RNA–Protein interactions for RNA: ENST00000563255.1

CDH11-207, Transcript of cadherin 11, humanhuman

TSL 5

Gene CDH11, Length 545 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-207ENST00000563255 MSH4O15457 936 aa16.66■□□□□ 0.26
CDH11-207ENST00000563255 EVI5O60447 810 aa16.66■□□□□ 0.26
CDH11-207ENST00000563255 ARP10275 920 aa16.66■□□□□ 0.26
CDH11-207ENST00000563255 ICAM3P32942 547 aa16.66■□□□□ 0.26
CDH11-207ENST00000563255 FXR2P51116 673 aaKnown RBP eCLIP16.66■□□□□ 0.26
CDH11-207ENST00000563255 MTMR1Q13613 665 aa16.66■□□□□ 0.26
CDH11-207ENST00000563255 PDIA5Q14554 519 aa16.66■□□□□ 0.26
CDH11-207ENST00000563255 GNPTABQ3T906 1256 aa16.66■□□□□ 0.26
CDH11-207ENST00000563255 NPLOC4Q8TAT6 608 aa16.66■□□□□ 0.26
CDH11-207ENST00000563255 ZFP91Q96JP5 570 aaPredicted RBP16.66■□□□□ 0.26
CDH11-207ENST00000563255 WDR11Q9BZH6 1224 aa16.66■□□□□ 0.26
CDH11-207ENST00000563255 KCNH7Q9NS40 1196 aa16.66■□□□□ 0.26
CDH11-207ENST00000563255 PCDHA12Q9UN75 941 aa16.66■□□□□ 0.26
CDH11-207ENST00000563255 MARCH6O60337 910 aa16.65■□□□□ 0.26
CDH11-207ENST00000563255 RGS20O76081 388 aa16.65■□□□□ 0.26
CDH11-207ENST00000563255 XRCC5P13010 732 aaKnown RBP16.65■□□□□ 0.26
CDH11-207ENST00000563255 CAPN2P17655 700 aa16.65■□□□□ 0.26
CDH11-207ENST00000563255 LONP1P36776 959 aaKnown RBP16.65■□□□□ 0.26
CDH11-207ENST00000563255 TXKP42681 527 aa16.65■□□□□ 0.26
CDH11-207ENST00000563255 IL17AQ16552 155 aa16.65■□□□□ 0.26
CDH11-207ENST00000563255 TMEM266Q2M3C6 531 aa16.65■□□□□ 0.26
CDH11-207ENST00000563255 ARMCX2Q7L311 632 aa16.65■□□□□ 0.26
CDH11-207ENST00000563255 SLC17A8Q8NDX2 589 aa16.65■□□□□ 0.26
CDH11-207ENST00000563255 SLC5A5Q92911 643 aa16.65■□□□□ 0.26
CDH11-207ENST00000563255 PAWRQ96IZ0 340 aaKnown RBP16.65■□□□□ 0.26
CDH11-207ENST00000563255 AK8Q96MA6 479 aa16.65■□□□□ 0.26
CDH11-207ENST00000563255 TTC12Q9H892 705 aaPredicted RBP16.65■□□□□ 0.26
CDH11-207ENST00000563255 AGO4Q9HCK5 861 aaKnown RBP16.65■□□□□ 0.26
CDH11-207ENST00000563255 PAK6Q9NQU5 681 aaPredicted RBP16.65■□□□□ 0.26
CDH11-207ENST00000563255 COL6A3P12111 3177 aa16.65■□□□□ 0.26
CDH11-207ENST00000563255 SYNGAP1Q96PV0 1343 aa16.65■□□□□ 0.26
CDH11-207ENST00000563255 VWA3AA6NCI4 1184 aa16.64■□□□□ 0.25
CDH11-207ENST00000563255 SPATA31C2B4DYI2 1134 aa16.64■□□□□ 0.25
CDH11-207ENST00000563255 IPO5O00410 1097 aaKnown RBP16.64■□□□□ 0.25
CDH11-207ENST00000563255 DLL1O00548 723 aa16.64■□□□□ 0.25
CDH11-207ENST00000563255 GADD45BO75293 160 aaPredicted RBP16.64■□□□□ 0.25
CDH11-207ENST00000563255 TGFB3P10600 412 aa16.64■□□□□ 0.25
CDH11-207ENST00000563255 CMA1P23946 247 aa16.64■□□□□ 0.25
CDH11-207ENST00000563255 GRIN1Q05586 938 aa16.64■□□□□ 0.25
CDH11-207ENST00000563255 OLFML2BQ68BL8 750 aa16.64■□□□□ 0.25
CDH11-207ENST00000563255 KCNV1Q6PIU1 500 aa16.64■□□□□ 0.25
CDH11-207ENST00000563255 IGSF22Q8N9C0 903 aa16.64■□□□□ 0.25
CDH11-207ENST00000563255 CLIC6Q96NY7 704 aa16.64■□□□□ 0.25
CDH11-207ENST00000563255 RIT2Q99578 217 aa16.64■□□□□ 0.25
CDH11-207ENST00000563255 APBA2Q99767 749 aa16.64■□□□□ 0.25
CDH11-207ENST00000563255 TINF2Q9BSI4 451 aa16.64■□□□□ 0.25
CDH11-207ENST00000563255 ZNF577Q9BSK1 485 aa16.64■□□□□ 0.25
CDH11-207ENST00000563255 RAB34Q9BZG1 259 aa16.64■□□□□ 0.25
CDH11-207ENST00000563255 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.64■□□□□ 0.25
CDH11-207ENST00000563255 CSRNP2Q9H175 543 aa16.64■□□□□ 0.25
CDH11-207ENST00000563255 PSMD10O75832 226 aa16.63■□□□□ 0.25
CDH11-207ENST00000563255 IGHA2P01877 340 aa16.63■□□□□ 0.25
CDH11-207ENST00000563255 CYP2B6P20813 491 aa16.63■□□□□ 0.25
CDH11-207ENST00000563255 TECP42680 631 aa16.63■□□□□ 0.25
CDH11-207ENST00000563255 SEMA3FQ13275 785 aa16.63■□□□□ 0.25
CDH11-207ENST00000563255 RESP18Q5W5W9 173 aa16.63■□□□□ 0.25
CDH11-207ENST00000563255 CRISPLD2Q9H0B8 497 aa16.63■□□□□ 0.25
CDH11-207ENST00000563255 VTA1Q9NP79 307 aa16.63■□□□□ 0.25
CDH11-207ENST00000563255 TBC1D22BQ9NU19 505 aa16.63■□□□□ 0.25
CDH11-207ENST00000563255 NFASCO94856 1347 aa16.63■□□□□ 0.25
CDH11-207ENST00000563255 FAM237AA0A1B0GTK4 181 aa16.62■□□□□ 0.25
CDH11-207ENST00000563255 RBM47A0AV96 593 aaKnown RBP16.62■□□□□ 0.25
CDH11-207ENST00000563255 SNAI1O95863 264 aaPredicted RBP16.62■□□□□ 0.25
CDH11-207ENST00000563255 HMGCRP04035 888 aa16.62■□□□□ 0.25
CDH11-207ENST00000563255 LRCH2Q5VUJ6 765 aa16.62■□□□□ 0.25
CDH11-207ENST00000563255 SHC4Q6S5L8 630 aa16.62■□□□□ 0.25
CDH11-207ENST00000563255 NECAB2Q7Z6G3 386 aa16.62■□□□□ 0.25
CDH11-207ENST00000563255 TRMT44Q8IYL2 757 aaKnown RBP16.62■□□□□ 0.25
CDH11-207ENST00000563255 MRPS27Q92552 414 aaKnown RBP16.62■□□□□ 0.25
CDH11-207ENST00000563255 SENP7Q9BQF6 1050 aa16.62■□□□□ 0.25
CDH11-207ENST00000563255 ABHD16BQ9H3Z7 469 aa16.62■□□□□ 0.25
CDH11-207ENST00000563255 HMX1Q9NP08 348 aaPredicted RBP16.62■□□□□ 0.25
CDH11-207ENST00000563255 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.62■□□□□ 0.25
CDH11-207ENST00000563255 STK24Q9Y6E0 443 aa16.62■□□□□ 0.25
CDH11-207ENST00000563255 DDX49Q9Y6V7 483 aaKnown RBP16.62■□□□□ 0.25
CDH11-207ENST00000563255 SOX1O00570 391 aaPredicted RBP16.61■□□□□ 0.25
CDH11-207ENST00000563255 DHX15O43143 795 aaKnown RBP16.61■□□□□ 0.25
CDH11-207ENST00000563255 GAS7O60861 476 aa16.61■□□□□ 0.25
CDH11-207ENST00000563255 ATP9AO75110 1047 aa16.61■□□□□ 0.25
CDH11-207ENST00000563255 KCNA2P16389 499 aa16.61■□□□□ 0.25
CDH11-207ENST00000563255 SPIRE1Q08AE8 756 aa16.61■□□□□ 0.25
CDH11-207ENST00000563255 TRIM32Q13049 653 aa16.61■□□□□ 0.25
CDH11-207ENST00000563255 PPP2R5CQ13362 524 aa16.61■□□□□ 0.25
CDH11-207ENST00000563255 B3GNT9Q6UX72 402 aa16.61■□□□□ 0.25
CDH11-207ENST00000563255 SEPT14Q6ZU15 432 aa16.61■□□□□ 0.25
CDH11-207ENST00000563255 GIMAP8Q8ND71 665 aaPredicted RBP16.61■□□□□ 0.25
CDH11-207ENST00000563255 DIS3LQ8TF46 1054 aaKnown RBP16.61■□□□□ 0.25
CDH11-207ENST00000563255 GJA10Q969M2 543 aa16.61■□□□□ 0.25
CDH11-207ENST00000563255 LRCH3Q96II8 777 aa16.61■□□□□ 0.25
CDH11-207ENST00000563255 TEKT3Q9BXF9 490 aa16.61■□□□□ 0.25
CDH11-207ENST00000563255 CCSER1Q9C0I3 900 aa16.61■□□□□ 0.25
CDH11-207ENST00000563255 KATNBL1Q9H079 304 aa16.61■□□□□ 0.25
CDH11-207ENST00000563255 PRO3102Q9H379 93 aa16.61■□□□□ 0.25
CDH11-207ENST00000563255 FAM13BQ9NYF5 915 aa16.61■□□□□ 0.25
CDH11-207ENST00000563255 LRWD1Q9UFC0 647 aa16.61■□□□□ 0.25
CDH11-207ENST00000563255 VAV3Q9UKW4 847 aa16.61■□□□□ 0.25
CDH11-207ENST00000563255 LAMA3Q16787 3333 aa16.6■□□□□ 0.25
CDH11-207ENST00000563255 MBD3O95983 291 aa16.6■□□□□ 0.25
CDH11-207ENST00000563255 ITGB3BPQ13352 177 aaPredicted RBP16.6■□□□□ 0.25
CDH11-207ENST00000563255 SKOR2Q2VWA4 1001 aaPredicted RBP16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms