3Q7RTP6 2002 aa18.23■□□□□ 0.51
HERPUD1-215ENST00000568676 ERICH2A1L162 156 aa18.23■□□□□ 0.51
HERPUD1-215ENST00000568676 BANK1Q8NDB2 785 aa18.23■□□□□ 0.51
HERPUD1-215ENST00000568676 PABPC5Q96DU9 382 aaKnown RBP18.23■□□□□ 0.51
HERPUD1-215ENST00000568676 INPP4AQ96PE3 977 aaPredicted RBP18.23■□□□□ 0.51
HERPUD1-215ENST00000568676 RNPEPQ9H4A4 650 aa18.23■□□□□ 0.51
HERPUD1-215ENST00000568676 PRKAG3Q9UGI9 489 aa18.23■□□□□ 0.51
HERPUD1-215ENST00000568676 FRMPD4Q14CM0 1322 aa18.23■□□□□ 0.51
HERPUD1-215ENST00000568676 PNMA6FA0A0J9YX94 578 aa18.22■□□□□ 0.51
HERPUD1-215ENST00000568676 TREHO43280 583 aa18.22■□□□□ 0.51
HERPUD1-215ENST00000568676 FIBPO43427 364 aa18.22■□□□□ 0.51
HERPUD1-215ENST00000568676 SSTR3P32745 418 aaPredicted RBP18.22■□□□□ 0.51
HERPUD1-215ENST00000568676 GPM6BQ13491 265 aa18.22■□□□□ 0.51
HERPUD1-215ENST00000568676 GRM4Q14833 912 aa18.22■□□□□ 0.51
HERPUD1-215ENST00000568676 COL19A1Q14993 1142 aa18.22■□□□□ 0.51
HERPUD1-215ENST00000568676 B4GALNT3Q6L9W6 998 aa18.22■□□□□ 0.51
HERPUD1-215ENST00000568676 XRRA1Q6P2D8 792 aa18.22■□□□□ 0.51
HERPUD1-215ENST00000568676 HOMER1Q86YM7 354 aa18.22■□□□□ 0.51
HERPUD1-215ENST00000568676 TMEM192Q8IY95 271 aa18.22■□□□□ 0.51
HERPUD1-215ENST00000568676 IL31RAQ8NI17 732 aa18.22■□□□□ 0.51
HERPUD1-215ENST00000568676 NSUN3Q9H649 340 aaKnown RBP18.22■□□□□ 0.51
HERPUD1-215ENST00000568676 RWDD3Q9Y3V2 267 aa18.22■□□□□ 0.51
HERPUD1-215ENST00000568676 BRWD1Q9NSI6 2320 aa18.21■□□□□ 0.51
HERPUD1-215ENST00000568676 SPATA31C2B4DYI2 1134 aa18.21■□□□□ 0.51
HERPUD1-215ENST00000568676 RB1P06400 928 aa18.21■□□□□ 0.51
HERPUD1-215ENST00000568676 IL9P15248 144 aa18.21■□□□□ 0.51
HERPUD1-215ENST00000568676 SART3Q15020 963 aaKnown RBP18.21■□□□□ 0.51
HERPUD1-215ENST00000568676 FAM26DQ5JW98 314 aa18.21■□□□□ 0.51
HERPUD1-215ENST00000568676 FCHSD1Q86WN1 690 aa18.21■□□□□ 0.51
HERPUD1-215ENST00000568676 GIMAP8Q8ND71 665 aaPredicted RBP18.21■□□□□ 0.51
HERPUD1-215ENST00000568676 PIGSQ96S52 555 aa18.21■□□□□ 0.51
HERPUD1-215ENST00000568676 SENP7Q9BQF6 1050 aa18.21■□□□□ 0.51
HERPUD1-215ENST00000568676 LMAN2LQ9H0V9 348 aa18.21■□□□□ 0.51
HERPUD1-215ENST00000568676 NRCAMQ92823 1304 aa18.21■□□□□ 0.51
HERPUD1-215ENST00000568676 SORBS3O60504 671 aa18.2■□□□□ 0.5
HERPUD1-215ENST00000568676 RPAINQ86UA6 219 aa18.2■□□□□ 0.5
HERPUD1-215ENST00000568676 GPR20Q99678 358 aa18.2■□□□□ 0.5
HERPUD1-215ENST00000568676 IFIH1Q9BYX4 1025 aaKnown RBP18.2■□□□□ 0.5
HERPUD1-215ENST00000568676 KCNH6Q9H252 994 aa18.2■□□□□ 0.5
HERPUD1-215ENST00000568676 U3KPZ7 1027 aaPredicted RBP18.2■□□□□ 0.5
HERPUD1-215ENST00000568676 LOC101059915A0A1B0GWI6 518 aaPredicted RBP18.19■□□□□ 0.5
HERPUD1-215ENST00000568676 FAM86C2PA6NEL3 165 aa18.19■□□□□ 0.5
HERPUD1-215ENST00000568676 C5orf67F2Z3F1 127 aa18.19■□□□□ 0.5
HERPUD1-215ENST00000568676 RPLP2P05387 115 aaKnown RBP18.19■□□□□ 0.5
HERPUD1-215ENST00000568676 ADAM17P78536 824 aa18.19■□□□□ 0.5
HERPUD1-215ENST00000568676 MRPS9P82933 396 aaKnown RBP18.19■□□□□ 0.5
HERPUD1-215ENST00000568676 CSPP1Q1MSJ5 1256 aa18.19■□□□□ 0.5
HERPUD1-215ENST00000568676 TAF2Q6P1X5 1199 aa18.19■□□□□ 0.5
HERPUD1-215ENST00000568676 CYB5R4Q7L1T6 521 aa18.19■□□□□ 0.5
HERPUD1-215ENST00000568676 CYFIP1Q7L576 1253 aa18.19■□□□□ 0.5
HERPUD1-215ENST00000568676 GPKOWQ92917 476 aaPredicted RBP eCLIP18.19■□□□□ 0.53e-11■■■■■ 35.9
HERPUD1-215ENST00000568676 IL17RAQ96F46 866 aa18.19■□□□□ 0.5
HERPUD1-215ENST00000568676 C11orf84Q9BUA3 381 aaPredicted RBP18.19■□□□□ 0.5
HERPUD1-215ENST00000568676 IFIT3O14879 490 aaKnown RBP18.18■□□□□ 0.5
HERPUD1-215ENST00000568676 DCXO43602 365 aa18.18■□□□□ 0.5
HERPUD1-215ENST00000568676 UPP2O95045 317 aa18.18■□□□□ 0.5
HERPUD1-215ENST00000568676 CTSHP09668 335 aa18.18■□□□□ 0.5
HERPUD1-215ENST00000568676 TROAPQ12815 778 aa18.18■□□□□ 0.5
HERPUD1-215ENST00000568676 PCNX4Q63HM2 1172 aa18.18■□□□□ 0.5
HERPUD1-215ENST00000568676 RSPH3Q86UC2 560 aa18.18■□□□□ 0.5
HERPUD1-215ENST00000568676 NLRX1Q86UT6 975 aa18.18■□□□□ 0.5
HERPUD1-215ENST00000568676 FIBCD1Q8N539 461 aa18.18■□□□□ 0.5
HERPUD1-215ENST00000568676 CUL5Q93034 780 aa18.18■□□□□ 0.5
HERPUD1-215ENST00000568676 UPF3BQ9BZI7 483 aaKnown RBP18.18■□□□□ 0.5
HERPUD1-215ENST00000568676 SETD4Q9NVD3 440 aa18.18■□□□□ 0.5
HERPUD1-215ENST00000568676 RALGAPA2Q2PPJ7 1873 aa18.18■□□□□ 0.5
HERPUD1-215ENST00000568676 CYTH3O43739 400 aa18.17■□□□□ 0.5
HERPUD1-215ENST00000568676 WTAPQ15007 396 aa18.17■□□□□ 0.5
HERPUD1-215ENST00000568676 TCEAL5Q5H9L2 206 aa18.17■□□□□ 0.5
HERPUD1-215ENST00000568676 CATIPQ7Z7H3 387 aa18.17■□□□□ 0.5
HERPUD1-215ENST00000568676 RALYLQ86SE5 291 aaKnown RBP18.17■□□□□ 0.5
HERPUD1-215ENST00000568676 LMBR1Q8WVP7 490 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms