RNA–Protein interactions for RNA: ENST00000568219.5

PALB2-206, Transcript of partner and localizer of BRCA2, humanhuman

TSL 1 (best) BASIC

Gene PALB2, Length 3,963 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-206ENST00000568219 LONP2Q86WA8 852 aa11.89□□□□□ -0.51
PALB2-206ENST00000568219 LARP4BQ92615 738 aaKnown RBP11.89□□□□□ -0.51
PALB2-206ENST00000568219 LRRC27Q9C0I9 530 aa11.89□□□□□ -0.51
PALB2-206ENST00000568219 ECT2Q9H8V3 914 aa11.89□□□□□ -0.51
PALB2-206ENST00000568219 PANK4Q9NVE7 773 aa11.89□□□□□ -0.51
PALB2-206ENST00000568219 PCDHA4Q9UN74 947 aa11.89□□□□□ -0.51
PALB2-206ENST00000568219 POTEMA6NI47 508 aa11.89□□□□□ -0.51
PALB2-206ENST00000568219 CCT8L1PA6NM43 557 aa11.89□□□□□ -0.51
PALB2-206ENST00000568219 RASGRF2O14827 1237 aa11.89□□□□□ -0.51
PALB2-206ENST00000568219 CUL1Q13616 776 aa11.89□□□□□ -0.51
PALB2-206ENST00000568219 KCNB1Q14721 858 aa11.89□□□□□ -0.51
PALB2-206ENST00000568219 CRYMQ14894 314 aa11.89□□□□□ -0.51
PALB2-206ENST00000568219 CDC37Q16543 378 aaPredicted RBP11.89□□□□□ -0.51
PALB2-206ENST00000568219 TSNAXIP1Q2TAA8 658 aa11.89□□□□□ -0.51
PALB2-206ENST00000568219 REXO1Q8N1G1 1221 aaKnown RBP11.89□□□□□ -0.51
PALB2-206ENST00000568219 TBCKQ8TEA7 893 aa11.89□□□□□ -0.51
PALB2-206ENST00000568219 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.89□□□□□ -0.51
PALB2-206ENST00000568219 DYNLL2Q96FJ2 89 aa11.89□□□□□ -0.51
PALB2-206ENST00000568219 TRIM9Q9C026 710 aa11.89□□□□□ -0.51
PALB2-206ENST00000568219 ETNK1Q9HBU6 452 aa11.89□□□□□ -0.51
PALB2-206ENST00000568219 ARMCX3Q9UH62 379 aaPredicted RBP11.89□□□□□ -0.51
PALB2-206ENST00000568219 ATP6V0A2Q9Y487 856 aa11.89□□□□□ -0.51
PALB2-206ENST00000568219 USP17L3A6NCW0 530 aa11.88□□□□□ -0.51
PALB2-206ENST00000568219 USP17L4A6NCW7 530 aa11.88□□□□□ -0.51
PALB2-206ENST00000568219 EPHB6O15197 1021 aa11.88□□□□□ -0.51
PALB2-206ENST00000568219 QPCTQ16769 361 aa11.88□□□□□ -0.51
PALB2-206ENST00000568219 RASIP1Q5U651 963 aa11.88□□□□□ -0.51
PALB2-206ENST00000568219 USP17L1Q7RTZ2 530 aa11.88□□□□□ -0.51
PALB2-206ENST00000568219 GJA10Q969M2 543 aa11.88□□□□□ -0.51
PALB2-206ENST00000568219 XPO6Q96QU8 1125 aaKnown RBP11.88□□□□□ -0.51
PALB2-206ENST00000568219 SH3GL2Q99962 352 aa11.88□□□□□ -0.51
PALB2-206ENST00000568219 PLCB1Q9NQ66 1216 aa11.88□□□□□ -0.51
PALB2-206ENST00000568219 NOC2LQ9Y3T9 749 aaKnown RBP11.88□□□□□ -0.51
PALB2-206ENST00000568219 COL4A3BPQ9Y5P4 624 aa11.88□□□□□ -0.51
PALB2-206ENST00000568219 PDS5AQ29RF7 1337 aaKnown RBP11.88□□□□□ -0.51
PALB2-206ENST00000568219 A0A087X0T9 212 aa11.88□□□□□ -0.51
PALB2-206ENST00000568219 LRRC10BA6NIK2 292 aa11.88□□□□□ -0.51
PALB2-206ENST00000568219 FAM228BP0C875 321 aa11.88□□□□□ -0.51
PALB2-206ENST00000568219 ACTN1P12814 892 aa11.88□□□□□ -0.51
PALB2-206ENST00000568219 DR1Q01658 176 aa11.88□□□□□ -0.51
PALB2-206ENST00000568219 PREPLQ4J6C6 727 aaPredicted RBP11.88□□□□□ -0.51
PALB2-206ENST00000568219 ANKRD20A8PQ5CZ79 823 aa11.88□□□□□ -0.51
PALB2-206ENST00000568219 APTXQ7Z2E3 356 aaKnown RBP11.88□□□□□ -0.51
PALB2-206ENST00000568219 ARMC9Q7Z3E5 817 aa11.88□□□□□ -0.51
PALB2-206ENST00000568219 NEK8Q86SG6 692 aa11.88□□□□□ -0.51
PALB2-206ENST00000568219 MSL3Q8N5Y2 521 aaKnown RBP11.88□□□□□ -0.51
PALB2-206ENST00000568219 CCDC77Q9BR77 488 aa11.88□□□□□ -0.51
PALB2-206ENST00000568219 NUCKS1Q9H1E3 243 aaKnown RBP11.88□□□□□ -0.51
PALB2-206ENST00000568219 USH1CQ9Y6N9 552 aa11.88□□□□□ -0.51
PALB2-206ENST00000568219 LMTK2Q8IWU2 1503 aa11.88□□□□□ -0.51
PALB2-206ENST00000568219 ABCC12Q96J65 1359 aa11.88□□□□□ -0.51
PALB2-206ENST00000568219 FAM237AA0A1B0GTK4 181 aa11.88□□□□□ -0.51
PALB2-206ENST00000568219 CLIC2O15247 247 aa11.88□□□□□ -0.51
PALB2-206ENST00000568219 NR2F2P24468 414 aa11.88□□□□□ -0.51
PALB2-206ENST00000568219 ALDH3A1P30838 453 aa11.88□□□□□ -0.51
PALB2-206ENST00000568219 PLCB3Q01970 1234 aa11.88□□□□□ -0.51
PALB2-206ENST00000568219 EXOC3L4Q17RC7 722 aa11.88□□□□□ -0.51
PALB2-206ENST00000568219 LRRC34Q8IZ02 419 aa11.88□□□□□ -0.51
PALB2-206ENST00000568219 SLC17A8Q8NDX2 589 aa11.88□□□□□ -0.51
PALB2-206ENST00000568219 GLG1Q92896 1179 aa11.88□□□□□ -0.51
PALB2-206ENST00000568219 TCEAL9Q9UHQ7 104 aa11.88□□□□□ -0.51
PALB2-206ENST00000568219 NCAPD2Q15021 1401 aa11.88□□□□□ -0.51
PALB2-206ENST00000568219 LRRN2O75325 713 aa11.87□□□□□ -0.51
PALB2-206ENST00000568219 XRCC5P13010 732 aaKnown RBP11.87□□□□□ -0.51
PALB2-206ENST00000568219 KRT15P19012 456 aa11.87□□□□□ -0.51
PALB2-206ENST00000568219 FGFR4P22455 802 aa11.87□□□□□ -0.51
PALB2-206ENST00000568219 STAT1P42224 750 aa11.87□□□□□ -0.51
PALB2-206ENST00000568219 MESDQ14696 234 aa11.87□□□□□ -0.51
PALB2-206ENST00000568219 PRCCQ92733 491 aaPredicted RBP11.87□□□□□ -0.51
PALB2-206ENST00000568219 DDX12PQ92771 950 aa11.87□□□□□ -0.51
PALB2-206ENST00000568219 MTUS1Q9ULD2 1270 aa11.87□□□□□ -0.51
PALB2-206ENST00000568219 TCP11X1B4DZS4 312 aa11.87□□□□□ -0.51
PALB2-206ENST00000568219 DNM1LO00429 736 aa11.87□□□□□ -0.51
PALB2-206ENST00000568219 SKOR1P84550 965 aa11.87□□□□□ -0.51
PALB2-206ENST00000568219 UAP1Q16222 522 aaPredicted RBP11.87□□□□□ -0.51
PALB2-206ENST00000568219 SEL1L2Q5TEA6 688 aa11.87□□□□□ -0.51
PALB2-206ENST00000568219 KLHDC7AQ5VTJ3 777 aa11.87□□□□□ -0.51
PALB2-206ENST00000568219 ARL6IP4Q66PJ3 421 aaKnown RBP11.87□□□□□ -0.51
PALB2-206ENST00000568219 TTI2Q6NXR4 508 aa11.87□□□□□ -0.51
PALB2-206ENST00000568219 PDXDC2PQ6P474 469 aa11.87□□□□□ -0.51
PALB2-206ENST00000568219 GPBP1Q86WP2 473 aa11.87□□□□□ -0.51
PALB2-206ENST00000568219 MAPKAPK5Q8IW41 473 aa11.87□□□□□ -0.51
PALB2-206ENST00000568219 PPFIBP2Q8ND30 876 aa11.87□□□□□ -0.51
PALB2-206ENST00000568219 STMN2Q93045 179 aa11.87□□□□□ -0.51
PALB2-206ENST00000568219 CALR3Q96L12 384 aaKnown RBP11.87□□□□□ -0.51
PALB2-206ENST00000568219 NAP1L3Q99457 506 aaPredicted RBP11.87□□□□□ -0.51
PALB2-206ENST00000568219 OSBPL1AQ9BXW6 950 aa11.87□□□□□ -0.51
PALB2-206ENST00000568219 CNOT10Q9H9A5 744 aaKnown RBP11.87□□□□□ -0.51
PALB2-206ENST00000568219 FAM114A2Q9NRY5 505 aa11.87□□□□□ -0.51
PALB2-206ENST00000568219 KIAA1024Q9UPX6 916 aa11.87□□□□□ -0.51
PALB2-206ENST00000568219 PIK3C2BO00750 1634 aa11.87□□□□□ -0.51
PALB2-206ENST00000568219 PPLO60437 1756 aa11.87□□□□□ -0.51
PALB2-206ENST00000568219 IGF2BP3O00425 579 aaKnown RBP eCLIP11.87□□□□□ -0.51
PALB2-206ENST00000568219 FOXP2O15409 715 aa11.87□□□□□ -0.51
PALB2-206ENST00000568219 SHOX2O60902 331 aaPredicted RBP11.87□□□□□ -0.51
PALB2-206ENST00000568219 USP17L8P0C7I0 530 aa11.87□□□□□ -0.51
PALB2-206ENST00000568219 ITGA4P13612 1032 aa11.87□□□□□ -0.51
PALB2-206ENST00000568219 PICALMQ13492 652 aa11.87□□□□□ -0.51
PALB2-206ENST00000568219 IRF2BP1Q8IU81 584 aa11.87□□□□□ -0.51
PALB2-206ENST00000568219 ELOA2Q8IYF1 753 aaPredicted RBP11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms