RNA–Protein interactions for RNA: ENST00000564272.1

SHCBP1-203, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 530 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-203ENST00000564272 PBX2P40425 430 aa22.89■■□□□ 1.25
SHCBP1-203ENST00000564272 ZNF200P98182 395 aaPredicted RBP22.89■■□□□ 1.25
SHCBP1-203ENST00000564272 HIC1Q14526 733 aa22.89■■□□□ 1.25
SHCBP1-203ENST00000564272 TRIM50Q86XT4 487 aa22.89■■□□□ 1.25
SHCBP1-203ENST00000564272 CCDC155Q8N6L0 562 aa22.89■■□□□ 1.25
SHCBP1-203ENST00000564272 MTIF3Q9H2K0 278 aaKnown RBP22.89■■□□□ 1.25
SHCBP1-203ENST00000564272 PKD2L1Q9P0L9 805 aa22.89■■□□□ 1.25
SHCBP1-203ENST00000564272 UBIAD1Q9Y5Z9 338 aa22.89■■□□□ 1.25
SHCBP1-203ENST00000564272 SMCO2A6NFE2 343 aa22.88■■□□□ 1.25
SHCBP1-203ENST00000564272 ATP9AO75110 1047 aa22.88■■□□□ 1.25
SHCBP1-203ENST00000564272 CENPBP07199 599 aaPredicted RBP22.88■■□□□ 1.25
SHCBP1-203ENST00000564272 PFKMP08237 780 aa22.88■■□□□ 1.25
SHCBP1-203ENST00000564272 KCNA2P16389 499 aa22.88■■□□□ 1.25
SHCBP1-203ENST00000564272 PFKFB3Q16875 520 aaPredicted RBP22.88■■□□□ 1.25
SHCBP1-203ENST00000564272 RUFY3Q7L099 469 aa22.88■■□□□ 1.25
SHCBP1-203ENST00000564272 CAGE1Q8TC20 777 aa22.88■■□□□ 1.25
SHCBP1-203ENST00000564272 WNT8BQ93098 351 aa22.88■■□□□ 1.25
SHCBP1-203ENST00000564272 SENP7Q9BQF6 1050 aa22.88■■□□□ 1.25
SHCBP1-203ENST00000564272 PBX4Q9BYU1 374 aa22.88■■□□□ 1.25
SHCBP1-203ENST00000564272 EHMT1Q9H9B1 1298 aa22.88■■□□□ 1.25
SHCBP1-203ENST00000564272 TMEM260Q9NX78 707 aa22.88■■□□□ 1.25
SHCBP1-203ENST00000564272 ZBBXA8MT70 800 aa22.87■■□□□ 1.25
SHCBP1-203ENST00000564272 H3BRB1 525 aa22.87■■□□□ 1.25
SHCBP1-203ENST00000564272 PPFIA3O75145 1194 aa22.87■■□□□ 1.25
SHCBP1-203ENST00000564272 SCG2P13521 617 aa22.87■■□□□ 1.25
SHCBP1-203ENST00000564272 RFC2P35250 354 aa22.87■■□□□ 1.25
SHCBP1-203ENST00000564272 MTMR1Q13613 665 aa22.87■■□□□ 1.25
SHCBP1-203ENST00000564272 TOB2Q14106 344 aaPredicted RBP22.87■■□□□ 1.25
SHCBP1-203ENST00000564272 PHKBQ93100 1093 aa22.87■■□□□ 1.25
SHCBP1-203ENST00000564272 TIFAQ96CG3 184 aa22.87■■□□□ 1.25
SHCBP1-203ENST00000564272 CDX2Q99626 313 aaPredicted RBP22.87■■□□□ 1.25
SHCBP1-203ENST00000564272 ANO3Q9BYT9 981 aa22.87■■□□□ 1.25
SHCBP1-203ENST00000564272 TUT1Q9H6E5 874 aaKnown RBP22.87■■□□□ 1.25
SHCBP1-203ENST00000564272 ZSWIM6Q9HCJ5 1215 aa22.87■■□□□ 1.25
SHCBP1-203ENST00000564272 GBF1Q92538 1859 aa22.86■■□□□ 1.25
SHCBP1-203ENST00000564272 TMEM265A0A087WTH1 108 aa22.86■■□□□ 1.25
SHCBP1-203ENST00000564272 RBAK-RBAKDNI3L0D1 243 aa22.86■■□□□ 1.25
SHCBP1-203ENST00000564272 PTK7Q13308 1070 aa22.86■■□□□ 1.25
SHCBP1-203ENST00000564272 UTP14CQ5TAP6 766 aaKnown RBP22.86■■□□□ 1.25
SHCBP1-203ENST00000564272 AFAP1L1Q8TED9 768 aa22.86■■□□□ 1.25
SHCBP1-203ENST00000564272 CDHR1Q96JP9 859 aa22.86■■□□□ 1.25
SHCBP1-203ENST00000564272 UPF3BQ9BZI7 483 aaKnown RBP22.86■■□□□ 1.25
SHCBP1-203ENST00000564272 NCOA5Q9HCD5 579 aaKnown RBP22.86■■□□□ 1.25
SHCBP1-203ENST00000564272 JADE2Q9NQC1 790 aa22.86■■□□□ 1.25
SHCBP1-203ENST00000564272 TET1Q8NFU7 2136 aa22.85■■□□□ 1.25
SHCBP1-203ENST00000564272 SMIM10L2AP0DMW4 78 aa22.85■■□□□ 1.25
SHCBP1-203ENST00000564272 SMIM10L2BP0DMW5 78 aa22.85■■□□□ 1.25
SHCBP1-203ENST00000564272 SELPP16109 830 aa22.85■■□□□ 1.25
SHCBP1-203ENST00000564272 PDIA3P30101 505 aaKnown RBP22.85■■□□□ 1.25
SHCBP1-203ENST00000564272 CCT2P78371 535 aaKnown RBP22.85■■□□□ 1.25
SHCBP1-203ENST00000564272 RBL2Q08999 1139 aa22.85■■□□□ 1.25
SHCBP1-203ENST00000564272 PKN1Q16512 942 aa22.85■■□□□ 1.25
SHCBP1-203ENST00000564272 TRIM71Q2Q1W2 868 aaKnown RBP22.85■■□□□ 1.25
SHCBP1-203ENST00000564272 LRRC8DQ7L1W4 858 aa22.85■■□□□ 1.25
SHCBP1-203ENST00000564272 GIMAP8Q8ND71 665 aaPredicted RBP22.85■■□□□ 1.25
SHCBP1-203ENST00000564272 FTOQ9C0B1 505 aaKnown RBP eCLIP22.85■■□□□ 1.25
SHCBP1-203ENST00000564272 CYP46A1Q9Y6A2 500 aa22.85■■□□□ 1.25
SHCBP1-203ENST00000564272 SLC4A7Q9Y6M7 1214 aa22.85■■□□□ 1.25
SHCBP1-203ENST00000564272 ADAMTS3O15072 1205 aa22.84■■□□□ 1.25
SHCBP1-203ENST00000564272 PRPF3O43395 683 aaKnown RBP22.84■■□□□ 1.25
SHCBP1-203ENST00000564272 FOSP01100 380 aaPredicted RBP22.84■■□□□ 1.25
SHCBP1-203ENST00000564272 CKBP12277 381 aa22.84■■□□□ 1.25
SHCBP1-203ENST00000564272 CLK2P49760 499 aaKnown RBP22.84■■□□□ 1.25
SHCBP1-203ENST00000564272 EVCP57679 992 aa22.84■■□□□ 1.25
SHCBP1-203ENST00000564272 GPNMBQ14956 572 aa22.84■■□□□ 1.25
SHCBP1-203ENST00000564272 NTRK3Q16288 839 aa22.84■■□□□ 1.25
SHCBP1-203ENST00000564272 TEX2Q8IWB9 1127 aa22.84■■□□□ 1.25
SHCBP1-203ENST00000564272 CYP2W1Q8TAV3 490 aa22.84■■□□□ 1.25
SHCBP1-203ENST00000564272 MYLIPQ8WY64 445 aa22.84■■□□□ 1.25
SHCBP1-203ENST00000564272 COL6A3P12111 3177 aa22.84■■□□□ 1.25
SHCBP1-203ENST00000564272 C17orf102A2RUQ5 167 aa22.83■■□□□ 1.25
SHCBP1-203ENST00000564272 HOXC8P31273 242 aa22.83■■□□□ 1.25
SHCBP1-203ENST00000564272 TCF7P36402 384 aaPredicted RBP22.83■■□□□ 1.25
SHCBP1-203ENST00000564272 RABGGTBP53611 331 aa22.83■■□□□ 1.25
SHCBP1-203ENST00000564272 AP3B2Q13367 1082 aa22.83■■□□□ 1.25
SHCBP1-203ENST00000564272 JAKMIP3Q5VZ66 844 aa22.83■■□□□ 1.25
SHCBP1-203ENST00000564272 MXRA8Q9BRK3 442 aa22.83■■□□□ 1.25
SHCBP1-203ENST00000564272 LARP6Q9BRS8 491 aaKnown RBP22.83■■□□□ 1.25
SHCBP1-203ENST00000564272 SLC26A6Q9BXS9 759 aa22.83■■□□□ 1.25
SHCBP1-203ENST00000564272 TM6SF1Q9BZW5 370 aa22.83■■□□□ 1.25
SHCBP1-203ENST00000564272 GLT8D2Q9H1C3 349 aa22.83■■□□□ 1.25
SHCBP1-203ENST00000564272 ZNF215Q9UL58 517 aaPredicted RBP22.83■■□□□ 1.25
SHCBP1-203ENST00000564272 ACTN1P12814 892 aa22.82■■□□□ 1.24
SHCBP1-203ENST00000564272 SREBF1P36956 1147 aa22.82■■□□□ 1.24
SHCBP1-203ENST00000564272 RAB30Q15771 203 aa22.82■■□□□ 1.24
SHCBP1-203ENST00000564272 TRAF7Q6Q0C0 670 aa22.82■■□□□ 1.24
SHCBP1-203ENST00000564272 SERINC5Q86VE9 423 aa22.82■■□□□ 1.24
SHCBP1-203ENST00000564272 ATP6V0A1Q93050 837 aa22.82■■□□□ 1.24
SHCBP1-203ENST00000564272 NKX2-4Q9H2Z4 354 aa22.82■■□□□ 1.24
SHCBP1-203ENST00000564272 ZNF576Q9H609 170 aa22.82■■□□□ 1.24
SHCBP1-203ENST00000564272 KCNH7Q9NS40 1196 aa22.82■■□□□ 1.24
SHCBP1-203ENST00000564272 YBX2Q9Y2T7 364 aaKnown RBP22.82■■□□□ 1.24
SHCBP1-203ENST00000564272 GSTTP1A0A1W2PQM5 241 aa22.81■■□□□ 1.24
SHCBP1-203ENST00000564272 ESYT2A0FGR8 921 aa22.81■■□□□ 1.24
SHCBP1-203ENST00000564272 TREHO43280 583 aa22.81■■□□□ 1.24
SHCBP1-203ENST00000564272 NBNO60934 754 aa22.81■■□□□ 1.24
SHCBP1-203ENST00000564272 ATP2A2P16615 1042 aaKnown RBP22.81■■□□□ 1.24
SHCBP1-203ENST00000564272 IFNAR1P17181 557 aa22.81■■□□□ 1.24
SHCBP1-203ENST00000564272 AKAP17AQ02040 695 aaKnown RBP22.81■■□□□ 1.24
SHCBP1-203ENST00000564272 GRIN2CQ14957 1233 aa22.81■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms