RNA–Protein interactions for RNA: ENST00000563498.1

NME3-204, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2 BASIC

Gene NME3, Length 920 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-204ENST00000563498 LGALS2P05162 132 aa21.63■■□□□ 1.05
NME3-204ENST00000563498 SMIM10L2AP0DMW4 78 aa21.63■■□□□ 1.05
NME3-204ENST00000563498 SMIM10L2BP0DMW5 78 aa21.63■■□□□ 1.05
NME3-204ENST00000563498 TRDNQ13061 729 aa21.63■■□□□ 1.05
NME3-204ENST00000563498 SLC35G1Q2M3R5 365 aa21.63■■□□□ 1.05
NME3-204ENST00000563498 GNPTABQ3T906 1256 aa21.63■■□□□ 1.05
NME3-204ENST00000563498 HOMER1Q86YM7 354 aa21.63■■□□□ 1.05
NME3-204ENST00000563498 SEPT8Q92599 483 aa21.63■■□□□ 1.05
NME3-204ENST00000563498 GPKOWQ92917 476 aaPredicted RBP eCLIP21.63■■□□□ 1.05
NME3-204ENST00000563498 KHSRPQ92945 711 aaKnown RBP eCLIP21.63■■□□□ 1.05
NME3-204ENST00000563498 MRPL38Q96DV4 380 aaKnown RBP21.63■■□□□ 1.05
NME3-204ENST00000563498 PIGSQ96S52 555 aa21.63■■□□□ 1.05
NME3-204ENST00000563498 USP26Q9BXU7 913 aa21.63■■□□□ 1.05
NME3-204ENST00000563498 PNMA6FA0A0J9YX94 578 aa21.62■■□□□ 1.05
NME3-204ENST00000563498 ICAM3P32942 547 aa21.62■■□□□ 1.05
NME3-204ENST00000563498 NEDD9Q14511 834 aa21.62■■□□□ 1.05
NME3-204ENST00000563498 PTPROQ16827 1216 aa21.62■■□□□ 1.05
NME3-204ENST00000563498 METTL7BQ6UX53 244 aa21.62■■□□□ 1.05
NME3-204ENST00000563498 FCHSD1Q86WN1 690 aa21.62■■□□□ 1.05
NME3-204ENST00000563498 TOP1MTQ969P6 601 aa21.62■■□□□ 1.05
NME3-204ENST00000563498 INPP4AQ96PE3 977 aaPredicted RBP21.62■■□□□ 1.05
NME3-204ENST00000563498 IL25Q9H293 177 aa21.62■■□□□ 1.05
NME3-204ENST00000563498 RNPEPQ9H4A4 650 aa21.62■■□□□ 1.05
NME3-204ENST00000563498 CD320Q9NPF0 282 aa21.62■■□□□ 1.05
NME3-204ENST00000563498 C11orf16Q9NQ32 467 aa21.62■■□□□ 1.05
NME3-204ENST00000563498 NOP56O00567 594 aaKnown RBP21.61■■□□□ 1.05
NME3-204ENST00000563498 TREHO43280 583 aa21.61■■□□□ 1.05
NME3-204ENST00000563498 GNAT1P11488 350 aa21.61■■□□□ 1.05
NME3-204ENST00000563498 KCNA5P22460 613 aa21.61■■□□□ 1.05
NME3-204ENST00000563498 EPC2Q52LR7 807 aa21.61■■□□□ 1.05
NME3-204ENST00000563498 FAM178BQ8IXR5 827 aa21.61■■□□□ 1.05
NME3-204ENST00000563498 GADD45GIP1Q8TAE8 222 aaPredicted RBP21.61■■□□□ 1.05
NME3-204ENST00000563498 SPATA31C2B4DYI2 1134 aa21.6■■□□□ 1.05
NME3-204ENST00000563498 CYTH3O43739 400 aa21.6■■□□□ 1.05
NME3-204ENST00000563498 HOXD11P31277 338 aaPredicted RBP21.6■■□□□ 1.05
NME3-204ENST00000563498 MRPS9P82933 396 aaKnown RBP21.6■■□□□ 1.05
NME3-204ENST00000563498 TROAPQ12815 778 aa21.6■■□□□ 1.05
NME3-204ENST00000563498 PUS10Q3MIT2 529 aaKnown RBP21.6■■□□□ 1.05
NME3-204ENST00000563498 TIGD5Q53EQ6 642 aa21.6■■□□□ 1.05
NME3-204ENST00000563498 APBB2Q92870 758 aa21.6■■□□□ 1.05
NME3-204ENST00000563498 ZFP91Q96JP5 570 aaPredicted RBP21.6■■□□□ 1.05
NME3-204ENST00000563498 YME1L1Q96TA2 773 aa21.6■■□□□ 1.05
NME3-204ENST00000563498 U3KPZ7 1027 aaPredicted RBP21.6■■□□□ 1.05
NME3-204ENST00000563498 ERICH2A1L162 156 aa21.59■■□□□ 1.05
NME3-204ENST00000563498 H3BNC9 293 aa21.59■■□□□ 1.05
NME3-204ENST00000563498 FIBPO43427 364 aa21.59■■□□□ 1.05
NME3-204ENST00000563498 GJD3Q8N144 294 aa21.59■■□□□ 1.05
NME3-204ENST00000563498 GPR20Q99678 358 aa21.59■■□□□ 1.05
NME3-204ENST00000563498 BCAS3Q9H6U6 928 aa21.59■■□□□ 1.05
NME3-204ENST00000563498 ZNF215Q9UL58 517 aaPredicted RBP21.59■■□□□ 1.05
NME3-204ENST00000563498 IFIT3O14879 490 aaKnown RBP21.58■■□□□ 1.05
NME3-204ENST00000563498 FAM26DQ5JW98 314 aa21.58■■□□□ 1.05
NME3-204ENST00000563498 PTCRAQ6ISU1 281 aaPredicted RBP21.58■■□□□ 1.05
NME3-204ENST00000563498 CYFIP1Q7L576 1253 aa21.58■■□□□ 1.05
NME3-204ENST00000563498 NEK9Q8TD19 979 aa21.58■■□□□ 1.05
NME3-204ENST00000563498 LOC101059915A0A1B0GWI6 518 aaPredicted RBP21.57■■□□□ 1.04
NME3-204ENST00000563498 GRXCR2A6NFK2 248 aa21.57■■□□□ 1.04
NME3-204ENST00000563498 RBAK-RBAKDNI3L0D1 243 aa21.57■■□□□ 1.04
NME3-204ENST00000563498 CYP21A2P08686 494 aa21.57■■□□□ 1.04
NME3-204ENST00000563498 CTSHP09668 335 aa21.57■■□□□ 1.04
NME3-204ENST00000563498 ADAM17P78536 824 aa21.57■■□□□ 1.04
NME3-204ENST00000563498 SEMA3FQ13275 785 aa21.57■■□□□ 1.04
NME3-204ENST00000563498 SART3Q15020 963 aaKnown RBP21.57■■□□□ 1.04
NME3-204ENST00000563498 XRRA1Q6P2D8 792 aa21.57■■□□□ 1.04
NME3-204ENST00000563498 SENP7Q9BQF6 1050 aa21.57■■□□□ 1.04
NME3-204ENST00000563498 SETD4Q9NVD3 440 aa21.57■■□□□ 1.04
NME3-204ENST00000563498 IL9P15248 144 aa21.56■■□□□ 1.04
NME3-204ENST00000563498 GPM6BQ13491 265 aa21.56■■□□□ 1.04
NME3-204ENST00000563498 COL19A1Q14993 1142 aa21.56■■□□□ 1.04
NME3-204ENST00000563498 WTAPQ15007 396 aa21.56■■□□□ 1.04
NME3-204ENST00000563498 RALYLQ86SE5 291 aaKnown RBP21.56■■□□□ 1.04
NME3-204ENST00000563498 TMEM192Q8IY95 271 aa21.56■■□□□ 1.04
NME3-204ENST00000563498 BANK1Q8NDB2 785 aa21.56■■□□□ 1.04
NME3-204ENST00000563498 IFIH1Q9BYX4 1025 aaKnown RBP21.56■■□□□ 1.04
NME3-204ENST00000563498 OSBPL7Q9BZF2 842 aa21.56■■□□□ 1.04
NME3-204ENST00000563498 SENP2Q9HC62 589 aa21.56■■□□□ 1.04
NME3-204ENST00000563498 UPP2O95045 317 aa21.55■■□□□ 1.04
NME3-204ENST00000563498 PCNX4Q63HM2 1172 aa21.55■■□□□ 1.04
NME3-204ENST00000563498 CATIPQ7Z7H3 387 aa21.55■■□□□ 1.04
NME3-204ENST00000563498 RPAINQ86UA6 219 aa21.55■■□□□ 1.04
NME3-204ENST00000563498 NCOA7Q8NI08 942 aa21.55■■□□□ 1.04
NME3-204ENST00000563498 LMBR1Q8WVP7 490 aa21.55■■□□□ 1.04
NME3-204ENST00000563498 RUFY2Q8WXA3 655 aa21.55■■□□□ 1.04
NME3-204ENST00000563498 PABPC5Q96DU9 382 aaKnown RBP21.55■■□□□ 1.04
NME3-204ENST00000563498 RTEL1Q9NZ71 1219 aa21.55■■□□□ 1.04
NME3-204ENST00000563498 NRCAMQ92823 1304 aa21.55■■□□□ 1.04
NME3-204ENST00000563498 BAZ2BQ9UIF8 2168 aaKnown RBP21.54■■□□□ 1.04
NME3-204ENST00000563498 RALGAPA2Q2PPJ7 1873 aa21.54■■□□□ 1.04
NME3-204ENST00000563498 FAM86C2PA6NEL3 165 aa21.54■■□□□ 1.04
NME3-204ENST00000563498 PRR33A8MZF0 331 aa21.54■■□□□ 1.04
NME3-204ENST00000563498 PIK3CDO00329 1044 aa21.54■■□□□ 1.04
NME3-204ENST00000563498 ALADP13716 330 aa21.54■■□□□ 1.04
NME3-204ENST00000563498 TRIM50Q86XT4 487 aa21.54■■□□□ 1.04
NME3-204ENST00000563498 GIMAP8Q8ND71 665 aaPredicted RBP21.54■■□□□ 1.04
NME3-204ENST00000563498 MAP3K14Q99558 947 aa21.54■■□□□ 1.04
NME3-204ENST00000563498 NSUN3Q9H649 340 aaKnown RBP21.54■■□□□ 1.04
NME3-204ENST00000563498 E7EWF7 191 aa21.53■■□□□ 1.04
NME3-204ENST00000563498 GSPT1P15170 499 aaKnown RBP21.53■■□□□ 1.04
NME3-204ENST00000563498 SMARCA1P28370 1054 aa21.53■■□□□ 1.04
NME3-204ENST00000563498 SSTR3P32745 418 aaPredicted RBP21.53■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms