RNA–Protein interactions for RNA: ENST00000562199.1

CAPN3-211, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 385 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-211ENST00000562199 PMLP29590 882 aa6.17□□□□□ -1.42
CAPN3-211ENST00000562199 WEE1P30291 646 aa6.17□□□□□ -1.42
CAPN3-211ENST00000562199 MATR3P43243 847 aaKnown RBP eCLIP6.17□□□□□ -1.42
CAPN3-211ENST00000562199 USP11P51784 963 aa6.17□□□□□ -1.42
CAPN3-211ENST00000562199 RIPK4P57078 832 aa6.17□□□□□ -1.42
CAPN3-211ENST00000562199 AP2B1P63010 937 aa6.17□□□□□ -1.42
CAPN3-211ENST00000562199 NUCB2P80303 420 aa6.17□□□□□ -1.42
CAPN3-211ENST00000562199 DPYDQ12882 1025 aa6.17□□□□□ -1.42
CAPN3-211ENST00000562199 TBX2Q13207 712 aaPredicted RBP6.17□□□□□ -1.42
CAPN3-211ENST00000562199 MLC1Q15049 377 aa6.17□□□□□ -1.42
CAPN3-211ENST00000562199 SYCP1Q15431 976 aa6.17□□□□□ -1.42
CAPN3-211ENST00000562199 GNPTABQ3T906 1256 aa6.17□□□□□ -1.42
CAPN3-211ENST00000562199 CRTC2Q53ET0 693 aaPredicted RBP6.17□□□□□ -1.42
CAPN3-211ENST00000562199 AKNAD1Q5T1N1 836 aa6.17□□□□□ -1.42
CAPN3-211ENST00000562199 FAM117BQ6P1L5 589 aa6.17□□□□□ -1.42
CAPN3-211ENST00000562199 C20orf204Q6ZNR8 217 aa6.17□□□□□ -1.42
CAPN3-211ENST00000562199 ARHGEF18Q6ZSZ5 1173 aa6.17□□□□□ -1.42
CAPN3-211ENST00000562199 RUFY3Q7L099 469 aa6.17□□□□□ -1.42
CAPN3-211ENST00000562199 TMC4Q7Z404 712 aa6.17□□□□□ -1.42
CAPN3-211ENST00000562199 SDCCAG8Q86SQ7 713 aaPredicted RBP6.17□□□□□ -1.42
CAPN3-211ENST00000562199 GLYCTKQ8IVS8 523 aa6.17□□□□□ -1.42
CAPN3-211ENST00000562199 SLC44A2Q8IWA5 706 aaPredicted RBP6.17□□□□□ -1.42
CAPN3-211ENST00000562199 VPS52Q8N1B4 723 aa6.17□□□□□ -1.42
CAPN3-211ENST00000562199 LRRC43Q8N309 656 aa6.17□□□□□ -1.42
CAPN3-211ENST00000562199 CCDC26Q8TAB7 109 aa6.17□□□□□ -1.42
CAPN3-211ENST00000562199 RABGGTAQ92696 567 aa6.17□□□□□ -1.42
CAPN3-211ENST00000562199 STRBPQ96SI9 672 aaKnown RBP6.17□□□□□ -1.42
CAPN3-211ENST00000562199 CRACR2AQ9BSW2 395 aa6.17□□□□□ -1.42
CAPN3-211ENST00000562199 ALG1Q9BT22 464 aa6.17□□□□□ -1.42
CAPN3-211ENST00000562199 KCNQ5Q9NR82 932 aa6.17□□□□□ -1.42
CAPN3-211ENST00000562199 TPSG1Q9NRR2 321 aa6.17□□□□□ -1.42
CAPN3-211ENST00000562199 VTI1BQ9UEU0 232 aa6.17□□□□□ -1.42
CAPN3-211ENST00000562199 TRIM17Q9Y577 477 aa6.17□□□□□ -1.42
CAPN3-211ENST00000562199 PCDHGC5Q9Y5F6 944 aa6.17□□□□□ -1.42
CAPN3-211ENST00000562199 PCDHGB3Q9Y5G1 929 aa6.17□□□□□ -1.42
CAPN3-211ENST00000562199 REREQ9P2R6 1566 aa6.16□□□□□ -1.42
CAPN3-211ENST00000562199 KIF2AO00139 706 aaPredicted RBP6.16□□□□□ -1.42
CAPN3-211ENST00000562199 EIF3FO00303 357 aaPredicted RBP6.16□□□□□ -1.42
CAPN3-211ENST00000562199 ZSCAN9O15535 394 aaPredicted RBP6.16□□□□□ -1.42
CAPN3-211ENST00000562199 PLOD3O60568 738 aa6.16□□□□□ -1.42
CAPN3-211ENST00000562199 LILRB5O75023 590 aa6.16□□□□□ -1.42
CAPN3-211ENST00000562199 TBCAO75347 108 aaKnown RBP6.16□□□□□ -1.42
CAPN3-211ENST00000562199 STAMBPO95630 424 aa6.16□□□□□ -1.42
CAPN3-211ENST00000562199 CYP17A1P05093 508 aa6.16□□□□□ -1.42
CAPN3-211ENST00000562199 CNGA1P29973 690 aa6.16□□□□□ -1.42
CAPN3-211ENST00000562199 MCM4P33991 863 aa6.16□□□□□ -1.42
CAPN3-211ENST00000562199 GALNSP34059 522 aa6.16□□□□□ -1.42
CAPN3-211ENST00000562199 CD86P42081 329 aa6.16□□□□□ -1.42
CAPN3-211ENST00000562199 SKIV2L2P42285 1042 aaKnown RBP6.16□□□□□ -1.42
CAPN3-211ENST00000562199 PDE6CP51160 858 aa6.16□□□□□ -1.42
CAPN3-211ENST00000562199 LIMK1P53667 647 aa6.16□□□□□ -1.42
CAPN3-211ENST00000562199 PRKG2Q13237 762 aa6.16□□□□□ -1.42
CAPN3-211ENST00000562199 PICALMQ13492 652 aa6.16□□□□□ -1.42
CAPN3-211ENST00000562199 PLCB4Q15147 1175 aa6.16□□□□□ -1.42
CAPN3-211ENST00000562199 CLPPQ16740 277 aaPredicted RBP6.16□□□□□ -1.42
CAPN3-211ENST00000562199 BTNL9Q6UXG8 535 aa6.16□□□□□ -1.42
CAPN3-211ENST00000562199 RAPH1Q70E73 1250 aa6.16□□□□□ -1.42
CAPN3-211ENST00000562199 CEP68Q76N32 757 aa6.16□□□□□ -1.42
CAPN3-211ENST00000562199 LURAP1LQ8IV03 231 aa6.16□□□□□ -1.42
CAPN3-211ENST00000562199 TCEAL8Q8IYN2 117 aa6.16□□□□□ -1.42
CAPN3-211ENST00000562199 RNF168Q8IYW5 571 aaPredicted RBP6.16□□□□□ -1.42
CAPN3-211ENST00000562199 RTKN2Q8IZC4 609 aa6.16□□□□□ -1.42
CAPN3-211ENST00000562199 SLC7A5P1Q8MH63 180 aa6.16□□□□□ -1.42
CAPN3-211ENST00000562199 CARNMT1Q8N4J0 409 aa6.16□□□□□ -1.42
CAPN3-211ENST00000562199 TAB3Q8N5C8 712 aaPredicted RBP6.16□□□□□ -1.42
CAPN3-211ENST00000562199 LSMEM1Q8N8F7 131 aa6.16□□□□□ -1.42
CAPN3-211ENST00000562199 IL17REQ8NFR9 667 aa6.16□□□□□ -1.42
CAPN3-211ENST00000562199 GOLGA5Q8TBA6 731 aa6.16□□□□□ -1.42
CAPN3-211ENST00000562199 MGARPQ8TDB4 240 aa6.16□□□□□ -1.42
CAPN3-211ENST00000562199 NUP133Q8WUM0 1156 aa6.16□□□□□ -1.42
CAPN3-211ENST00000562199 TEKT4Q8WW24 435 aa6.16□□□□□ -1.42
CAPN3-211ENST00000562199 HPS3Q969F9 1004 aa6.16□□□□□ -1.42
CAPN3-211ENST00000562199 C8orf76Q96K31 380 aa6.16□□□□□ -1.42
CAPN3-211ENST00000562199 PNMA5Q96PV4 448 aa6.16□□□□□ -1.42
CAPN3-211ENST00000562199 DEPDC7Q96QD5 511 aa6.16□□□□□ -1.42
CAPN3-211ENST00000562199 EIF2AK1Q9BQI3 630 aaKnown RBP6.16□□□□□ -1.42
CAPN3-211ENST00000562199 GSX2Q9BZM3 304 aa6.16□□□□□ -1.42
CAPN3-211ENST00000562199 SLC13A1Q9BZW2 595 aa6.16□□□□□ -1.42
CAPN3-211ENST00000562199 SEMA4AQ9H3S1 761 aa6.16□□□□□ -1.42
CAPN3-211ENST00000562199 KIAA1586Q9HCI6 787 aa6.16□□□□□ -1.42
CAPN3-211ENST00000562199 JPH1Q9HDC5 661 aaPredicted RBP6.16□□□□□ -1.42
CAPN3-211ENST00000562199 PRDM6Q9NQX0 595 aa6.16□□□□□ -1.42
CAPN3-211ENST00000562199 RASSF1Q9NS23 344 aa6.16□□□□□ -1.42
CAPN3-211ENST00000562199 UBAP1Q9NZ09 502 aa6.16□□□□□ -1.42
CAPN3-211ENST00000562199 SLC6A14Q9UN76 642 aa6.16□□□□□ -1.42
CAPN3-211ENST00000562199 TRAF3IP3Q9Y228 551 aa6.16□□□□□ -1.42
CAPN3-211ENST00000562199 MROH1Q8NDA8 1641 aa6.16□□□□□ -1.42
CAPN3-211ENST00000562199 MROH2AA6NES4 1674 aa6.16□□□□□ -1.42
CAPN3-211ENST00000562199 PLCH2O75038 1416 aa6.16□□□□□ -1.42
CAPN3-211ENST00000562199 ZNF518AQ6AHZ1 1483 aa6.15□□□□□ -1.42
CAPN3-211ENST00000562199 EFCAB6Q5THR3 1501 aa6.15□□□□□ -1.42
CAPN3-211ENST00000562199 CFAP74Q9C0B2 1584 aa6.15□□□□□ -1.42
CAPN3-211ENST00000562199 QRICH2Q9H0J4 1663 aa6.15□□□□□ -1.42
CAPN3-211ENST00000562199 SYNDIG1LA6NDD5 238 aa6.15□□□□□ -1.42
CAPN3-211ENST00000562199 PLOD2O00469 737 aa6.15□□□□□ -1.42
CAPN3-211ENST00000562199 DYNC1I1O14576 645 aa6.15□□□□□ -1.42
CAPN3-211ENST00000562199 PRPF3O43395 683 aaKnown RBP6.15□□□□□ -1.42
CAPN3-211ENST00000562199 TADA3O75528 432 aa6.15□□□□□ -1.42
CAPN3-211ENST00000562199 CNOT4O95628 575 aaKnown RBP6.15□□□□□ -1.42
CAPN3-211ENST00000562199 CAPN3P20807 821 aa6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms