RNA–Protein interactions for RNA: ENST00000568569.1

GTF3C1-209, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-209ENST00000568569 SMIM10L2BP0DMW5 78 aa13.73□□□□□ -0.21
GTF3C1-209ENST00000568569 ANKRD45Q5TZF3 282 aa13.73□□□□□ -0.21
GTF3C1-209ENST00000568569 STOX1Q6ZVD7 989 aa13.73□□□□□ -0.21
GTF3C1-209ENST00000568569 HFE2Q6ZVN8 426 aa13.73□□□□□ -0.21
GTF3C1-209ENST00000568569 RPAINQ86UA6 219 aa13.73□□□□□ -0.21
GTF3C1-209ENST00000568569 VSIG10LQ86VR7 867 aa13.73□□□□□ -0.21
GTF3C1-209ENST00000568569 APBB2Q92870 758 aa13.73□□□□□ -0.21
GTF3C1-209ENST00000568569 ZSCAN10Q96SZ4 725 aaPredicted RBP13.73□□□□□ -0.21
GTF3C1-209ENST00000568569 TUT1Q9H6E5 874 aaKnown RBP13.73□□□□□ -0.21
GTF3C1-209ENST00000568569 MLXIPQ9HAP2 919 aa13.73□□□□□ -0.21
GTF3C1-209ENST00000568569 VAT1LQ9HCJ6 419 aa13.73□□□□□ -0.21
GTF3C1-209ENST00000568569 MICAL3Q7RTP6 2002 aa13.73□□□□□ -0.21
GTF3C1-209ENST00000568569 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.72□□□□□ -0.21
GTF3C1-209ENST00000568569 TRIM6-TRIM34B2RNG4 842 aa13.72□□□□□ -0.21
GTF3C1-209ENST00000568569 TREHO43280 583 aa13.72□□□□□ -0.21
GTF3C1-209ENST00000568569 LGALS2P05162 132 aa13.72□□□□□ -0.21
GTF3C1-209ENST00000568569 GNAT1P11488 350 aa13.72□□□□□ -0.21
GTF3C1-209ENST00000568569 CTNNB1P35222 781 aa13.72□□□□□ -0.21
GTF3C1-209ENST00000568569 IRS1P35568 1242 aa13.72□□□□□ -0.21
GTF3C1-209ENST00000568569 SP2Q02086 613 aa13.72□□□□□ -0.21
GTF3C1-209ENST00000568569 PGM5Q15124 567 aa13.72□□□□□ -0.21
GTF3C1-209ENST00000568569 ENAHQ8N8S7 591 aaPredicted RBP13.72□□□□□ -0.21
GTF3C1-209ENST00000568569 MFSD14AQ96MC6 490 aa13.72□□□□□ -0.21
GTF3C1-209ENST00000568569 C11orf84Q9BUA3 381 aaPredicted RBP13.72□□□□□ -0.21
GTF3C1-209ENST00000568569 LMAN2LQ9H0V9 348 aa13.72□□□□□ -0.21
GTF3C1-209ENST00000568569 RWDD3Q9Y3V2 267 aa13.72□□□□□ -0.21
GTF3C1-209ENST00000568569 KIAA1217Q5T5P2 1943 aa13.71□□□□□ -0.21
GTF3C1-209ENST00000568569 B4E1Z4 1266 aa13.71□□□□□ -0.21
GTF3C1-209ENST00000568569 C5orf67F2Z3F1 127 aa13.71□□□□□ -0.21
GTF3C1-209ENST00000568569 NOP56O00567 594 aaKnown RBP13.71□□□□□ -0.21
GTF3C1-209ENST00000568569 RB1P06400 928 aa13.71□□□□□ -0.21
GTF3C1-209ENST00000568569 CCND2P30279 289 aa13.71□□□□□ -0.21
GTF3C1-209ENST00000568569 LTBRP36941 435 aa13.71□□□□□ -0.21
GTF3C1-209ENST00000568569 SMAD2Q15796 467 aaKnown RBP13.71□□□□□ -0.21
GTF3C1-209ENST00000568569 CTC1Q2NKJ3 1217 aa13.71□□□□□ -0.21
GTF3C1-209ENST00000568569 FIBCD1Q8N539 461 aa13.71□□□□□ -0.21
GTF3C1-209ENST00000568569 SAMD3Q8N6K7 520 aa13.71□□□□□ -0.21
GTF3C1-209ENST00000568569 IL31RAQ8NI17 732 aa13.71□□□□□ -0.21
GTF3C1-209ENST00000568569 IL17RAQ96F46 866 aa13.71□□□□□ -0.21
GTF3C1-209ENST00000568569 USP26Q9BXU7 913 aa13.71□□□□□ -0.21
GTF3C1-209ENST00000568569 RNPEPQ9H4A4 650 aa13.71□□□□□ -0.21
GTF3C1-209ENST00000568569 MUTYHQ9UIF7 546 aa13.71□□□□□ -0.21
GTF3C1-209ENST00000568569 MYO7AQ13402 2215 aa13.71□□□□□ -0.22
GTF3C1-209ENST00000568569 ZNF318Q5VUA4 2279 aa13.7□□□□□ -0.22
GTF3C1-209ENST00000568569 ZBTB5O15062 677 aa13.7□□□□□ -0.22
GTF3C1-209ENST00000568569 HOXA13P31271 388 aaPredicted RBP13.7□□□□□ -0.22
GTF3C1-209ENST00000568569 HYAL1Q12794 435 aa13.7□□□□□ -0.22
GTF3C1-209ENST00000568569 GNPTABQ3T906 1256 aa13.7□□□□□ -0.22
GTF3C1-209ENST00000568569 HERC4Q5GLZ8 1057 aaPredicted RBP13.7□□□□□ -0.22
GTF3C1-209ENST00000568569 DIEXFQ68CQ4 756 aaKnown RBP13.7□□□□□ -0.22
GTF3C1-209ENST00000568569 UBAC1Q9BSL1 405 aa13.7□□□□□ -0.22
GTF3C1-209ENST00000568569 OSBPL7Q9BZF2 842 aa13.7□□□□□ -0.22
GTF3C1-209ENST00000568569 PCDHA1Q9Y5I3 950 aa13.7□□□□□ -0.22
GTF3C1-209ENST00000568569 ADGRA3Q8IWK6 1321 aa13.69□□□□□ -0.22
GTF3C1-209ENST00000568569 MBTPS2O43462 519 aa13.69□□□□□ -0.22
GTF3C1-209ENST00000568569 PPP1R11O60927 126 aaPredicted RBP13.69□□□□□ -0.22
GTF3C1-209ENST00000568569 BMPR1AP36894 532 aa13.69□□□□□ -0.22
GTF3C1-209ENST00000568569 DLX2Q07687 328 aaPredicted RBP13.69□□□□□ -0.22
GTF3C1-209ENST00000568569 TRAF1Q13077 416 aa13.69□□□□□ -0.22
GTF3C1-209ENST00000568569 SMAD4Q13485 552 aaKnown RBP13.69□□□□□ -0.22
GTF3C1-209ENST00000568569 CLUL1Q15846 466 aa13.69□□□□□ -0.22
GTF3C1-209ENST00000568569 FAM26DQ5JW98 314 aa13.69□□□□□ -0.22
GTF3C1-209ENST00000568569 IFIT1BQ5T764 474 aaKnown RBP13.69□□□□□ -0.22
GTF3C1-209ENST00000568569 METTL7BQ6UX53 244 aa13.69□□□□□ -0.22
GTF3C1-209ENST00000568569 STAG2Q8N3U4 1231 aa13.69□□□□□ -0.22
GTF3C1-209ENST00000568569 GPKOWQ92917 476 aaPredicted RBP eCLIP13.69□□□□□ -0.22
GTF3C1-209ENST00000568569 RILPL2Q969X0 211 aa13.69□□□□□ -0.22
GTF3C1-209ENST00000568569 MTMR8Q96EF0 704 aa13.69□□□□□ -0.22
GTF3C1-209ENST00000568569 SETD4Q9NVD3 440 aa13.69□□□□□ -0.22
GTF3C1-209ENST00000568569 ZSWIM5Q9P217 1185 aa13.69□□□□□ -0.22
GTF3C1-209ENST00000568569 ZNF215Q9UL58 517 aaPredicted RBP13.69□□□□□ -0.22
GTF3C1-209ENST00000568569 USP34Q70CQ2 3546 aa13.68□□□□□ -0.22
GTF3C1-209ENST00000568569 KLRF2D3W0D1 207 aa13.68□□□□□ -0.22
GTF3C1-209ENST00000568569 GCOM1H8Y6P7 765 aaPredicted RBP13.68□□□□□ -0.22
GTF3C1-209ENST00000568569 GRM6O15303 877 aa13.68□□□□□ -0.22
GTF3C1-209ENST00000568569 TBX10O75333 385 aa13.68□□□□□ -0.22
GTF3C1-209ENST00000568569 STAM2O75886 525 aa13.68□□□□□ -0.22
GTF3C1-209ENST00000568569 LINC00271P0C7V0 271 aa13.68□□□□□ -0.22
GTF3C1-209ENST00000568569 POLR2MP0CAP2 368 aa13.68□□□□□ -0.22
GTF3C1-209ENST00000568569 NEDD9Q14511 834 aa13.68□□□□□ -0.22
GTF3C1-209ENST00000568569 RNF135Q8IUD6 432 aa13.68□□□□□ -0.22
GTF3C1-209ENST00000568569 CLP1Q92989 425 aaKnown RBP13.68□□□□□ -0.22
GTF3C1-209ENST00000568569 KRT23Q9C075 422 aa13.68□□□□□ -0.22
GTF3C1-209ENST00000568569 STXBP3O00186 592 aa13.67□□□□□ -0.22
GTF3C1-209ENST00000568569 MMP1P03956 469 aa13.67□□□□□ -0.22
GTF3C1-209ENST00000568569 GHRP10912 638 aa13.67□□□□□ -0.22
GTF3C1-209ENST00000568569 SDSP20132 328 aa13.67□□□□□ -0.22
GTF3C1-209ENST00000568569 ICAM3P32942 547 aa13.67□□□□□ -0.22
GTF3C1-209ENST00000568569 ADAM17P78536 824 aa13.67□□□□□ -0.22
GTF3C1-209ENST00000568569 ARHGAP4P98171 946 aa13.67□□□□□ -0.22
GTF3C1-209ENST00000568569 IMMTQ16891 758 aaKnown RBP13.67□□□□□ -0.22
GTF3C1-209ENST00000568569 TAF2Q6P1X5 1199 aa13.67□□□□□ -0.22
GTF3C1-209ENST00000568569 FCHSD1Q86WN1 690 aa13.67□□□□□ -0.22
GTF3C1-209ENST00000568569 TRIM50Q86XT4 487 aa13.67□□□□□ -0.22
GTF3C1-209ENST00000568569 HOMER1Q86YM7 354 aa13.67□□□□□ -0.22
GTF3C1-209ENST00000568569 LMBR1Q8WVP7 490 aa13.67□□□□□ -0.22
GTF3C1-209ENST00000568569 PPP2R3CQ969Q6 453 aa13.67□□□□□ -0.22
GTF3C1-209ENST00000568569 ZFP91Q96JP5 570 aaPredicted RBP13.67□□□□□ -0.22
GTF3C1-209ENST00000568569 INPP4AQ96PE3 977 aaPredicted RBP13.67□□□□□ -0.22
GTF3C1-209ENST00000568569 GPR20Q99678 358 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms