RNA–Protein interactions for RNA: ENST00000562011.1

CTU2-203, Transcript of cytosolic thiouridylase subunit 2, humanhuman

TSL 2

Gene CTU2, Length 324 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTU2-203ENST00000562011 RSPH10BP0C881 870 aa16.56■□□□□ 0.24
CTU2-203ENST00000562011 SMIM10L2AP0DMW4 78 aa16.56■□□□□ 0.24
CTU2-203ENST00000562011 SMIM10L2BP0DMW5 78 aa16.56■□□□□ 0.24
CTU2-203ENST00000562011 HOXC8P31273 242 aa16.56■□□□□ 0.24
CTU2-203ENST00000562011 TRDNQ13061 729 aa16.56■□□□□ 0.24
CTU2-203ENST00000562011 COL9A3Q14050 684 aaPredicted RBP16.56■□□□□ 0.24
CTU2-203ENST00000562011 WTAPQ15007 396 aa16.56■□□□□ 0.24
CTU2-203ENST00000562011 TRIM50Q86XT4 487 aa16.56■□□□□ 0.24
CTU2-203ENST00000562011 SAMD3Q8N6K7 520 aa16.56■□□□□ 0.24
CTU2-203ENST00000562011 ATP6V0A1Q93050 837 aa16.56■□□□□ 0.24
CTU2-203ENST00000562011 TGS1Q96RS0 853 aaKnown RBP16.56■□□□□ 0.24
CTU2-203ENST00000562011 MYL10Q9BUA6 226 aa16.56■□□□□ 0.24
CTU2-203ENST00000562011 EPHX3Q9H6B9 360 aa16.56■□□□□ 0.24
CTU2-203ENST00000562011 TUT1Q9H6E5 874 aaKnown RBP16.56■□□□□ 0.24
CTU2-203ENST00000562011 SUPT16HQ9Y5B9 1047 aaKnown RBP16.56■□□□□ 0.24
CTU2-203ENST00000562011 BRWD1Q9NSI6 2320 aa16.55■□□□□ 0.24
CTU2-203ENST00000562011 CTSHP09668 335 aa16.55■□□□□ 0.24
CTU2-203ENST00000562011 TGFB3P10600 412 aa16.55■□□□□ 0.24
CTU2-203ENST00000562011 CYFIP1Q7L576 1253 aa16.55■□□□□ 0.24
CTU2-203ENST00000562011 MYOCDQ8IZQ8 938 aa16.55■□□□□ 0.24
CTU2-203ENST00000562011 IGDCC4Q8TDY8 1250 aa16.55■□□□□ 0.24
CTU2-203ENST00000562011 INPP4AQ96PE3 977 aaPredicted RBP16.55■□□□□ 0.24
CTU2-203ENST00000562011 SETD4Q9NVD3 440 aa16.55■□□□□ 0.24
CTU2-203ENST00000562011 U3KPZ7 1027 aaPredicted RBP16.55■□□□□ 0.24
CTU2-203ENST00000562011 FRMPD4Q14CM0 1322 aa16.54■□□□□ 0.24
CTU2-203ENST00000562011 SPATA31C2B4DYI2 1134 aa16.54■□□□□ 0.24
CTU2-203ENST00000562011 PLEKHG4Q58EX7 1191 aa16.54■□□□□ 0.24
CTU2-203ENST00000562011 USP17L6PQ6QN14 398 aa16.54■□□□□ 0.24
CTU2-203ENST00000562011 RALYLQ86SE5 291 aaKnown RBP16.54■□□□□ 0.24
CTU2-203ENST00000562011 NCOA7Q8NI08 942 aa16.54■□□□□ 0.24
CTU2-203ENST00000562011 CD320Q9NPF0 282 aa16.54■□□□□ 0.24
CTU2-203ENST00000562011 NLRC5Q86WI3 1866 aa16.53■□□□□ 0.24
CTU2-203ENST00000562011 ERICH2A1L162 156 aa16.53■□□□□ 0.24
CTU2-203ENST00000562011 EFCAB14O75071 495 aa16.53■□□□□ 0.24
CTU2-203ENST00000562011 ICAM3P32942 547 aa16.53■□□□□ 0.24
CTU2-203ENST00000562011 HTRA4P83105 476 aaPredicted RBP16.53■□□□□ 0.24
CTU2-203ENST00000562011 SP4Q02446 784 aa16.53■□□□□ 0.24
CTU2-203ENST00000562011 MB21D2Q8IYB1 491 aaPredicted RBP16.53■□□□□ 0.24
CTU2-203ENST00000562011 GPR20Q99678 358 aa16.53■□□□□ 0.24
CTU2-203ENST00000562011 LMCD1Q9NZU5 365 aa16.53■□□□□ 0.24
CTU2-203ENST00000562011 EMSYQ7Z589 1322 aa16.52■□□□□ 0.24
CTU2-203ENST00000562011 LOC101059915A0A1B0GWI6 518 aaPredicted RBP16.52■□□□□ 0.24
CTU2-203ENST00000562011 NOP56O00567 594 aaKnown RBP16.52■□□□□ 0.24
CTU2-203ENST00000562011 SGSM2O43147 1006 aa16.52■□□□□ 0.24
CTU2-203ENST00000562011 UPP2O95045 317 aa16.52■□□□□ 0.24
CTU2-203ENST00000562011 AMHP03971 560 aa16.52■□□□□ 0.24
CTU2-203ENST00000562011 IRX6P78412 446 aaPredicted RBP16.52■□□□□ 0.24
CTU2-203ENST00000562011 UTP14CQ5TAP6 766 aaKnown RBP16.52■□□□□ 0.24
CTU2-203ENST00000562011 CATIPQ7Z7H3 387 aa16.52■□□□□ 0.24
CTU2-203ENST00000562011 CMTR1Q8N1G2 835 aaKnown RBP16.52■□□□□ 0.24
CTU2-203ENST00000562011 FBXO22Q8NEZ5 403 aa16.52■□□□□ 0.24
CTU2-203ENST00000562011 LY9Q9HBG7 655 aa16.52■□□□□ 0.24
CTU2-203ENST00000562011 INSL6Q9Y581 213 aa16.52■□□□□ 0.24
CTU2-203ENST00000562011 ATG2AQ2TAZ0 1938 aa16.51■□□□□ 0.23
CTU2-203ENST00000562011 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.51■□□□□ 0.23
CTU2-203ENST00000562011 MEIS2O14770 477 aa16.51■□□□□ 0.23
CTU2-203ENST00000562011 PLEKHA8P1O95397 391 aa16.51■□□□□ 0.23
CTU2-203ENST00000562011 ADAM17P78536 824 aa16.51■□□□□ 0.23
CTU2-203ENST00000562011 TRAF1Q13077 416 aa16.51■□□□□ 0.23
CTU2-203ENST00000562011 GNPTABQ3T906 1256 aa16.51■□□□□ 0.23
CTU2-203ENST00000562011 METTL7BQ6UX53 244 aa16.51■□□□□ 0.23
CTU2-203ENST00000562011 ZNF654Q8IZM8 581 aa16.51■□□□□ 0.23
CTU2-203ENST00000562011 SP7Q8TDD2 431 aaPredicted RBP16.51■□□□□ 0.23
CTU2-203ENST00000562011 RUFY2Q8WXA3 655 aa16.51■□□□□ 0.23
CTU2-203ENST00000562011 MAP4K1Q92918 833 aa16.51■□□□□ 0.23
CTU2-203ENST00000562011 USP26Q9BXU7 913 aa16.51■□□□□ 0.23
CTU2-203ENST00000562011 UBE2ZQ9H832 354 aaPredicted RBP16.51■□□□□ 0.23
CTU2-203ENST00000562011 RBM8AQ9Y5S9 174 aaKnown RBP16.51■□□□□ 0.23
CTU2-203ENST00000562011 hCG_1642624A0A1W2PR95 340 aa16.5■□□□□ 0.23
CTU2-203ENST00000562011 FIBPO43427 364 aa16.5■□□□□ 0.23
CTU2-203ENST00000562011 RXRAP19793 462 aa16.5■□□□□ 0.23
CTU2-203ENST00000562011 NEDD9Q14511 834 aa16.5■□□□□ 0.23
CTU2-203ENST00000562011 SART3Q15020 963 aaKnown RBP16.5■□□□□ 0.23
CTU2-203ENST00000562011 EPC2Q52LR7 807 aa16.5■□□□□ 0.23
CTU2-203ENST00000562011 RAB11FIP4Q86YS3 637 aa16.5■□□□□ 0.23
CTU2-203ENST00000562011 SMARCC2Q8TAQ2 1214 aa16.5■□□□□ 0.23
CTU2-203ENST00000562011 LMBR1Q8WVP7 490 aa16.5■□□□□ 0.23
CTU2-203ENST00000562011 SEPT8Q92599 483 aa16.5■□□□□ 0.23
CTU2-203ENST00000562011 TOP1MTQ969P6 601 aa16.5■□□□□ 0.23
CTU2-203ENST00000562011 LRFN3Q9BTN0 628 aa16.5■□□□□ 0.23
CTU2-203ENST00000562011 SPZ1Q9BXG8 430 aa16.5■□□□□ 0.23
CTU2-203ENST00000562011 C1QTNF1Q9BXJ1 281 aa16.5■□□□□ 0.23
CTU2-203ENST00000562011 KAT6AQ92794 2004 aa16.5■□□□□ 0.23
CTU2-203ENST00000562011 ATP9AO75110 1047 aa16.49■□□□□ 0.23
CTU2-203ENST00000562011 STAM2O75886 525 aa16.49■□□□□ 0.23
CTU2-203ENST00000562011 KCNA5P22460 613 aa16.49■□□□□ 0.23
CTU2-203ENST00000562011 ARHGAP4P98171 946 aa16.49■□□□□ 0.23
CTU2-203ENST00000562011 PCNX4Q63HM2 1172 aa16.49■□□□□ 0.23
CTU2-203ENST00000562011 RUFY4Q6ZNE9 571 aa16.49■□□□□ 0.23
CTU2-203ENST00000562011 SRBD1Q8N5C6 995 aaKnown RBP16.49■□□□□ 0.23
CTU2-203ENST00000562011 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.49■□□□□ 0.23
CTU2-203ENST00000562011 RRP36Q96EU6 259 aaKnown RBP16.49■□□□□ 0.23
CTU2-203ENST00000562011 C11orf16Q9NQ32 467 aa16.49■□□□□ 0.23
CTU2-203ENST00000562011 FAM86C2PA6NEL3 165 aa16.48■□□□□ 0.23
CTU2-203ENST00000562011 PRC1O43663 620 aa16.48■□□□□ 0.23
CTU2-203ENST00000562011 CHRNA1P02708 482 aa16.48■□□□□ 0.23
CTU2-203ENST00000562011 ZBTB10Q96DT7 871 aa16.48■□□□□ 0.23
CTU2-203ENST00000562011 YME1L1Q96TA2 773 aa16.48■□□□□ 0.23
CTU2-203ENST00000562011 PKD2L1Q9P0L9 805 aa16.48■□□□□ 0.23
CTU2-203ENST00000562011 IL9P15248 144 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms