RNA–Protein interactions for RNA: ENST00000564540.5

UBR1-205, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-205ENST00000564540 MTDHQ86UE4 582 aaKnown RBP7.4□□□□□ -1.22
UBR1-205ENST00000564540 SP8Q8IXZ3 490 aa7.4□□□□□ -1.22
UBR1-205ENST00000564540 ZDHHC14Q8IZN3 488 aa7.4□□□□□ -1.22
UBR1-205ENST00000564540 KISS1RQ969F8 398 aaPredicted RBP7.4□□□□□ -1.22
UBR1-205ENST00000564540 C20orf173Q96LM9 149 aa7.4□□□□□ -1.22
UBR1-205ENST00000564540 ALG1Q9BT22 464 aa7.4□□□□□ -1.22
UBR1-205ENST00000564540 LUC7LQ9NQ29 371 aaKnown RBP7.4□□□□□ -1.22
UBR1-205ENST00000564540 PCDHA8Q9Y5H6 950 aa7.4□□□□□ -1.22
UBR1-205ENST00000564540 A0A0G2JLL6 359 aaPredicted RBP7.39□□□□□ -1.23
UBR1-205ENST00000564540 FAM47E-STBD1D6RA91 191 aa7.39□□□□□ -1.23
UBR1-205ENST00000564540 MAFKO60675 156 aa7.39□□□□□ -1.23
UBR1-205ENST00000564540 LRG1P02750 347 aa7.39□□□□□ -1.23
UBR1-205ENST00000564540 LTFP02788 710 aa7.39□□□□□ -1.23
UBR1-205ENST00000564540 NKX3-2P78367 333 aa7.39□□□□□ -1.23
UBR1-205ENST00000564540 GRIN1Q05586 938 aa7.39□□□□□ -1.23
UBR1-205ENST00000564540 BMS1Q14692 1282 aaKnown RBP7.39□□□□□ -1.23
UBR1-205ENST00000564540 LONRF2Q1L5Z9 754 aa7.39□□□□□ -1.23
UBR1-205ENST00000564540 TEPPQ6URK8 271 aa7.39□□□□□ -1.23
UBR1-205ENST00000564540 CARFQ8N187 725 aa7.39□□□□□ -1.23
UBR1-205ENST00000564540 LILRB2Q8N423 598 aa7.39□□□□□ -1.23
UBR1-205ENST00000564540 PHOSPHO1Q8TCT1 267 aa7.39□□□□□ -1.23
UBR1-205ENST00000564540 CLEC4DQ8WXI8 215 aa7.39□□□□□ -1.23
UBR1-205ENST00000564540 RBPJLQ9UBG7 517 aa7.39□□□□□ -1.23
UBR1-205ENST00000564540 AQP7O14520 342 aa7.38□□□□□ -1.23
UBR1-205ENST00000564540 THBS2P35442 1172 aa7.38□□□□□ -1.23
UBR1-205ENST00000564540 KCNC1P48547 511 aa7.38□□□□□ -1.23
UBR1-205ENST00000564540 GUCY1A3Q02108 690 aa7.38□□□□□ -1.23
UBR1-205ENST00000564540 SPIRE1Q08AE8 756 aa7.38□□□□□ -1.23
UBR1-205ENST00000564540 ADAM9Q13443 819 aa7.38□□□□□ -1.23
UBR1-205ENST00000564540 HABP4Q5JVS0 413 aaKnown RBP7.38□□□□□ -1.23
UBR1-205ENST00000564540 CYP4F22Q6NT55 531 aa7.38□□□□□ -1.23
UBR1-205ENST00000564540 KYQ8NBH2 561 aa7.38□□□□□ -1.23
UBR1-205ENST00000564540 UHMK1Q8TAS1 419 aaKnown RBP7.38□□□□□ -1.23
UBR1-205ENST00000564540 KRTAP9-8Q9BYQ0 159 aa7.38□□□□□ -1.23
UBR1-205ENST00000564540 NTMQ9P121 344 aa7.38□□□□□ -1.23
UBR1-205ENST00000564540 WASF3Q9UPY6 502 aa7.38□□□□□ -1.23
UBR1-205ENST00000564540 CDK11AQ9UQ88 783 aaPredicted RBP7.38□□□□□ -1.23
UBR1-205ENST00000564540 TELO2Q9Y4R8 837 aa7.38□□□□□ -1.23
UBR1-205ENST00000564540 PCDHA9Q9Y5H5 950 aa7.38□□□□□ -1.23
UBR1-205ENST00000564540 SMARCA5O60264 1052 aaPredicted RBP7.37□□□□□ -1.23
UBR1-205ENST00000564540 GABREP78334 506 aa7.37□□□□□ -1.23
UBR1-205ENST00000564540 PAK1Q13153 545 aa7.37□□□□□ -1.23
UBR1-205ENST00000564540 TUSC3Q13454 348 aa7.37□□□□□ -1.23
UBR1-205ENST00000564540 JMYQ8N9B5 988 aa7.37□□□□□ -1.23
UBR1-205ENST00000564540 PCDH19Q8TAB3 1148 aa7.37□□□□□ -1.23
UBR1-205ENST00000564540 ZSWIM3Q96MP5 696 aa7.37□□□□□ -1.23
UBR1-205ENST00000564540 PCDH18Q9HCL0 1135 aa7.37□□□□□ -1.23
UBR1-205ENST00000564540 NGRNQ9NPE2 291 aaKnown RBP7.37□□□□□ -1.23
UBR1-205ENST00000564540 DSEQ9UL01 958 aa7.37□□□□□ -1.23
UBR1-205ENST00000564540 TCRBV5S4A2TA0A5A2 114 aa7.36□□□□□ -1.23
UBR1-205ENST00000564540 CRTAMO95727 393 aa7.36□□□□□ -1.23
UBR1-205ENST00000564540 SRGAP2CP0DJJ0 459 aa7.36□□□□□ -1.23
UBR1-205ENST00000564540 SARSP49591 514 aaKnown RBP7.36□□□□□ -1.23
UBR1-205ENST00000564540 TTLL7Q6ZT98 887 aa7.36□□□□□ -1.23
UBR1-205ENST00000564540 TRIM48Q8IWZ4 208 aa7.36□□□□□ -1.23
UBR1-205ENST00000564540 THAP3Q8WTV1 239 aaPredicted RBP7.36□□□□□ -1.23
UBR1-205ENST00000564540 DRC1Q96MC2 740 aa7.36□□□□□ -1.23
UBR1-205ENST00000564540 CD244Q9BZW8 370 aa7.36□□□□□ -1.23
UBR1-205ENST00000564540 ADAM7Q9H2U9 754 aa7.36□□□□□ -1.23
UBR1-205ENST00000564540 SLC52A2Q9HAB3 445 aa7.36□□□□□ -1.23
UBR1-205ENST00000564540 NDOR1Q9UHB4 597 aa7.36□□□□□ -1.23
UBR1-205ENST00000564540 PTCH2Q9Y6C5 1203 aa7.36□□□□□ -1.23
UBR1-205ENST00000564540 ARVCFO00192 962 aa7.35□□□□□ -1.23
UBR1-205ENST00000564540 RTP5Q14D33 572 aa7.35□□□□□ -1.23
UBR1-205ENST00000564540 C2orf27AQ580R0 203 aa7.35□□□□□ -1.23
UBR1-205ENST00000564540 ZC3H12BQ5HYM0 836 aaKnown RBP7.35□□□□□ -1.23
UBR1-205ENST00000564540 NT5DC1Q5TFE4 455 aa7.35□□□□□ -1.23
UBR1-205ENST00000564540 TMC5Q6UXY8 1006 aa7.35□□□□□ -1.23
UBR1-205ENST00000564540 TTLL6Q8N841 843 aa7.35□□□□□ -1.23
UBR1-205ENST00000564540 SH3RF2Q8TEC5 729 aa7.35□□□□□ -1.23
UBR1-205ENST00000564540 ZSWIM4Q9H7M6 989 aa7.35□□□□□ -1.23
UBR1-205ENST00000564540 PYGMP11217 842 aa7.34□□□□□ -1.23
UBR1-205ENST00000564540 RPL13P26373 211 aaKnown RBP7.34□□□□□ -1.23
UBR1-205ENST00000564540 PRR31Q5SQ13 230 aa7.34□□□□□ -1.23
UBR1-205ENST00000564540 PNPLA5Q7Z6Z6 429 aaPredicted RBP7.34□□□□□ -1.23
UBR1-205ENST00000564540 ZNF761Q86XN6 746 aaPredicted RBP7.34□□□□□ -1.23
UBR1-205ENST00000564540 PROSER1Q86XN7 944 aa7.34□□□□□ -1.23
UBR1-205ENST00000564540 ZSWIM2Q8NEG5 633 aa7.34□□□□□ -1.23
UBR1-205ENST00000564540 TTLL11Q8NHH1 800 aa7.34□□□□□ -1.23
UBR1-205ENST00000564540 SLC7A14Q8TBB6 771 aa7.34□□□□□ -1.23
UBR1-205ENST00000564540 RELTQ969Z4 430 aa7.34□□□□□ -1.23
UBR1-205ENST00000564540 LNPKQ9C0E8 428 aa7.34□□□□□ -1.23
UBR1-205ENST00000564540 CATSPERZQ9NTU4 200 aa7.34□□□□□ -1.23
UBR1-205ENST00000564540 CBLCQ9ULV8 474 aa7.34□□□□□ -1.23
UBR1-205ENST00000564540 LOC101059915A0A1B0GWI6 518 aaPredicted RBP7.33□□□□□ -1.24
UBR1-205ENST00000564540 WNT9AO14904 365 aa7.33□□□□□ -1.24
UBR1-205ENST00000564540 RASGRP1O95267 797 aa7.33□□□□□ -1.24
UBR1-205ENST00000564540 NFE2L2Q16236 605 aa7.33□□□□□ -1.24
UBR1-205ENST00000564540 CCDC144BQ3MJ40 725 aa7.33□□□□□ -1.24
UBR1-205ENST00000564540 PAN2Q504Q3 1202 aaKnown RBP7.33□□□□□ -1.24
UBR1-205ENST00000564540 PHF19Q5T6S3 580 aa7.33□□□□□ -1.24
UBR1-205ENST00000564540 KCTD1Q719H9 257 aa7.33□□□□□ -1.24
UBR1-205ENST00000564540 OSTM1Q86WC4 334 aa7.33□□□□□ -1.24
UBR1-205ENST00000564540 ADAMTS17Q8TE56 1095 aa7.33□□□□□ -1.24
UBR1-205ENST00000564540 UBXN4Q92575 508 aa7.33□□□□□ -1.24
UBR1-205ENST00000564540 FBXW5Q969U6 566 aa7.33□□□□□ -1.24
UBR1-205ENST00000564540 KANSL2Q9H9L4 492 aa7.33□□□□□ -1.24
UBR1-205ENST00000564540 DDX3XO00571 662 aaKnown RBP eCLIP7.32□□□□□ -1.24
UBR1-205ENST00000564540 NOBOXO60393 691 aa7.32□□□□□ -1.24
UBR1-205ENST00000564540 AMY2AP04746 511 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms