RNA–Protein interactions for RNA: ENST00000568561.5

NME3-211, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 1 (best)

Gene NME3, Length 813 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-211ENST00000568561 PNMA6FA0A0J9YX94 578 aa17.96■□□□□ 0.47
NME3-211ENST00000568561 ERICH2A1L162 156 aa17.96■□□□□ 0.47
NME3-211ENST00000568561 C17orf102A2RUQ5 167 aa17.96■□□□□ 0.47
NME3-211ENST00000568561 E7EWF7 191 aa17.96■□□□□ 0.47
NME3-211ENST00000568561 H3BRB1 525 aa17.96■□□□□ 0.47
NME3-211ENST00000568561 TREHO43280 583 aa17.96■□□□□ 0.47
NME3-211ENST00000568561 CHMLP26374 656 aa17.96■□□□□ 0.47
NME3-211ENST00000568561 ANTXR2P58335 489 aa17.96■□□□□ 0.47
NME3-211ENST00000568561 ERVK-21P61565 698 aa17.96■□□□□ 0.47
NME3-211ENST00000568561 SP4Q02446 784 aa17.96■□□□□ 0.47
NME3-211ENST00000568561 SEMA3FQ13275 785 aa17.96■□□□□ 0.47
NME3-211ENST00000568561 MYL10Q9BUA6 226 aa17.96■□□□□ 0.47
NME3-211ENST00000568561 TUT1Q9H6E5 874 aaKnown RBP17.96■□□□□ 0.47
NME3-211ENST00000568561 RTEL1Q9NZ71 1219 aa17.96■□□□□ 0.47
NME3-211ENST00000568561 U3KPZ7 1027 aaPredicted RBP17.96■□□□□ 0.47
NME3-211ENST00000568561 KAT6AQ92794 2004 aa17.96■□□□□ 0.47
NME3-211ENST00000568561 EMSYQ7Z589 1322 aa17.96■□□□□ 0.46
NME3-211ENST00000568561 NOP56O00567 594 aaKnown RBP17.95■□□□□ 0.46
NME3-211ENST00000568561 EFCAB14O75071 495 aa17.95■□□□□ 0.46
NME3-211ENST00000568561 MKRN4PQ13434 485 aaPredicted RBP17.95■□□□□ 0.46
NME3-211ENST00000568561 CYFIP1Q7L576 1253 aa17.95■□□□□ 0.46
NME3-211ENST00000568561 SAMD3Q8N6K7 520 aa17.95■□□□□ 0.46
NME3-211ENST00000568561 RNPEPQ9H4A4 650 aa17.95■□□□□ 0.46
NME3-211ENST00000568561 FRMPD4Q14CM0 1322 aa17.95■□□□□ 0.46
NME3-211ENST00000568561 ATG2AQ2TAZ0 1938 aa17.94■□□□□ 0.46
NME3-211ENST00000568561 AMHP03971 560 aa17.94■□□□□ 0.46
NME3-211ENST00000568561 TGFB3P10600 412 aa17.94■□□□□ 0.46
NME3-211ENST00000568561 HOXC8P31273 242 aa17.94■□□□□ 0.46
NME3-211ENST00000568561 GNPTABQ3T906 1256 aa17.94■□□□□ 0.46
NME3-211ENST00000568561 NCOA7Q8NI08 942 aa17.94■□□□□ 0.46
NME3-211ENST00000568561 KHSRPQ92945 711 aaKnown RBP eCLIP17.94■□□□□ 0.46
NME3-211ENST00000568561 INPP4AQ96PE3 977 aaPredicted RBP17.94■□□□□ 0.46
NME3-211ENST00000568561 EPHX3Q9H6B9 360 aa17.94■□□□□ 0.46
NME3-211ENST00000568561 SETD4Q9NVD3 440 aa17.94■□□□□ 0.46
NME3-211ENST00000568561 SUPT16HQ9Y5B9 1047 aaKnown RBP17.94■□□□□ 0.46
NME3-211ENST00000568561 MYO7AQ13402 2215 aa17.93■□□□□ 0.46
NME3-211ENST00000568561 TRAF1Q13077 416 aa17.93■□□□□ 0.46
NME3-211ENST00000568561 SART3Q15020 963 aaKnown RBP17.93■□□□□ 0.46
NME3-211ENST00000568561 PLEKHG4Q58EX7 1191 aa17.93■□□□□ 0.46
NME3-211ENST00000568561 UTP14CQ5TAP6 766 aaKnown RBP17.93■□□□□ 0.46
NME3-211ENST00000568561 USP17L6PQ6QN14 398 aa17.93■□□□□ 0.46
NME3-211ENST00000568561 CATIPQ7Z7H3 387 aa17.93■□□□□ 0.46
NME3-211ENST00000568561 MB21D2Q8IYB1 491 aaPredicted RBP17.93■□□□□ 0.46
NME3-211ENST00000568561 FBXO22Q8NEZ5 403 aa17.93■□□□□ 0.46
NME3-211ENST00000568561 RUFY2Q8WXA3 655 aa17.93■□□□□ 0.46
NME3-211ENST00000568561 GPR20Q99678 358 aa17.93■□□□□ 0.46
NME3-211ENST00000568561 INSL6Q9Y581 213 aa17.93■□□□□ 0.46
NME3-211ENST00000568561 SPATA31C2B4DYI2 1134 aa17.92■□□□□ 0.46
NME3-211ENST00000568561 UPP2O95045 317 aa17.92■□□□□ 0.46
NME3-211ENST00000568561 ICAM3P32942 547 aa17.92■□□□□ 0.46
NME3-211ENST00000568561 METTL7BQ6UX53 244 aa17.92■□□□□ 0.46
NME3-211ENST00000568561 SMARCC2Q8TAQ2 1214 aa17.92■□□□□ 0.46
NME3-211ENST00000568561 SEPT8Q92599 483 aa17.92■□□□□ 0.46
NME3-211ENST00000568561 C1QTNF1Q9BXJ1 281 aa17.92■□□□□ 0.46
NME3-211ENST00000568561 UBE2ZQ9H832 354 aaPredicted RBP17.92■□□□□ 0.46
NME3-211ENST00000568561 LMCD1Q9NZU5 365 aa17.92■□□□□ 0.46
NME3-211ENST00000568561 RALGAPA2Q2PPJ7 1873 aa17.91■□□□□ 0.46
NME3-211ENST00000568561 SGSM2O43147 1006 aa17.91■□□□□ 0.46
NME3-211ENST00000568561 FIBPO43427 364 aa17.91■□□□□ 0.46
NME3-211ENST00000568561 IRX6P78412 446 aaPredicted RBP17.91■□□□□ 0.46
NME3-211ENST00000568561 HTRA4P83105 476 aaPredicted RBP17.91■□□□□ 0.46
NME3-211ENST00000568561 COL9A3Q14050 684 aaPredicted RBP17.91■□□□□ 0.46
NME3-211ENST00000568561 NEDD9Q14511 834 aa17.91■□□□□ 0.46
NME3-211ENST00000568561 ZNF654Q8IZM8 581 aa17.91■□□□□ 0.46
NME3-211ENST00000568561 IGDCC4Q8TDY8 1250 aa17.91■□□□□ 0.46
NME3-211ENST00000568561 LMBR1Q8WVP7 490 aa17.91■□□□□ 0.46
NME3-211ENST00000568561 LY9Q9HBG7 655 aa17.91■□□□□ 0.46
NME3-211ENST00000568561 CD320Q9NPF0 282 aa17.91■□□□□ 0.46
NME3-211ENST00000568561 LOC101059915A0A1B0GWI6 518 aaPredicted RBP17.9■□□□□ 0.46
NME3-211ENST00000568561 PLEKHA8P1O95397 391 aa17.9■□□□□ 0.46
NME3-211ENST00000568561 KCNA5P22460 613 aa17.9■□□□□ 0.46
NME3-211ENST00000568561 ARHGAP4P98171 946 aa17.9■□□□□ 0.46
NME3-211ENST00000568561 RAB11FIP4Q86YS3 637 aa17.9■□□□□ 0.46
NME3-211ENST00000568561 CMTR1Q8N1G2 835 aaKnown RBP17.9■□□□□ 0.46
NME3-211ENST00000568561 CTCFLQ8NI51 663 aaPredicted RBP17.9■□□□□ 0.46
NME3-211ENST00000568561 SP7Q8TDD2 431 aaPredicted RBP17.9■□□□□ 0.46
NME3-211ENST00000568561 YME1L1Q96TA2 773 aa17.9■□□□□ 0.46
NME3-211ENST00000568561 USP26Q9BXU7 913 aa17.9■□□□□ 0.46
NME3-211ENST00000568561 RBM8AQ9Y5S9 174 aaKnown RBP17.9■□□□□ 0.46
NME3-211ENST00000568561 STAM2O75886 525 aa17.89■□□□□ 0.45
NME3-211ENST00000568561 RXRAP19793 462 aa17.89■□□□□ 0.45
NME3-211ENST00000568561 EPC2Q52LR7 807 aa17.89■□□□□ 0.45
NME3-211ENST00000568561 RRP36Q96EU6 259 aaKnown RBP17.89■□□□□ 0.45
NME3-211ENST00000568561 SPZ1Q9BXG8 430 aa17.89■□□□□ 0.45
NME3-211ENST00000568561 PKD2L1Q9P0L9 805 aa17.89■□□□□ 0.45
NME3-211ENST00000568561 ZNF215Q9UL58 517 aaPredicted RBP17.89■□□□□ 0.45
NME3-211ENST00000568561 COL4A6Q14031 1691 aa17.88■□□□□ 0.45
NME3-211ENST00000568561 hCG_1642624A0A1W2PR95 340 aa17.88■□□□□ 0.45
NME3-211ENST00000568561 FAM86C2PA6NEL3 165 aa17.88■□□□□ 0.45
NME3-211ENST00000568561 MEIS2O14770 477 aa17.88■□□□□ 0.45
NME3-211ENST00000568561 PRC1O43663 620 aa17.88■□□□□ 0.45
NME3-211ENST00000568561 DDAH1O94760 285 aa17.88■□□□□ 0.45
NME3-211ENST00000568561 PCNX4Q63HM2 1172 aa17.88■□□□□ 0.45
NME3-211ENST00000568561 RUFY4Q6ZNE9 571 aa17.88■□□□□ 0.45
NME3-211ENST00000568561 MAP4K1Q92918 833 aa17.88■□□□□ 0.45
NME3-211ENST00000568561 CUL5Q93034 780 aa17.88■□□□□ 0.45
NME3-211ENST00000568561 TOP1MTQ969P6 601 aa17.88■□□□□ 0.45
NME3-211ENST00000568561 LRFN3Q9BTN0 628 aa17.88■□□□□ 0.45
NME3-211ENST00000568561 IFIH1Q9BYX4 1025 aaKnown RBP17.88■□□□□ 0.45
NME3-211ENST00000568561 SEC63Q9UGP8 760 aaKnown RBP17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms